#------------------------------------------------------------------------------ #$Date: 2012-03-01 14:01:52 +0200 (Thu, 01 Mar 2012) $ #$Revision: 36612 $ #$URL: file:///home/coder/svn-repositories/cod/cif/1/50/26/1502659.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_1502659 loop_ _publ_author_name 'Ivachtchenko, Alexandre V.' 'Dmitriev, Dmitri E.' 'Golovina, Elena S.' 'Kadieva, Madina G.' 'Koryakova, Angela G.' 'Kysil, Volodymyr M.' 'Mitkin, Oleg D.' 'Okun, Ilya M.' 'Tkachenko, Sergey E.' 'Vorobiev, Anton A.' _publ_contact_author ; Ilya Okun ; _publ_section_title ; (3-Phenylsulfonylcycloalkano[e and d]pyrazolo[1,5-a]pyrimidin-2-yl)amines: potent and selective antagonists of the serotonin 5-HT6 receptor. ; _journal_issue 14 _journal_name_full 'Journal of medicinal chemistry' _journal_page_first 5186 _journal_page_last 5196 _journal_volume 53 _journal_year 2010 _chemical_formula_moiety 'C17 H18 N4 O2 S' _chemical_formula_sum 'C17 H18 N4 O2 S' _chemical_formula_weight 342.41 _chemical_name_systematic ; N,5-Dimethyl-3-(phenylsulfonyl)-7,8-dihydro-6H-cyclopenta[e]pyrazolo[1,5-a]pyrimidin-2-amine ; _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens difmap _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 116.031(11) _cell_angle_beta 92.445(10) _cell_angle_gamma 108.955(10) _cell_formula_units_Z 2 _cell_length_a 8.187(4) _cell_length_b 10.274(5) _cell_length_c 11.169(5) _cell_measurement_reflns_used 258 _cell_measurement_temperature 120(2) _cell_measurement_theta_max 27 _cell_measurement_theta_min 3 _cell_volume 779.2(7) _computing_cell_refinement 'SAINTPlus (Bruker, 1998a)' _computing_data_collection 'SMART (Bruker, 1998b)' _computing_data_reduction 'SAINTPlus (Bruker, 1998a)' _computing_molecular_graphics 'SHELXTL ver. 5.1 (Sheldrick, 1998b)' _computing_publication_material 'SHELXTL ver. 5.1 (Sheldrick, 1998b)' _computing_structure_refinement 'SHELXTL ver. 5.1 (Sheldrick, 1998b)' _computing_structure_solution 'SHELXTL ver. 5.1 (Sheldrick, 1998b)' _diffrn_ambient_temperature 120(2) _diffrn_measured_fraction_theta_full 0.995 _diffrn_measured_fraction_theta_max 0.995 _diffrn_measurement_device_type 'Bruker SMART 1000 CCD area detector' _diffrn_measurement_method 'phi and omega scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0492 _diffrn_reflns_av_sigmaI/netI 0.1368 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min -10 _diffrn_reflns_limit_k_max 13 _diffrn_reflns_limit_k_min -13 _diffrn_reflns_limit_l_max 14 _diffrn_reflns_limit_l_min -14 _diffrn_reflns_number 7889 _diffrn_reflns_theta_full 27.99 _diffrn_reflns_theta_max 27.99 _diffrn_reflns_theta_min 2.08 _exptl_absorpt_coefficient_mu 0.226 _exptl_absorpt_correction_T_max 0.957 _exptl_absorpt_correction_T_min 0.924 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details 'SADABS (Sheldrick, 1998a)' _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.460 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 360 _exptl_crystal_size_max 0.35 _exptl_crystal_size_mid 0.30 _exptl_crystal_size_min 0.20 _refine_diff_density_max 0.328 _refine_diff_density_min -0.320 _refine_diff_density_rms 0.064 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.000 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 223 _refine_ls_number_reflns 3744 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.000 _refine_ls_R_factor_all 0.1205 _refine_ls_R_factor_gt 0.0490 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0154P)^2^] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0821 _refine_ls_wR_factor_ref 0.0915 _reflns_number_gt 1779 _reflns_number_total 3744 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file jm100350r_si_002.cif _[local]_cod_data_source_block compound_9 _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Triclinic' changed to 'triclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_original_cell_volume 779.2(6) _cod_database_code 1502659 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags S1 S 0.02916(10) 0.16936(9) 0.27399(8) 0.0274(2) Uani 1 1 d . O1 O 0.1010(2) 0.1007(2) 0.15525(19) 0.0310(5) Uani 1 1 d . O2 O 0.1497(2) 0.2884(2) 0.40181(19) 0.0320(5) Uani 1 1 d . N1 N -0.2942(3) -0.2363(3) 0.2330(2) 0.0266(6) Uani 1 1 d . N2 N -0.2835(3) -0.1323(3) 0.3671(2) 0.0249(6) Uani 1 1 d . N3 N -0.1486(3) 0.1388(3) 0.5345(2) 0.0272(6) Uani 1 1 d . N4 N -0.1696(4) -0.2068(3) 0.0584(3) 0.0346(7) Uani 1 1 d . H4N H -0.095(3) -0.144(3) 0.039(3) 0.030(9) Uiso 1 1 d . C1 C -0.1883(4) -0.1434(3) 0.1887(3) 0.0251(7) Uani 1 1 d . C2 C -0.3726(4) -0.1701(3) 0.4537(3) 0.0270(7) Uani 1 1 d . C3 C -0.4950(4) -0.3273(3) 0.4253(3) 0.0317(8) Uani 1 1 d . H3A H -0.4345 -0.3990 0.4057 0.038 Uiso 1 1 calc R H3B H -0.5935 -0.3710 0.3496 0.038 Uiso 1 1 calc R C4 C -0.5576(5) -0.2916(4) 0.5617(3) 0.0539(10) Uani 1 1 d . H4A H -0.5316 -0.3537 0.5990 0.065 Uiso 1 1 calc R H4B H -0.6844 -0.3182 0.5458 0.065 Uiso 1 1 calc R C5 C -0.4588(4) -0.1132(3) 0.6645(3) 0.0323(8) Uani 1 1 d . H5A H -0.5420 -0.0628 0.6948 0.039 Uiso 1 1 calc R H5B H -0.3845 -0.0975 0.7435 0.039 Uiso 1 1 calc R C6 C -0.3498(4) -0.0510(3) 0.5833(3) 0.0271(7) Uani 1 1 d . C7 C -0.2370(4) 0.1007(3) 0.6204(3) 0.0285(7) Uani 1 1 d . C8 C -0.2087(4) 0.2308(3) 0.7642(3) 0.0388(8) Uani 1 1 d . H8A H -0.1315 0.3289 0.7727 0.058 Uiso 1 1 calc R H8B H -0.1563 0.2093 0.8284 0.058 Uiso 1 1 calc R H8C H -0.3204 0.2364 0.7824 0.058 Uiso 1 1 calc R C9 C -0.1731(4) 0.0220(3) 0.4076(3) 0.0242(7) Uani 1 1 d . C10 C -0.1103(3) 0.0163(3) 0.2914(3) 0.0246(7) Uani 1 1 d . C11 C -0.2346(4) -0.3746(3) -0.0317(3) 0.0360(8) Uani 1 1 d . H11A H -0.2294 -0.3946 -0.1236 0.054 Uiso 1 1 calc R H11B H -0.3549 -0.4223 -0.0276 0.054 Uiso 1 1 calc R H11C H -0.1626 -0.4179 -0.0036 0.054 Uiso 1 1 calc R C12 C -0.1050(3) 0.2535(3) 0.2282(3) 0.0216(7) Uani 1 1 d . C13 C -0.2375(4) 0.1615(3) 0.1126(3) 0.0314(8) Uani 1 1 d . H13A H -0.2588 0.0557 0.0594 0.038 Uiso 1 1 calc R C14 C -0.3394(4) 0.2289(4) 0.0763(3) 0.0405(9) Uani 1 1 d . H14A H -0.4317 0.1677 -0.0005 0.049 Uiso 1 1 calc R C15 C -0.3030(4) 0.3880(4) 0.1551(3) 0.0361(8) Uani 1 1 d . H15A H -0.3712 0.4330 0.1307 0.043 Uiso 1 1 calc R C16 C -0.1673(4) 0.4789(3) 0.2684(3) 0.0336(8) Uani 1 1 d . H16A H -0.1433 0.5854 0.3200 0.040 Uiso 1 1 calc R C17 C -0.0641(4) 0.4122(3) 0.3073(3) 0.0270(7) Uani 1 1 d . H17A H 0.0288 0.4731 0.3838 0.032 Uiso 1 1 calc R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 S1 0.0292(5) 0.0284(5) 0.0300(5) 0.0157(4) 0.0092(4) 0.0145(4) O1 0.0331(13) 0.0374(12) 0.0361(13) 0.0214(10) 0.0206(10) 0.0227(10) O2 0.0306(12) 0.0315(12) 0.0303(13) 0.0142(11) 0.0021(10) 0.0091(10) N1 0.0348(16) 0.0251(14) 0.0248(15) 0.0125(12) 0.0124(12) 0.0156(12) N2 0.0273(15) 0.0264(14) 0.0270(15) 0.0151(12) 0.0087(12) 0.0138(12) N3 0.0310(15) 0.0258(14) 0.0306(16) 0.0151(13) 0.0092(13) 0.0153(12) N4 0.0488(19) 0.0257(16) 0.0320(17) 0.0154(14) 0.0173(14) 0.0142(14) C1 0.0302(18) 0.0285(17) 0.0264(18) 0.0161(15) 0.0090(15) 0.0181(15) C2 0.0250(18) 0.0318(18) 0.034(2) 0.0197(16) 0.0084(15) 0.0166(15) C3 0.0313(19) 0.0372(19) 0.038(2) 0.0237(17) 0.0098(16) 0.0175(16) C4 0.060(3) 0.046(2) 0.066(3) 0.033(2) 0.032(2) 0.022(2) C5 0.0310(19) 0.044(2) 0.0352(19) 0.0240(17) 0.0141(16) 0.0219(16) C6 0.0257(18) 0.0350(19) 0.0376(19) 0.0252(17) 0.0106(15) 0.0200(15) C7 0.0279(18) 0.041(2) 0.0277(19) 0.0191(16) 0.0079(15) 0.0222(16) C8 0.047(2) 0.046(2) 0.0310(19) 0.0190(17) 0.0171(17) 0.0260(18) C9 0.0237(17) 0.0203(17) 0.0306(18) 0.0128(15) 0.0039(15) 0.0103(14) C10 0.0260(18) 0.0231(16) 0.0296(18) 0.0136(14) 0.0076(14) 0.0138(14) C11 0.047(2) 0.0293(18) 0.0299(19) 0.0128(16) 0.0137(16) 0.0145(16) C12 0.0231(17) 0.0238(16) 0.0244(17) 0.0153(14) 0.0132(14) 0.0103(13) C13 0.0337(19) 0.0236(17) 0.036(2) 0.0133(15) 0.0061(16) 0.0114(15) C14 0.037(2) 0.041(2) 0.045(2) 0.0245(18) 0.0022(17) 0.0128(17) C15 0.033(2) 0.043(2) 0.049(2) 0.0292(18) 0.0135(18) 0.0223(17) C16 0.040(2) 0.0341(19) 0.038(2) 0.0207(17) 0.0217(17) 0.0204(17) C17 0.0254(18) 0.0299(18) 0.0265(18) 0.0142(15) 0.0091(14) 0.0102(15) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle O2 S1 O1 118.81(12) O2 S1 C10 110.71(13) O1 S1 C10 106.47(13) O2 S1 C12 107.66(13) O1 S1 C12 105.64(12) C10 S1 C12 106.89(13) C1 N1 N2 103.1(2) C2 N2 N1 125.3(2) C2 N2 C9 120.9(2) N1 N2 C9 113.8(2) C7 N3 C9 117.1(2) C1 N4 C11 123.0(2) C1 N4 H4N 114.6(19) C11 N4 H4N 120.6(19) N4 C1 N1 119.4(3) N4 C1 C10 128.0(3) N1 C1 C10 112.6(2) N2 C2 C6 117.7(3) N2 C2 C3 127.1(3) C6 C2 C3 115.1(3) C2 C3 C4 102.0(2) C2 C3 H3A 111.4 C4 C3 H3A 111.4 C2 C3 H3B 111.4 C4 C3 H3B 111.4 H3A C3 H3B 109.2 C3 C4 C5 108.7(2) C3 C4 H4A 110.0 C5 C4 H4A 110.0 C3 C4 H4B 110.0 C5 C4 H4B 110.0 H4A C4 H4B 108.3 C6 C5 C4 103.5(2) C6 C5 H5A 111.1 C4 C5 H5A 111.1 C6 C5 H5B 111.1 C4 C5 H5B 111.1 H5A C5 H5B 109.0 C2 C6 C7 119.7(3) C2 C6 C5 110.6(3) C7 C6 C5 129.7(3) N3 C7 C6 122.8(3) N3 C7 C8 117.7(3) C6 C7 C8 119.6(3) C7 C8 H8A 109.5 C7 C8 H8B 109.5 H8A C8 H8B 109.5 C7 C8 H8C 109.5 H8A C8 H8C 109.5 H8B C8 H8C 109.5 N3 C9 N2 121.7(3) N3 C9 C10 133.6(3) N2 C9 C10 104.6(2) C9 C10 C1 105.9(2) C9 C10 S1 127.6(2) C1 C10 S1 126.5(2) N4 C11 H11A 109.5 N4 C11 H11B 109.5 H11A C11 H11B 109.5 N4 C11 H11C 109.5 H11A C11 H11C 109.5 H11B C11 H11C 109.5 C13 C12 C17 122.6(3) C13 C12 S1 119.3(2) C17 C12 S1 118.0(2) C12 C13 C14 118.9(3) C12 C13 H13A 120.6 C14 C13 H13A 120.6 C15 C14 C13 119.9(3) C15 C14 H14A 120.1 C13 C14 H14A 120.1 C16 C15 C14 120.4(3) C16 C15 H15A 119.8 C14 C15 H15A 119.8 C15 C16 C17 120.5(3) C15 C16 H16A 119.8 C17 C16 H16A 119.8 C12 C17 C16 117.8(3) C12 C17 H17A 121.1 C16 C17 H17A 121.1 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance S1 O2 1.439(2) S1 O1 1.4550(19) S1 C10 1.713(3) S1 C12 1.781(3) N1 C1 1.349(3) N1 N2 1.385(3) N2 C2 1.350(3) N2 C9 1.393(3) N3 C7 1.343(3) N3 C9 1.348(3) N4 C1 1.347(3) N4 C11 1.450(3) N4 H4N 0.84(2) C1 C10 1.422(4) C2 C6 1.378(4) C2 C3 1.478(4) C3 C4 1.554(4) C3 H3A 0.9700 C3 H3B 0.9700 C4 C5 1.563(4) C4 H4A 0.9700 C4 H4B 0.9700 C5 C6 1.495(4) C5 H5A 0.9700 C5 H5B 0.9700 C6 C7 1.385(4) C7 C8 1.517(4) C8 H8A 0.9600 C8 H8B 0.9600 C8 H8C 0.9600 C9 C10 1.401(4) C11 H11A 0.9600 C11 H11B 0.9600 C11 H11C 0.9600 C12 C13 1.371(4) C12 C17 1.381(3) C13 C14 1.391(4) C13 H13A 0.9300 C14 C15 1.391(4) C14 H14A 0.9300 C15 C16 1.370(4) C15 H15A 0.9300 C16 C17 1.406(4) C16 H16A 0.9300 C17 H17A 0.9300 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA N4 H4N O1 2_555 0.84(2) 2.40(3) 3.033(4) 132(2) loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C1 N1 N2 C2 177.8(2) C1 N1 N2 C9 -0.4(3) C11 N4 C1 N1 -10.4(4) C11 N4 C1 C10 170.7(3) N2 N1 C1 N4 -178.8(2) N2 N1 C1 C10 0.2(3) N1 N2 C2 C6 -178.4(2) C9 N2 C2 C6 -0.3(4) N1 N2 C2 C3 1.3(4) C9 N2 C2 C3 179.4(3) N2 C2 C3 C4 -178.0(3) C6 C2 C3 C4 1.7(3) C2 C3 C4 C5 -2.5(3) C3 C4 C5 C6 2.4(3) N2 C2 C6 C7 -0.6(4) C3 C2 C6 C7 179.6(2) N2 C2 C6 C5 179.5(2) C3 C2 C6 C5 -0.2(3) C4 C5 C6 C2 -1.4(3) C4 C5 C6 C7 178.8(3) C9 N3 C7 C6 -0.1(4) C9 N3 C7 C8 179.2(2) C2 C6 C7 N3 0.8(4) C5 C6 C7 N3 -179.3(3) C2 C6 C7 C8 -178.5(2) C5 C6 C7 C8 1.4(4) C7 N3 C9 N2 -0.8(4) C7 N3 C9 C10 177.8(3) C2 N2 C9 N3 1.1(4) N1 N2 C9 N3 179.4(2) C2 N2 C9 C10 -177.9(2) N1 N2 C9 C10 0.4(3) N3 C9 C10 C1 -179.0(3) N2 C9 C10 C1 -0.3(3) N3 C9 C10 S1 0.2(5) N2 C9 C10 S1 178.9(2) N4 C1 C10 C9 179.0(3) N1 C1 C10 C9 0.0(3) N4 C1 C10 S1 -0.2(4) N1 C1 C10 S1 -179.2(2) O2 S1 C10 C9 30.9(3) O1 S1 C10 C9 161.4(2) C12 S1 C10 C9 -86.1(3) O2 S1 C10 C1 -150.1(2) O1 S1 C10 C1 -19.6(3) C12 S1 C10 C1 93.0(3) O2 S1 C12 C13 -177.0(2) O1 S1 C12 C13 55.1(2) C10 S1 C12 C13 -58.0(2) O2 S1 C12 C17 6.7(2) O1 S1 C12 C17 -121.2(2) C10 S1 C12 C17 125.7(2) C17 C12 C13 C14 -2.6(4) S1 C12 C13 C14 -178.8(2) C12 C13 C14 C15 1.6(4) C13 C14 C15 C16 0.0(5) C14 C15 C16 C17 -0.6(4) C13 C12 C17 C16 2.0(4) S1 C12 C17 C16 178.2(2) C15 C16 C17 C12 -0.4(4)