#------------------------------------------------------------------------------ #$Date: 2013-12-28 09:07:06 +0200 (Sat, 28 Dec 2013) $ #$Revision: 91932 $ #$URL: file:///home/coder/svn-repositories/cod/cif/1/50/41/1504183.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_1504183 loop_ _publ_author_name 'Feng, Tao' 'Cai, Xiang-Hai' 'Li, Yan' 'Wang, Yuan-Yuan' 'Liu, Ya-Ping' 'Xie, Ming-Jin' 'Luo, Xiao-Dong' _publ_section_title ; Melohenines A and B, two unprecedented alkaloids from Melodinus henryi. ; _journal_issue 21 _journal_name_full 'Organic letters' _journal_page_first 4834 _journal_page_last 4837 _journal_volume 11 _journal_year 2009 _chemical_absolute_configuration rm _chemical_formula_sum 'C19 H24 N2 O3' _chemical_formula_weight 328.40 _chemical_name_systematic ; ? ; _space_group_IT_number 19 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'P 2ac 2ab' _symmetry_space_group_name_H-M 'P 21 21 21' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 7.9717(12) _cell_length_b 12.2181(18) _cell_length_c 17.265(3) _cell_measurement_reflns_used 1735 _cell_measurement_temperature 298(2) _cell_measurement_theta_max 20.91 _cell_measurement_theta_min 2.36 _cell_volume 1681.6(5) _computing_cell_refinement 'Bruker apex II' _computing_data_collection 'Bruker apex II' _computing_data_reduction 'Bruker SAINT' _computing_molecular_graphics 'Bruker SHELXTL' _computing_publication_material 'Bruker SHELXTL' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 298(2) _diffrn_measured_fraction_theta_full 0.987 _diffrn_measured_fraction_theta_max 0.957 _diffrn_measurement_device_type 'CCD area detector' _diffrn_measurement_method 'phi and omega scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0449 _diffrn_reflns_av_sigmaI/netI 0.0636 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min -9 _diffrn_reflns_limit_k_max 15 _diffrn_reflns_limit_k_min -16 _diffrn_reflns_limit_l_max 23 _diffrn_reflns_limit_l_min -19 _diffrn_reflns_number 11041 _diffrn_reflns_theta_full 28.65 _diffrn_reflns_theta_max 28.65 _diffrn_reflns_theta_min 2.04 _exptl_absorpt_coefficient_mu 0.088 _exptl_absorpt_correction_T_max 0.9930 _exptl_absorpt_correction_T_min 0.9792 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details sadabs _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.297 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 704 _exptl_crystal_size_max 0.24 _exptl_crystal_size_mid 0.16 _exptl_crystal_size_min 0.08 _refine_diff_density_max 0.179 _refine_diff_density_min -0.149 _refine_diff_density_rms 0.035 _refine_ls_abs_structure_details 'None, Friedel Pairs merged' _refine_ls_abs_structure_Flack -0.3(19) _refine_ls_extinction_coef 0.015(3) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXL _refine_ls_goodness_of_fit_ref 0.750 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 220 _refine_ls_number_reflns 4041 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 0.750 _refine_ls_R_factor_all 0.0900 _refine_ls_R_factor_gt 0.0489 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.1000P)^2^+0.7566P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1207 _refine_ls_wR_factor_ref 0.1529 _reflns_number_gt 2595 _reflns_number_total 4041 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file ol9018826_si_003.cif _[local]_cod_data_source_block 090303a _[local]_cod_cif_authors_sg_H-M P2(1)2(1)2(1) _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_original_cell_volume 1681.6(4) _cod_database_code 1504183 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' '-x, y+1/2, -z+1/2' 'x+1/2, -y+1/2, -z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags N1 N 0.8864(3) 0.89600(15) 0.22995(12) 0.0330(5) Uani 1 1 d . N2 N 0.5378(3) 0.80901(18) 0.19856(13) 0.0382(5) Uani 1 1 d . O1 O 0.8045(3) 1.07611(16) 0.26257(13) 0.0519(6) Uani 1 1 d . H1 H 0.8873 1.1127 0.2738 0.078 Uiso 1 1 calc R O2 O 0.9155(2) 0.71480(14) 0.20430(12) 0.0447(5) Uani 1 1 d . O3 O 0.8231(3) 0.65189(17) 0.38059(14) 0.0648(7) Uani 1 1 d . C2 C 0.8407(3) 0.80143(19) 0.19413(15) 0.0315(5) Uani 1 1 d . C3 C 0.3841(3) 0.7938(2) 0.15297(18) 0.0482(7) Uani 1 1 d . H3A H 0.2879 0.7906 0.1873 0.058 Uiso 1 1 calc R H3B H 0.3902 0.7252 0.1247 0.058 Uiso 1 1 calc R C5 C 0.5469(4) 0.7371(2) 0.26623(17) 0.0453(7) Uani 1 1 d . H5A H 0.6049 0.6703 0.2520 0.054 Uiso 1 1 calc R H5B H 0.4340 0.7175 0.2820 0.054 Uiso 1 1 calc R C6 C 0.6391(3) 0.7910(2) 0.33581(17) 0.0447(7) Uani 1 1 d . H6A H 0.6516 0.8685 0.3248 0.054 Uiso 1 1 calc R H6B H 0.5677 0.7846 0.3811 0.054 Uiso 1 1 calc R C7 C 0.8108(4) 0.7455(2) 0.35635(16) 0.0448(7) Uani 1 1 d . C8 C 0.9636(3) 0.8170(2) 0.35461(17) 0.0411(6) Uani 1 1 d . C9 C 1.0762(4) 0.8104(3) 0.41608(19) 0.0536(8) Uani 1 1 d . H9 H 1.0567 0.7604 0.4557 0.064 Uiso 1 1 calc R C10 C 1.2163(4) 0.8768(3) 0.4193(2) 0.0624(9) Uani 1 1 d . H10 H 1.2880 0.8737 0.4617 0.075 Uiso 1 1 calc R C11 C 1.2490(4) 0.9477(3) 0.3590(2) 0.0586(9) Uani 1 1 d . H11 H 1.3440 0.9918 0.3609 0.070 Uiso 1 1 calc R C12 C 1.1432(4) 0.9542(2) 0.29622(19) 0.0460(7) Uani 1 1 d . H12 H 1.1673 1.0016 0.2556 0.055 Uiso 1 1 calc R C13 C 1.0000(3) 0.88929(19) 0.29403(16) 0.0348(6) Uani 1 1 d . C14 C 0.3634(4) 0.8881(3) 0.09638(19) 0.0522(8) Uani 1 1 d . H14A H 0.3419 0.9549 0.1251 0.063 Uiso 1 1 calc R H14B H 0.2669 0.8742 0.0636 0.063 Uiso 1 1 calc R C15 C 0.5179(4) 0.9042(2) 0.04565(18) 0.0466(7) Uani 1 1 d . H15A H 0.5071 0.9728 0.0178 0.056 Uiso 1 1 calc R H15B H 0.5228 0.8457 0.0078 0.056 Uiso 1 1 calc R C16 C 0.8428(3) 1.00734(18) 0.19982(17) 0.0371(6) Uani 1 1 d . H16 H 0.9400 1.0372 0.1722 0.045 Uiso 1 1 calc R C17 C 0.6941(3) 1.00576(19) 0.14551(17) 0.0371(6) Uani 1 1 d . H17A H 0.6981 1.0710 0.1136 0.045 Uiso 1 1 calc R H17B H 0.5923 1.0095 0.1762 0.045 Uiso 1 1 calc R C18 C 0.8473(6) 0.9889(3) -0.0222(2) 0.0753(11) Uani 1 1 d . H18A H 0.7449 0.9940 -0.0512 0.113 Uiso 1 1 calc R H18B H 0.9387 0.9736 -0.0567 0.113 Uiso 1 1 calc R H18C H 0.8677 1.0570 0.0040 0.113 Uiso 1 1 calc R C19 C 0.8325(4) 0.8972(3) 0.03719(17) 0.0481(7) Uani 1 1 d . H19A H 0.9344 0.8958 0.0679 0.058 Uiso 1 1 calc R H19B H 0.8254 0.8281 0.0097 0.058 Uiso 1 1 calc R C20 C 0.6827(3) 0.9056(2) 0.09214(15) 0.0363(6) Uani 1 1 d . C21 C 0.6836(3) 0.8052(2) 0.14588(15) 0.0340(5) Uani 1 1 d . H21 H 0.6770 0.7386 0.1144 0.041 Uiso 1 1 calc R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 N1 0.0337(10) 0.0274(10) 0.0378(11) 0.0016(9) -0.0018(9) 0.0028(9) N2 0.0369(11) 0.0398(11) 0.0379(12) 0.0006(10) 0.0030(9) -0.0081(9) O1 0.0480(11) 0.0398(10) 0.0679(14) -0.0205(10) -0.0107(11) 0.0072(9) O2 0.0508(11) 0.0312(9) 0.0523(12) -0.0021(9) -0.0017(9) 0.0107(8) O3 0.0767(16) 0.0515(13) 0.0662(15) 0.0233(12) -0.0005(13) -0.0035(12) C2 0.0330(12) 0.0273(11) 0.0343(13) -0.0002(10) 0.0074(10) 0.0007(10) C3 0.0374(14) 0.0540(17) 0.0532(18) -0.0055(15) -0.0012(13) -0.0072(13) C5 0.0491(16) 0.0423(14) 0.0446(16) 0.0057(13) 0.0058(12) -0.0150(13) C6 0.0434(14) 0.0510(16) 0.0396(15) 0.0013(13) 0.0082(12) -0.0048(13) C7 0.0548(16) 0.0453(15) 0.0342(14) 0.0026(13) 0.0023(13) -0.0022(13) C8 0.0442(14) 0.0385(14) 0.0407(16) -0.0008(13) -0.0031(12) 0.0048(12) C9 0.0582(18) 0.0583(18) 0.0444(18) 0.0062(15) -0.0087(15) 0.0099(16) C10 0.0562(19) 0.073(2) 0.058(2) -0.0039(19) -0.0220(16) 0.0078(17) C11 0.0467(16) 0.0588(19) 0.070(2) -0.0063(19) -0.0165(16) -0.0031(15) C12 0.0413(15) 0.0411(14) 0.0556(18) -0.0001(14) -0.0059(14) -0.0022(12) C13 0.0353(13) 0.0305(12) 0.0386(14) -0.0038(11) -0.0042(11) 0.0052(10) C14 0.0394(14) 0.0588(19) 0.0584(19) -0.0034(16) -0.0119(14) 0.0019(14) C15 0.0510(16) 0.0454(16) 0.0434(16) 0.0000(13) -0.0101(13) -0.0024(14) C16 0.0396(14) 0.0248(11) 0.0470(16) 0.0012(11) -0.0022(12) 0.0002(10) C17 0.0393(14) 0.0274(12) 0.0447(16) 0.0028(11) -0.0021(12) 0.0008(11) C18 0.088(3) 0.079(2) 0.059(2) 0.017(2) 0.021(2) -0.013(2) C19 0.0521(16) 0.0525(17) 0.0397(15) 0.0041(13) 0.0101(13) -0.0006(15) C20 0.0388(13) 0.0337(13) 0.0365(14) 0.0011(11) 0.0005(11) -0.0012(12) C21 0.0379(12) 0.0288(11) 0.0353(14) -0.0058(11) 0.0017(11) -0.0008(11) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C2 N1 C13 118.17(19) C2 N1 C16 123.5(2) C13 N1 C16 117.85(19) C5 N2 C3 113.1(2) C5 N2 C21 115.7(2) C3 N2 C21 108.8(2) C16 O1 H1 109.5 O2 C2 N1 122.5(2) O2 C2 C21 120.6(2) N1 C2 C21 116.7(2) N2 C3 C14 109.8(2) N2 C3 H3A 109.7 C14 C3 H3A 109.7 N2 C3 H3B 109.7 C14 C3 H3B 109.7 H3A C3 H3B 108.2 N2 C5 C6 112.7(2) N2 C5 H5A 109.1 C6 C5 H5A 109.1 N2 C5 H5B 109.1 C6 C5 H5B 109.1 H5A C5 H5B 107.8 C7 C6 C5 116.8(2) C7 C6 H6A 108.1 C5 C6 H6A 108.1 C7 C6 H6B 108.1 C5 C6 H6B 108.1 H6A C6 H6B 107.3 O3 C7 C8 119.1(3) O3 C7 C6 119.7(3) C8 C7 C6 120.9(2) C9 C8 C13 118.2(3) C9 C8 C7 118.4(3) C13 C8 C7 123.5(2) C10 C9 C8 121.2(3) C10 C9 H9 119.4 C8 C9 H9 119.4 C11 C10 C9 119.4(3) C11 C10 H10 120.3 C9 C10 H10 120.3 C12 C11 C10 121.0(3) C12 C11 H11 119.5 C10 C11 H11 119.5 C11 C12 C13 119.5(3) C11 C12 H12 120.3 C13 C12 H12 120.3 C12 C13 C8 120.7(2) C12 C13 N1 120.5(2) C8 C13 N1 118.8(2) C3 C14 C15 112.3(2) C3 C14 H14A 109.1 C15 C14 H14A 109.1 C3 C14 H14B 109.1 C15 C14 H14B 109.1 H14A C14 H14B 107.9 C14 C15 C20 113.0(2) C14 C15 H15A 109.0 C20 C15 H15A 109.0 C14 C15 H15B 109.0 C20 C15 H15B 109.0 H15A C15 H15B 107.8 O1 C16 N1 109.0(2) O1 C16 C17 108.4(2) N1 C16 C17 112.7(2) O1 C16 H16 108.9 N1 C16 H16 108.9 C17 C16 H16 108.9 C16 C17 C20 115.4(2) C16 C17 H17A 108.4 C20 C17 H17A 108.4 C16 C17 H17B 108.4 C20 C17 H17B 108.4 H17A C17 H17B 107.5 C19 C18 H18A 109.5 C19 C18 H18B 109.5 H18A C18 H18B 109.5 C19 C18 H18C 109.5 H18A C18 H18C 109.5 H18B C18 H18C 109.5 C18 C19 C20 115.4(3) C18 C19 H19A 108.4 C20 C19 H19A 108.4 C18 C19 H19B 108.4 C20 C19 H19B 108.4 H19A C19 H19B 107.5 C19 C20 C17 112.3(2) C19 C20 C21 108.5(2) C17 C20 C21 105.9(2) C19 C20 C15 110.0(2) C17 C20 C15 111.8(2) C21 C20 C15 108.1(2) N2 C21 C2 108.4(2) N2 C21 C20 110.0(2) C2 C21 C20 111.2(2) N2 C21 H21 109.1 C2 C21 H21 109.1 C20 C21 H21 109.1 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance N1 C2 1.360(3) N1 C13 1.432(3) N1 C16 1.497(3) N2 C5 1.463(4) N2 C3 1.468(3) N2 C21 1.476(3) O1 C16 1.405(3) O1 H1 0.8200 O2 C2 1.227(3) O3 C7 1.222(3) C2 C21 1.505(4) C3 C14 1.520(4) C3 H3A 0.9700 C3 H3B 0.9700 C5 C6 1.555(4) C5 H5A 0.9700 C5 H5B 0.9700 C6 C7 1.520(4) C6 H6A 0.9700 C6 H6B 0.9700 C7 C8 1.499(4) C8 C9 1.392(4) C8 C13 1.400(4) C9 C10 1.382(5) C9 H9 0.9300 C10 C11 1.378(5) C10 H10 0.9300 C11 C12 1.377(4) C11 H11 0.9300 C12 C13 1.390(4) C12 H12 0.9300 C14 C15 1.524(4) C14 H14A 0.9700 C14 H14B 0.9700 C15 C20 1.540(4) C15 H15A 0.9700 C15 H15B 0.9700 C16 C17 1.512(4) C16 H16 0.9800 C17 C20 1.535(4) C17 H17A 0.9700 C17 H17B 0.9700 C18 C19 1.524(4) C18 H18A 0.9600 C18 H18B 0.9600 C18 H18C 0.9600 C19 C20 1.529(4) C19 H19A 0.9700 C19 H19B 0.9700 C20 C21 1.538(3) C21 H21 0.9800 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A O1 H1 O2 0.82 2.04 2.860(3) 174.8 3_755 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C13 N1 C2 O2 -14.3(4) C16 N1 C2 O2 157.4(2) C13 N1 C2 C21 160.7(2) C16 N1 C2 C21 -27.6(3) C5 N2 C3 C14 166.3(2) C21 N2 C3 C14 -63.6(3) C3 N2 C5 C6 -146.9(2) C21 N2 C5 C6 86.5(3) N2 C5 C6 C7 -109.6(3) C5 C6 C7 O3 -65.8(4) C5 C6 C7 C8 120.1(3) O3 C7 C8 C9 -38.9(4) C6 C7 C8 C9 135.2(3) O3 C7 C8 C13 140.4(3) C6 C7 C8 C13 -45.4(4) C13 C8 C9 C10 2.9(4) C7 C8 C9 C10 -177.7(3) C8 C9 C10 C11 -2.7(5) C9 C10 C11 C12 0.8(5) C10 C11 C12 C13 0.9(5) C11 C12 C13 C8 -0.6(4) C11 C12 C13 N1 178.9(3) C9 C8 C13 C12 -1.2(4) C7 C8 C13 C12 179.4(3) C9 C8 C13 N1 179.2(2) C7 C8 C13 N1 -0.1(4) C2 N1 C13 C12 128.9(2) C16 N1 C13 C12 -43.2(3) C2 N1 C13 C8 -51.6(3) C16 N1 C13 C8 136.3(2) N2 C3 C14 C15 54.0(3) C3 C14 C15 C20 -48.1(3) C2 N1 C16 O1 141.9(2) C13 N1 C16 O1 -46.4(3) C2 N1 C16 C17 21.5(3) C13 N1 C16 C17 -166.8(2) O1 C16 C17 C20 -157.5(2) N1 C16 C17 C20 -36.7(3) C18 C19 C20 C17 -65.2(3) C18 C19 C20 C21 178.1(3) C18 C19 C20 C15 60.1(3) C16 C17 C20 C19 -62.2(3) C16 C17 C20 C21 56.1(3) C16 C17 C20 C15 173.5(2) C14 C15 C20 C19 167.9(2) C14 C15 C20 C17 -66.6(3) C14 C15 C20 C21 49.6(3) C5 N2 C21 C2 -41.8(3) C3 N2 C21 C2 -170.4(2) C5 N2 C21 C20 -163.6(2) C3 N2 C21 C20 67.8(2) O2 C2 C21 N2 101.4(3) N1 C2 C21 N2 -73.7(3) O2 C2 C21 C20 -137.6(2) N1 C2 C21 C20 47.3(3) C19 C20 C21 N2 -178.5(2) C17 C20 C21 N2 60.7(2) C15 C20 C21 N2 -59.3(3) C19 C20 C21 C2 61.4(3) C17 C20 C21 C2 -59.4(2) C15 C20 C21 C2 -179.4(2) _journal_paper_doi 10.1021/ol9018826