#------------------------------------------------------------------------------ #$Date: 2012-02-26 04:10:06 +0200 (Sun, 26 Feb 2012) $ #$Revision: 35435 $ #$URL: file:///home/coder/svn-repositories/cod/cif/1/1502116.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_1502116 loop_ _publ_author_name 'Morohashi, Naoya' 'Noji, Shintaro' 'Nakayama, Hiroko' 'Kudo, Yasutaka' 'Tanaka, Shinya' 'Kabuto, Chizuko' 'Hattori, Tetsutaro' _publ_section_title ; Unique inclusion properties of crystalline powder p-tert-butylthiacalix[4]arene toward alcohols and carboxylic acids. ; _journal_issue 13 _journal_name_full 'Organic letters' _journal_page_first 3292 _journal_page_last 3295 _journal_volume 13 _journal_year 2011 _chemical_formula_sum 'C42 H52 O6 S4' _chemical_formula_weight 781.08 _chemical_name_systematic ; ? ; _space_group_IT_number 129 _symmetry_cell_setting tetragonal _symmetry_space_group_name_Hall '-P 4a 2a' _symmetry_space_group_name_H-M 'P 4/n m m :2' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 15.8002(7) _cell_length_b 15.8002(7) _cell_length_c 8.3491(7) _cell_measurement_reflns_used 5375 _cell_measurement_temperature 223(2) _cell_measurement_theta_max 27.61 _cell_measurement_theta_min 2.44 _cell_volume 2084.3(2) _computing_cell_refinement 'Bruker SMART' _computing_data_collection 'Bruker APEXII' _computing_data_reduction 'Bruker SAINT' _computing_molecular_graphics 'Yadokari-XG 2009 (Wakita Nemoto et al., 2009)' _computing_publication_material 'Yadokari-XG 2009 (Wakita,Nemoto et al., 2009)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'Bruker SHELXTL' _diffrn_ambient_temperature 223(2) _diffrn_detector_area_resol_mean 8.333 _diffrn_measured_fraction_theta_full 0.996 _diffrn_measured_fraction_theta_max 0.996 _diffrn_measurement_device_type 'Bruker APEX-II CCD' _diffrn_measurement_method 'phi and omega scans' _diffrn_radiation_monochromator 'Bruker Helios multilayered confocal mirror' _diffrn_radiation_source 'Bruker TXS fine-focus rotating anode' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0223 _diffrn_reflns_av_sigmaI/netI 0.0127 _diffrn_reflns_limit_h_max 20 _diffrn_reflns_limit_h_min -18 _diffrn_reflns_limit_k_max 15 _diffrn_reflns_limit_k_min -20 _diffrn_reflns_limit_l_max 10 _diffrn_reflns_limit_l_min -9 _diffrn_reflns_number 11175 _diffrn_reflns_theta_full 27.49 _diffrn_reflns_theta_max 27.49 _diffrn_reflns_theta_min 1.82 _exptl_absorpt_coefficient_mu 0.272 _exptl_absorpt_correction_T_max 1.0 _exptl_absorpt_correction_T_min 0.882977 _exptl_absorpt_correction_type empirical _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.245 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 832 _exptl_crystal_size_max 0.2 _exptl_crystal_size_mid 0.2 _exptl_crystal_size_min 0.2 _refine_diff_density_max 1.066 _refine_diff_density_min -1.278 _refine_diff_density_rms 0.171 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.682 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 81 _refine_ls_number_reflns 1346 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.682 _refine_ls_R_factor_all 0.1124 _refine_ls_R_factor_gt 0.1050 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.2000P)^2^+0.0000P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.3192 _refine_ls_wR_factor_ref 0.3539 _reflns_number_gt 1140 _reflns_number_total 1346 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file ol200506p_si_002.cif _[local]_cod_data_source_block 2MeCO2H _[local]_cod_cif_authors_sg_H-M 'P 4/n m m' _cod_database_code 1502116 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y+1/2, z' 'x+1/2, -y, -z' '-x, y+1/2, -z' '-y, -x, -z' 'y+1/2, x+1/2, -z' 'y, -x+1/2, z' '-y+1/2, x, z' '-x, -y, -z' 'x-1/2, y-1/2, -z' '-x-1/2, y, z' 'x, -y-1/2, z' 'y, x, z' '-y-1/2, -x-1/2, z' '-y, x-1/2, -z' 'y-1/2, -x, -z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group S1 S 0.42438(4) 0.07562(4) 0.71868(16) 0.0604(6) Uani 1 2 d S . . C1 C 0.42501(19) 0.2500 0.6971(4) 0.0491(10) Uani 1 2 d S . . O1 O 0.3783(2) 0.2500 0.8327(4) 0.0605(9) Uani 1 2 d S . . C2 C 0.44880(15) 0.17366(16) 0.6240(3) 0.0511(8) Uani 1 1 d . . . C3 C 0.49145(19) 0.17521(17) 0.4808(4) 0.0604(9) Uani 1 1 d . . . H1 H 0.5071 0.1241 0.4342 0.072 Uiso 1 1 calc R . . C4 C 0.5559(6) 0.2500 0.2382(9) 0.097(2) Uani 1 2 d S . . C5 C 0.5122(3) 0.2500 0.4027(6) 0.0658(11) Uani 1 2 d S . . C6 C 0.2500 0.2500 0.2190(12) 0.109(6) Uani 1 8 d S . . C7 C 0.2500 0.2500 0.3862(11) 0.075(2) Uani 1 8 d S A . O2 O 0.315(3) 0.185(3) 0.195(6) 0.209(19) Uiso 0.25 2 d SP A 1 C8 C 0.5227(5) 0.1750(4) 0.1324(7) 0.138(3) Uani 1 1 d . . . H2 H 0.5514 0.1753 0.0311 0.208 Uiso 1 1 calc R . . H3 H 0.4629 0.1814 0.1152 0.208 Uiso 1 1 calc R . . H4 H 0.5333 0.1223 0.1861 0.208 Uiso 1 1 calc R . . C9A C 0.6417(10) 0.2275(10) 0.2433(19) 0.076(4) Uiso 0.25 1 d P . 2 O3 O 0.2500 0.2500 0.112(5) 0.256(11) Uiso 1 8 d S A 2 H5 H 0.353(4) 0.215(3) 0.867(7) 0.034(12) Uiso 0.50 1 d P . . C9B C 0.6431(11) 0.1839(11) 0.2676(18) 0.072(3) Uiso 0.25 1 d P . 1 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 S1 0.0536(7) 0.0536(7) 0.0741(10) 0.0133(3) -0.0133(3) 0.0089(3) C1 0.0427(19) 0.058(2) 0.0469(18) 0.000 -0.0110(11) 0.000 O1 0.0646(18) 0.0654(19) 0.0516(16) 0.000 -0.0014(13) 0.000 C2 0.0424(12) 0.0543(14) 0.0565(16) 0.0049(10) -0.0094(10) 0.0033(9) C3 0.0507(14) 0.0613(16) 0.0691(18) -0.0062(12) 0.0028(12) 0.0054(11) C4 0.089(4) 0.124(6) 0.077(3) 0.000 0.035(3) 0.000 C5 0.065(2) 0.070(2) 0.063(2) 0.000 0.0112(18) 0.000 C6 0.146(9) 0.146(9) 0.035(4) 0.000 0.000 0.000 C7 0.087(4) 0.087(4) 0.050(4) 0.000 0.000 0.000 C8 0.210(8) 0.123(4) 0.082(3) -0.006(3) 0.029(4) 0.029(4) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 C2 S1 C2 100.34(16) 14_665 . O1 C1 C2 120.71(17) . 12_565 O1 C1 C2 120.71(17) . . C2 C1 C2 118.6(3) 12_565 . C1 O1 H5 128(4) . . C3 C2 C1 119.7(3) . . C3 C2 S1 120.6(2) . . C1 C2 S1 119.8(2) . . C2 C3 C5 122.7(3) . . C2 C3 H1 118.7 . . C5 C3 H1 118.7 . . C9A C4 C9A 29.4(12) . 12_565 C9A C4 C5 114.1(10) . . C9A C4 C5 114.1(10) 12_565 . C9A C4 C8 98.6(7) . . C9A C4 C8 122.2(8) 12_565 . C5 C4 C8 110.6(4) . . C9A C4 C8 122.2(8) . 12_565 C9A C4 C8 98.6(7) 12_565 12_565 C5 C4 C8 110.6(4) . 12_565 C8 C4 C8 98.1(7) . 12_565 C9A C4 C9B 52.0(10) . 12_565 C9A C4 C9B 23.3(7) 12_565 12_565 C5 C4 C9B 103.3(7) . 12_565 C8 C4 C9B 142.7(7) . 12_565 C8 C4 C9B 83.8(6) 12_565 12_565 C9A C4 C9B 23.3(7) . . C9A C4 C9B 52.0(10) 12_565 . C5 C4 C9B 103.3(7) . . C8 C4 C9B 83.8(6) . . C8 C4 C9B 142.7(7) 12_565 . C9B C4 C9B 73.5(12) 12_565 . C3 C5 C3 116.6(4) . 12_565 C3 C5 C4 121.68(19) . . C3 C5 C4 121.68(19) 12_565 . O3 C6 C7 180.000(6) . . O3 C6 O2 82(2) . 12_565 C7 C6 O2 98(2) . 12_565 O3 C6 O2 82(2) . 2 C7 C6 O2 98(2) . 2 O2 C6 O2 89.0(6) 12_565 2 O3 C6 O2 82(2) . . C7 C6 O2 98(2) . . O2 C6 O2 89.0(6) 12_565 . O2 C6 O2 165(4) 2 . O3 C6 O2 82(2) . 11_655 C7 C6 O2 98(2) . 11_655 O2 C6 O2 165(4) 12_565 11_655 O2 C6 O2 89.0(6) 2 11_655 O2 C6 O2 89.0(6) . 11_655 C4 C8 H2 109.5 . . C4 C8 H3 109.5 . . H2 C8 H3 109.5 . . C4 C8 H4 109.5 . . H2 C8 H4 109.5 . . H3 C8 H4 109.5 . . C9A C9A C4 75.3(6) 12_565 . loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 S1 C2 1.781(3) 14_665 S1 C2 1.782(3) . C1 O1 1.352(5) . C1 C2 1.403(3) 12_565 C1 C2 1.403(3) . O1 H5 0.73(6) . C2 C3 1.373(4) . C3 C5 1.389(4) . C3 H1 0.9300 . C4 C9A 1.402(17) . C4 C9A 1.402(17) 12_565 C4 C5 1.538(7) . C4 C8 1.569(10) . C4 C8 1.569(10) 12_565 C4 C9B 1.746(19) 12_565 C4 C9B 1.746(19) . C5 C3 1.389(4) 12_565 C6 O3 0.89(4) . C6 C7 1.396(13) . C6 O2 1.47(7) 12_565 C6 O2 1.47(7) 2 C6 O2 1.47(7) . C6 O2 1.47(7) 11_655 C8 H2 0.9600 . C8 H3 0.9600 . C8 H4 0.9600 . C9A C9A 0.71(3) 12_565 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_4 O1 C1 C2 C3 175.7(3) . . C2 C1 C2 C3 -2.5(5) 12_565 . O1 C1 C2 S1 -4.9(4) . . C2 C1 C2 S1 176.81(14) 12_565 . C2 S1 C2 C3 -86.8(3) 14_665 . C2 S1 C2 C1 93.8(2) 14_665 . C1 C2 C3 C5 -0.4(5) . . S1 C2 C3 C5 -179.8(3) . . C2 C3 C5 C3 3.3(6) . 12_565 C2 C3 C5 C4 -176.8(5) . . C9A C4 C5 C3 -73.8(9) . . C9A C4 C5 C3 -106.1(8) 12_565 . C8 C4 C5 C3 36.2(9) . . C8 C4 C5 C3 143.9(5) 12_565 . C9B C4 C5 C3 -127.9(6) 12_565 . C9B C4 C5 C3 -52.0(9) . . C9A C4 C5 C3 106.1(8) . 12_565 C9A C4 C5 C3 73.8(9) 12_565 12_565 C8 C4 C5 C3 -143.9(5) . 12_565 C8 C4 C5 C3 -36.2(9) 12_565 12_565 C9B C4 C5 C3 52.0(9) 12_565 12_565 C9B C4 C5 C3 127.9(6) . 12_565 C5 C4 C9A C9A -96.7(4) . 12_565 C8 C4 C9A C9A 146.0(5) . 12_565 C8 C4 C9A C9A 40.7(5) 12_565 12_565 C9B C4 C9A C9A -8.5(10) 12_565 12_565 C9B C4 C9A C9A -162.9(19) . 12_565