#------------------------------------------------------------------------------ #$Date: 2012-02-26 05:33:40 +0200 (Sun, 26 Feb 2012) $ #$Revision: 35646 $ #$URL: file:///home/coder/svn-repositories/cod/cif/1/1502346.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_1502346 loop_ _publ_author_name 'Giovanelli, Emerson' 'Leroux, S\'ebastien' 'Moisan, Lionel' 'Carreyre, H\'el\`ene' 'Thu\'ery, Pierre' 'Buisson, David-Alexandre' 'Meddour, Abdelkrim' 'Coustard, Jean-Marie' 'Thibaudeau, S\'ebastien' 'Rousseau, Bernard' 'Nicolas, Marc' 'Hellier, Paul' 'Doris, Eric' _publ_section_title ; On the elucidation of the mechanism of Vinca alkaloid fluorination in superacidic medium. ; _journal_issue 15 _journal_name_full 'Organic letters' _journal_page_first 4116 _journal_page_last 4119 _journal_volume 13 _journal_year 2011 _chemical_absolute_configuration syn _chemical_formula_sum 'C21 H24 N2 O2' _chemical_formula_weight 336.42 _space_group_IT_number 92 _symmetry_cell_setting tetragonal _symmetry_space_group_name_Hall 'P 4abw 2nw' _symmetry_space_group_name_H-M 'P 41 21 2' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 8 _cell_length_a 9.1072(3) _cell_length_b 9.1072(3) _cell_length_c 42.969(3) _cell_measurement_reflns_used 21434 _cell_measurement_temperature 100(2) _cell_measurement_theta_max 25.67 _cell_measurement_theta_min 2.93 _cell_volume 3563.9(3) _computing_cell_refinement 'DENZO-SMN (Otwinowski & Minor, 1997)' _computing_data_collection 'Kappa-CCD software (Nonius B.V., 1998)' _computing_data_reduction 'DENZO-SMN (Otwinowski & Minor, 1997)' _computing_molecular_graphics 'SHELXTL (Sheldrick, 2008)' _computing_publication_material 'SHELXTL (Sheldrick, 2008)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 2008)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 2008)' _diffrn_ambient_temperature 100(2) _diffrn_measured_fraction_theta_full 0.963 _diffrn_measured_fraction_theta_max 0.963 _diffrn_measurement_device_type 'Nonius Kappa-CCD' _diffrn_measurement_method '\f scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0389 _diffrn_reflns_av_sigmaI/netI 0.0574 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min -10 _diffrn_reflns_limit_k_max 7 _diffrn_reflns_limit_k_min -7 _diffrn_reflns_limit_l_max 51 _diffrn_reflns_limit_l_min -51 _diffrn_reflns_number 21434 _diffrn_reflns_theta_full 25.67 _diffrn_reflns_theta_max 25.67 _diffrn_reflns_theta_min 2.93 _diffrn_standards_decay_% none _diffrn_standards_interval_time 0 _exptl_absorpt_coefficient_mu 0.081 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.254 _exptl_crystal_description irregular _exptl_crystal_F_000 1440 _exptl_crystal_size_max 0.35 _exptl_crystal_size_mid 0.30 _exptl_crystal_size_min 0.25 _refine_diff_density_max 0.137 _refine_diff_density_min -0.175 _refine_diff_density_rms 0.039 _refine_ls_abs_structure_details 'Flack H D (1983), Acta Cryst. A39, 876-881' _refine_ls_abs_structure_Flack 0(2) _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.074 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 228 _refine_ls_number_reflns 2004 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.074 _refine_ls_R_factor_all 0.0605 _refine_ls_R_factor_gt 0.0442 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0488P)^2^+0.6721P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0980 _refine_ls_wR_factor_ref 0.1054 _reflns_number_gt 1640 _reflns_number_total 2004 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file ol201637m_si_002.cif _[local]_cod_data_source_block isocatharanthine_12 _cod_database_code 1502346 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, z+1/2' '-y+1/2, x+1/2, z+1/4' 'y+1/2, -x+1/2, z+3/4' '-x+1/2, y+1/2, -z+1/4' 'x+1/2, -y+1/2, -z+3/4' 'y, x, -z' '-y, -x, -z+1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags O1 O 0.1903(2) 0.3663(2) 0.94457(4) 0.0375(5) Uani 1 1 d . O2 O 0.2028(2) 0.4447(2) 0.99393(4) 0.0335(5) Uani 1 1 d . N6 N 0.3317(3) 0.7851(3) 0.91672(5) 0.0339(6) Uani 1 1 d . N16 N 0.5117(2) 0.3468(3) 0.94626(5) 0.0285(5) Uani 1 1 d . H16 H 0.4716 0.2917 0.9647 0.034 Uiso 1 1 d R C1 C 0.4065(3) 0.6747(3) 0.97842(6) 0.0308(7) Uani 1 1 d . H1A H 0.3765 0.6412 0.9989 0.037 Uiso 1 1 calc R H1B H 0.5130 0.6765 0.9778 0.037 Uiso 1 1 calc R C2 C 0.3462(4) 0.8301(3) 0.97261(6) 0.0375(7) Uani 1 1 d . H2 H 0.3826 0.8978 0.9886 0.045 Uiso 1 1 calc R C3 C 0.1790(4) 0.8257(4) 0.97311(7) 0.0469(8) Uani 1 1 d . H3A H 0.1451 0.7937 0.9934 0.056 Uiso 1 1 calc R H3B H 0.1401 0.9232 0.9692 0.056 Uiso 1 1 calc R C4 C 0.1254(3) 0.7215(4) 0.94855(6) 0.0395(8) Uani 1 1 d . C5 C 0.2524(3) 0.6614(3) 0.92984(6) 0.0324(7) Uani 1 1 d . H5 H 0.2153 0.5987 0.9131 0.039 Uiso 1 1 calc R C7 C 0.4232(3) 0.7531(4) 0.88946(6) 0.0381(7) Uani 1 1 d . H7A H 0.4461 0.8455 0.8793 0.046 Uiso 1 1 calc R H7B H 0.3648 0.6960 0.8750 0.046 Uiso 1 1 calc R C8 C 0.5665(3) 0.6717(3) 0.89491(7) 0.0383(7) Uani 1 1 d . H8A H 0.6123 0.6547 0.8749 0.046 Uiso 1 1 calc R H8B H 0.6312 0.7354 0.9067 0.046 Uiso 1 1 calc R C9 C 0.5566(3) 0.5269(3) 0.91165(6) 0.0292(6) Uani 1 1 d . C10 C 0.6544(3) 0.4060(3) 0.90570(6) 0.0303(6) Uani 1 1 d . C11 C 0.7603(3) 0.3780(4) 0.88249(7) 0.0384(7) Uani 1 1 d . H11 H 0.7823 0.4487 0.8676 0.046 Uiso 1 1 calc R C12 C 0.8306(4) 0.2437(4) 0.88233(7) 0.0437(8) Uani 1 1 d . H12 H 0.8998 0.2236 0.8670 0.052 Uiso 1 1 calc R C13 C 0.7994(3) 0.1376(4) 0.90477(7) 0.0445(8) Uani 1 1 d . H13 H 0.8485 0.0482 0.9041 0.053 Uiso 1 1 calc R C14 C 0.6970(3) 0.1621(3) 0.92803(7) 0.0370(7) Uani 1 1 d . H14 H 0.6780 0.0918 0.9432 0.044 Uiso 1 1 calc R C15 C 0.6239(3) 0.2963(3) 0.92776(6) 0.0299(6) Uani 1 1 d . C17 C 0.4695(3) 0.4862(3) 0.93630(5) 0.0274(6) Uani 1 1 d . C18 C 0.3476(3) 0.5668(3) 0.95314(6) 0.0269(6) Uani 1 1 d . C19 C 0.3986(4) 0.8791(3) 0.94040(7) 0.0412(8) Uani 1 1 d . H19A H 0.3709 0.9806 0.9368 0.049 Uiso 1 1 calc R H19B H 0.5047 0.8720 0.9392 0.049 Uiso 1 1 calc R C20 C -0.0139(4) 0.6753(4) 0.94394(7) 0.0538(10) Uani 1 1 d . H20 H -0.0310 0.6086 0.9280 0.065 Uiso 1 1 calc R C21 C -0.1420(4) 0.7246(6) 0.96295(9) 0.0782(15) Uani 1 1 d . H21A H -0.1161 0.7228 0.9846 0.117 Uiso 1 1 calc R H21B H -0.2236 0.6600 0.9594 0.117 Uiso 1 1 calc R H21C H -0.1686 0.8227 0.9571 0.117 Uiso 1 1 calc R C22 C 0.2412(3) 0.4543(3) 0.96686(6) 0.0289(6) Uani 1 1 d . C23 C 0.0823(4) 0.2572(4) 0.95346(8) 0.0497(9) Uani 1 1 d . H23A H 0.1158 0.2058 0.9716 0.075 Uiso 1 1 calc R H23B H 0.0690 0.1887 0.9367 0.075 Uiso 1 1 calc R H23C H -0.0094 0.3047 0.9579 0.075 Uiso 1 1 calc R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O1 0.0327(12) 0.0457(14) 0.0339(10) -0.0109(9) 0.0032(9) -0.0132(10) O2 0.0319(12) 0.0418(12) 0.0270(10) 0.0012(9) 0.0013(8) -0.0054(9) N6 0.0378(15) 0.0347(14) 0.0293(12) 0.0040(10) 0.0017(10) 0.0011(11) N16 0.0284(13) 0.0326(14) 0.0244(11) 0.0020(10) -0.0012(9) 0.0007(11) C1 0.0339(16) 0.0332(17) 0.0254(13) -0.0016(12) -0.0010(11) -0.0014(13) C2 0.051(2) 0.0301(17) 0.0316(15) -0.0017(12) -0.0011(14) 0.0038(15) C3 0.051(2) 0.049(2) 0.0406(17) -0.0022(15) 0.0043(15) 0.0173(17) C4 0.0333(18) 0.054(2) 0.0314(15) 0.0057(14) -0.0003(13) 0.0114(15) C5 0.0291(16) 0.0412(18) 0.0269(14) 0.0018(12) -0.0019(12) 0.0027(13) C7 0.0440(19) 0.0413(19) 0.0292(14) 0.0040(13) 0.0053(13) 0.0010(15) C8 0.0403(18) 0.0402(19) 0.0344(15) 0.0042(13) 0.0061(13) -0.0028(14) C9 0.0304(16) 0.0308(16) 0.0263(13) -0.0010(11) 0.0008(11) -0.0005(12) C10 0.0258(16) 0.0351(17) 0.0301(14) -0.0052(11) -0.0010(12) -0.0012(12) C11 0.0338(17) 0.0460(19) 0.0353(15) -0.0067(14) 0.0060(13) -0.0040(15) C12 0.0339(19) 0.050(2) 0.0476(18) -0.0127(16) 0.0055(14) 0.0031(16) C13 0.0351(19) 0.0416(19) 0.0567(19) -0.0154(16) -0.0022(15) 0.0061(15) C14 0.0312(17) 0.0359(18) 0.0441(16) -0.0037(14) -0.0063(13) -0.0007(14) C15 0.0258(15) 0.0323(16) 0.0317(14) -0.0046(12) -0.0026(11) -0.0029(13) C17 0.0289(16) 0.0291(16) 0.0241(12) -0.0025(11) -0.0025(11) -0.0020(12) C18 0.0250(15) 0.0309(16) 0.0248(13) -0.0010(11) -0.0007(11) -0.0012(12) C19 0.055(2) 0.0299(17) 0.0389(17) 0.0032(13) 0.0001(14) 0.0011(15) C20 0.038(2) 0.085(3) 0.0390(17) 0.0038(18) 0.0003(14) 0.0131(19) C21 0.040(2) 0.139(4) 0.056(2) 0.000(3) 0.0049(18) 0.025(3) C22 0.0211(15) 0.0342(17) 0.0314(15) -0.0036(12) -0.0013(12) 0.0013(12) C23 0.042(2) 0.053(2) 0.054(2) -0.0104(17) 0.0079(15) -0.0231(17) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C22 O1 C23 117.3(2) C5 N6 C19 113.0(2) C5 N6 C7 116.0(2) C19 N6 C7 115.8(2) C15 N16 C17 109.4(2) C15 N16 H16 124.0 C17 N16 H16 126.5 C2 C1 C18 110.1(2) C2 C1 H1A 109.6 C18 C1 H1A 109.6 C2 C1 H1B 109.6 C18 C1 H1B 109.6 H1A C1 H1B 108.2 C3 C2 C19 109.4(2) C3 C2 C1 109.3(3) C19 C2 C1 107.7(2) C3 C2 H2 110.1 C19 C2 H2 110.1 C1 C2 H2 110.1 C4 C3 C2 109.4(3) C4 C3 H3A 109.8 C2 C3 H3A 109.8 C4 C3 H3B 109.8 C2 C3 H3B 109.8 H3A C3 H3B 108.2 C20 C4 C3 127.3(3) C20 C4 C5 121.8(3) C3 C4 C5 110.7(3) N6 C5 C4 107.8(3) N6 C5 C18 113.4(2) C4 C5 C18 106.3(2) N6 C5 H5 109.8 C4 C5 H5 109.8 C18 C5 H5 109.8 N6 C7 C8 117.5(2) N6 C7 H7A 107.9 C8 C7 H7A 107.9 N6 C7 H7B 107.9 C8 C7 H7B 107.9 H7A C7 H7B 107.2 C9 C8 C7 116.8(3) C9 C8 H8A 108.1 C7 C8 H8A 108.1 C9 C8 H8B 108.1 C7 C8 H8B 108.1 H8A C8 H8B 107.3 C17 C9 C10 106.7(2) C17 C9 C8 129.7(3) C10 C9 C8 123.3(2) C15 C10 C11 118.9(3) C15 C10 C9 107.5(2) C11 C10 C9 133.4(3) C12 C11 C10 118.7(3) C12 C11 H11 120.6 C10 C11 H11 120.6 C11 C12 C13 121.1(3) C11 C12 H12 119.5 C13 C12 H12 119.5 C14 C13 C12 121.7(3) C14 C13 H13 119.2 C12 C13 H13 119.2 C13 C14 C15 117.2(3) C13 C14 H14 121.4 C15 C14 H14 121.4 N16 C15 C14 130.1(3) N16 C15 C10 107.4(2) C14 C15 C10 122.4(3) C9 C17 N16 108.8(2) C9 C17 C18 131.3(3) N16 C17 C18 119.8(2) C17 C18 C22 108.9(2) C17 C18 C1 112.7(2) C22 C18 C1 111.8(2) C17 C18 C5 111.3(2) C22 C18 C5 105.2(2) C1 C18 C5 106.7(2) N6 C19 C2 109.2(2) N6 C19 H19A 109.8 C2 C19 H19A 109.8 N6 C19 H19B 109.8 C2 C19 H19B 109.8 H19A C19 H19B 108.3 C4 C20 C21 124.0(3) C4 C20 H20 118.0 C21 C20 H20 118.0 C20 C21 H21A 109.5 C20 C21 H21B 109.5 H21A C21 H21B 109.5 C20 C21 H21C 109.5 H21A C21 H21C 109.5 H21B C21 H21C 109.5 O2 C22 O1 122.9(3) O2 C22 C18 126.8(2) O1 C22 C18 110.3(2) O1 C23 H23A 109.5 O1 C23 H23B 109.5 H23A C23 H23B 109.5 O1 C23 H23C 109.5 H23A C23 H23C 109.5 H23B C23 H23C 109.5 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance O1 C22 1.332(3) O1 C23 1.450(4) O2 C22 1.218(3) N6 C5 1.452(4) N6 C19 1.462(4) N6 C7 1.467(3) N16 C15 1.373(3) N16 C17 1.394(4) N16 H16 1.0079 C1 C2 1.538(4) C1 C18 1.560(4) C1 H1A 0.9700 C1 H1B 0.9700 C2 C3 1.524(5) C2 C19 1.530(4) C2 H2 0.9800 C3 C4 1.501(4) C3 H3A 0.9700 C3 H3B 0.9700 C4 C20 1.351(5) C4 C5 1.512(4) C5 C18 1.580(4) C5 H5 0.9800 C7 C8 1.519(4) C7 H7A 0.9700 C7 H7B 0.9700 C8 C9 1.505(4) C8 H8A 0.9700 C8 H8B 0.9700 C9 C17 1.375(4) C9 C10 1.439(4) C10 C15 1.405(4) C10 C11 1.410(4) C11 C12 1.381(5) C11 H11 0.9300 C12 C13 1.394(4) C12 H12 0.9300 C13 C14 1.385(4) C13 H13 0.9300 C14 C15 1.392(4) C14 H14 0.9300 C17 C18 1.515(4) C18 C22 1.528(4) C19 H19A 0.9700 C19 H19B 0.9700 C20 C21 1.493(4) C20 H20 0.9300 C21 H21A 0.9600 C21 H21B 0.9600 C21 H21C 0.9600 C23 H23A 0.9600 C23 H23B 0.9600 C23 H23C 0.9600 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A N16 H16 O2 1.01 1.97 2.949(3) 164.0 7_557