#------------------------------------------------------------------------------ #$Date: 2016-02-14 16:26:36 +0200 (Sun, 14 Feb 2016) $ #$Revision: 176435 $ #$URL: file:///home/coder/svn-repositories/cod/cif/1/50/46/1504694.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_1504694 loop_ _publ_author_name 'Minami, Yasunori' 'Kuniyasu, Hitoshi' 'Kambe, Nobuaki' _publ_section_title ; One-pot syntheses of 2,3-dihydrothiopyran-4-one derivatives by Pd/Cu-catalyzed reactions of alpha,beta-unsaturated thioesters with propargyl alcohols. ; _journal_issue 12 _journal_name_full 'Organic letters' _journal_page_first 2469 _journal_page_last 2472 _journal_paper_doi 10.1021/ol800754w _journal_volume 10 _journal_year 2008 _chemical_formula_moiety 'C15 H17 N O4 S ' _chemical_formula_sum 'C15 H17 N O4 S' _chemical_formula_weight 307.36 _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_Int_Tables_number 14 _symmetry_space_group_name_Hall '-P 2yab' _symmetry_space_group_name_H-M 'P 1 21/a 1' _cell_angle_alpha 90 _cell_angle_beta 122.578(1) _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 11.1771(4) _cell_length_b 14.9463(5) _cell_length_c 11.0961(6) _cell_measurement_reflns_used 13422 _cell_measurement_temperature 274.2 _cell_measurement_theta_max 27.5 _cell_measurement_theta_min 2.2 _cell_volume 1562.01(12) _computing_cell_refinement PROCESS-AUTO _computing_data_collection PROCESS-AUTO _computing_data_reduction 'teXsan Ver. 1.11' _computing_publication_material 'teXsan Ver. 1.11' _computing_structure_refinement 'teXsan Ver. 1.10' _computing_structure_solution SIR92 _diffrn_detector_area_resol_mean 10.00 _diffrn_measured_fraction_theta_full 0.9994 _diffrn_measured_fraction_theta_max 0.9994 _diffrn_measurement_device_type 'Rigaku RAXIS-RAPID Imaging Plate' _diffrn_measurement_method \w _diffrn_radiation_type 'Mo K\a' _diffrn_radiation_wavelength 0.7107 _diffrn_reflns_av_R_equivalents 0.035 _diffrn_reflns_limit_h_max 14 _diffrn_reflns_limit_h_min -12 _diffrn_reflns_limit_k_max 19 _diffrn_reflns_limit_k_min -19 _diffrn_reflns_limit_l_max 14 _diffrn_reflns_limit_l_min -14 _diffrn_reflns_number 14595 _diffrn_reflns_theta_full 27.48 _diffrn_reflns_theta_max 27.48 _exptl_absorpt_coefficient_mu 0.221 _exptl_absorpt_correction_T_max 0.925 _exptl_absorpt_correction_T_min 0.694 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(Higashi, 1995)' _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.307 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_size_max 0.550 _exptl_crystal_size_mid 0.350 _exptl_crystal_size_min 0.350 _refine_diff_density_max 0.50 _refine_diff_density_min -0.31 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 2.843 _refine_ls_hydrogen_treatment noref _refine_ls_number_parameters 190 _refine_ls_number_reflns 2490 _refine_ls_R_factor_gt 0.0744 _refine_ls_shift/su_max 0.0805 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(Fo^2^) + (0.05000(Max(Fo^2^,0) + 2Fc^2^)/3)^2^]' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref 0.1844 _reflns_number_gt 2490 _reflns_number_total 3581 _reflns_threshold_expression F^2^>3.0\s(F^2^) _cod_data_source_file ol800754w-file003.cif _cod_data_source_block 1620 _cod_original_cell_volume 1562.0(1) _cod_original_formula_sum 'C15 H17 N O4 S ' _cod_database_code 1504694 loop_ _symmetry_equiv_pos_as_xyz x,y,z 1/2-x,1/2+y,-z -x,-y,-z 1/2+x,1/2-y,z loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_calc_flag S(1) S -0.94978(9) -0.34915(6) 0.4921(1) 0.0634(3) Uani 1.00 d O(1) O -0.8367(2) -0.2220(2) 0.7219(2) 0.0554(6) Uani 1.00 d O(5) O -0.7563(4) -0.4501(2) 1.2282(3) 0.0946(10) Uani 1.00 d O(6) O -0.9841(3) -0.4336(2) 1.1109(3) 0.085(1) Uani 1.00 d O(7) O -1.4040(2) -0.2926(2) 0.1997(3) 0.0881(9) Uani 1.00 d N(2) N -0.8683(4) -0.4214(2) 1.1261(3) 0.0662(9) Uani 1.00 d C(1) C -1.0462(3) -0.2563(2) 0.4863(3) 0.0445(7) Uani 1.00 d C(2) C -0.9553(3) -0.1830(2) 0.5927(3) 0.0482(8) Uani 1.00 d C(4) C -0.7292(3) -0.2913(2) 0.9428(4) 0.0574(9) Uani 1.00 d C(5) C -0.9835(3) -0.3034(2) 0.7872(3) 0.0549(9) Uani 1.00 d C(6) C -0.8827(4) -0.1314(2) 0.5304(4) 0.0584(9) Uani 1.00 d C(7) C -0.8632(3) -0.3709(2) 1.0169(4) 0.0541(9) Uani 1.00 d C(9) C -0.9870(3) -0.3529(2) 0.8903(4) 0.0539(9) Uani 1.00 d C(10) C -0.7330(3) -0.3413(2) 1.0442(3) 0.0586(9) Uani 1.00 d C(11) C -1.0368(4) -0.1181(2) 0.6301(4) 0.064(1) Uani 1.00 d C(12) C -1.2786(4) -0.3082(3) 0.2778(4) 0.067(1) Uani 1.00 d C(14) C -1.2153(6) -0.3913(5) 0.2637(9) 0.184(3) Uani 1.00 d C(15) C -1.0813(6) -0.4058(4) 0.3373(6) 0.117(2) Uani 1.00 d C(16) C -0.8545(3) -0.2716(2) 0.8144(3) 0.0495(8) Uani 1.00 d C(17) C -1.1858(3) -0.2460(2) 0.3909(3) 0.0496(8) Uani 1.00 d C(18) C -1.3161(7) -0.4468(5) 0.1341(8) 0.158(3) Uani 1.00 d H(1) H -0.6390 -0.2699 0.9611 0.0693 Uiso 1.00 calc H(2) H -1.0693 -0.2911 0.6976 0.0646 Uiso 1.00 calc H(3) H -1.0761 -0.3749 0.8718 0.0655 Uiso 1.00 calc H(4) H -0.6477 -0.3558 1.1333 0.0694 Uiso 1.00 calc H(5) H -0.8264 -0.1709 0.5119 0.0697 Uiso 1.00 calc H(6) H -0.9502 -0.1024 0.4431 0.0697 Uiso 1.00 calc H(7) H -0.8197 -0.0864 0.5964 0.0697 Uiso 1.00 calc H(8) H -0.9750 -0.0712 0.6896 0.0765 Uiso 1.00 calc H(9) H -1.1139 -0.0922 0.5446 0.0765 Uiso 1.00 calc H(10) H -1.0726 -0.1486 0.6790 0.0765 Uiso 1.00 calc H(11) H -1.2277 -0.1911 0.3977 0.0593 Uiso 1.00 calc H(12) H -1.4159 -0.4359 0.1007 0.1906 Uiso 1.00 calc H(13) H -1.3030 -0.4273 0.0608 0.1906 Uiso 1.00 calc H(14) H -1.3024 -0.5102 0.1453 0.1906 Uiso 1.00 calc H(15) H -1.2319 -0.4307 0.3405 0.2450 Uiso 1.00 calc H(16) H -1.0615 -0.3883 0.2627 0.1485 Uiso 1.00 calc H(17) H -1.0583 -0.4678 0.3543 0.1485 Uiso 1.00 calc loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 S(1) 0.0469(4) 0.0584(5) 0.0747(7) 0.0077(4) 0.0259(4) -0.0003(5) O(1) 0.0338(9) 0.074(1) 0.044(1) -0.0069(9) 0.0112(9) 0.011(1) O(5) 0.110(2) 0.081(2) 0.058(2) -0.001(2) 0.022(2) 0.026(2) O(6) 0.112(2) 0.083(2) 0.083(2) -0.012(2) 0.067(2) 0.006(2) O(7) 0.043(1) 0.114(2) 0.065(2) -0.007(1) 0.001(1) -0.011(2) N(2) 0.093(2) 0.051(2) 0.050(2) -0.003(2) 0.035(2) 0.001(1) C(1) 0.040(1) 0.047(1) 0.043(2) 0.003(1) 0.021(1) 0.007(1) C(2) 0.039(1) 0.055(2) 0.039(2) -0.002(1) 0.013(1) 0.006(1) C(4) 0.038(1) 0.069(2) 0.047(2) -0.004(1) 0.011(1) 0.001(2) C(5) 0.034(1) 0.070(2) 0.044(2) 0.000(1) 0.010(1) 0.008(2) C(6) 0.057(2) 0.060(2) 0.049(2) -0.013(2) 0.023(2) 0.003(2) C(7) 0.062(2) 0.050(2) 0.046(2) 0.000(1) 0.026(2) 0.001(1) C(9) 0.046(2) 0.060(2) 0.053(2) 0.001(1) 0.025(2) 0.007(2) C(10) 0.047(2) 0.065(2) 0.040(2) 0.004(1) 0.007(1) 0.006(2) C(11) 0.059(2) 0.061(2) 0.059(2) -0.003(2) 0.024(2) -0.008(2) C(12) 0.048(2) 0.081(2) 0.055(2) -0.005(2) 0.017(2) -0.005(2) C(14) 0.069(3) 0.151(5) 0.214(8) 0.009(3) -0.002(4) -0.130(6) C(15) 0.099(3) 0.105(4) 0.099(4) 0.030(3) 0.022(3) -0.042(3) C(16) 0.039(1) 0.057(2) 0.039(2) -0.002(1) 0.013(1) 0.003(1) C(17) 0.041(1) 0.055(2) 0.043(2) 0.000(1) 0.017(1) 0.003(1) C(18) 0.118(4) 0.139(5) 0.146(6) -0.025(4) 0.026(4) -0.095(5) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.003 0.002 ;International Tables for Crystallography (1992, Vol. C, Tables 4.2.6.8 and 6.1.1.1) ; H H 0.000 0.000 ;International Tables for Crystallography (1992, Vol. C, Table 6.1.1.2) ; N N 0.006 0.003 ;International Tables for Crystallography (1992, Vol. C, Tables 4.2.6.8 and 6.1.1.1) ; O O 0.011 0.006 ;International Tables for Crystallography (1992, Vol. C, Tables 4.2.6.8 and 6.1.1.1) ; S S 0.125 0.123 ;International Tables for Crystallography (1992, Vol. C, Tables 4.2.6.8 and 6.1.1.1) ; loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C(1) S(1) C(15) 99.9(2) yes C(2) O(1) C(16) 122.4(2) yes O(5) N(2) O(6) 123.4(3) yes O(5) N(2) C(7) 118.2(3) yes O(6) N(2) C(7) 118.4(3) yes S(1) C(1) C(2) 113.8(2) yes S(1) C(1) C(17) 123.7(2) yes C(2) C(1) C(17) 122.3(3) yes O(1) C(2) C(1) 110.4(2) yes O(1) C(2) C(6) 103.0(2) yes O(1) C(2) C(11) 110.3(3) yes C(1) C(2) C(6) 107.9(3) yes C(1) C(2) C(11) 114.7(2) yes C(6) C(2) C(11) 110.0(3) yes C(10) C(4) C(16) 119.9(3) yes C(9) C(5) C(16) 119.5(3) yes N(2) C(7) C(9) 119.1(3) yes N(2) C(7) C(10) 119.3(3) yes C(9) C(7) C(10) 121.6(3) yes C(5) C(9) C(7) 119.5(3) yes C(4) C(10) C(7) 119.1(3) yes O(7) C(12) C(14) 121.5(4) yes O(7) C(12) C(17) 120.5(4) yes C(14) C(12) C(17) 117.9(3) yes C(12) C(14) C(15) 122.5(4) yes C(12) C(14) C(18) 114.1(5) yes C(15) C(14) C(18) 122.0(5) yes S(1) C(15) C(14) 128.0(4) yes O(1) C(16) C(4) 114.3(3) yes O(1) C(16) C(5) 125.2(3) yes C(4) C(16) C(5) 120.4(3) yes C(1) C(17) C(12) 126.5(3) yes loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag S(1) C(1) 1.737(3) yes S(1) C(15) 1.763(5) yes O(1) C(2) 1.451(4) yes O(1) C(16) 1.365(4) yes O(5) N(2) 1.227(4) yes O(6) N(2) 1.226(4) yes O(7) C(12) 1.209(4) yes N(2) C(7) 1.454(4) yes C(1) C(2) 1.527(4) yes C(1) C(17) 1.342(4) yes C(2) C(6) 1.528(4) yes C(2) C(11) 1.533(5) yes C(4) C(10) 1.371(5) yes C(4) C(16) 1.388(4) yes C(5) C(9) 1.381(4) yes C(5) C(16) 1.388(4) yes C(7) C(9) 1.366(4) yes C(7) C(10) 1.389(4) yes C(12) C(14) 1.478(7) yes C(12) C(17) 1.454(5) yes C(14) C(15) 1.281(7) yes C(14) C(18) 1.510(7) yes loop_ _geom_contact_atom_site_label_1 _geom_contact_atom_site_label_2 _geom_contact_distance _geom_contact_site_symmetry_2 O(1) C(9) 3.487(4) 4_545 O(5) C(17) 3.306(4) 4_546 O(5) C(6) 3.529(4) 2_347 O(6) O(6) 3.029(6) 3_347 O(6) N(2) 3.108(4) 3_347 O(6) C(9) 3.205(4) 3_347 O(6) C(15) 3.257(7) 1_556 O(6) C(7) 3.294(4) 3_347 O(6) O(7) 3.501(4) 4_546 O(7) C(4) 3.191(4) 1_454 O(7) C(10) 3.193(4) 1_454 O(7) C(7) 3.361(5) 4_444 O(7) N(2) 3.378(4) 4_444 N(2) C(17) 3.549(4) 4_546 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag S(1) C(1) C(2) O(1) -33.3(3) yes S(1) C(1) C(2) C(6) 78.5(3) yes S(1) C(1) C(2) C(11) -158.6(2) yes S(1) C(1) C(17) C(12) -0.5(5) yes S(1) C(15) C(14) C(12) 15(1) yes S(1) C(15) C(14) C(18) -178.8(6) yes O(1) C(2) C(1) C(17) 151.3(3) yes O(1) C(16) C(4) C(10) -179.5(3) yes O(1) C(16) C(5) C(9) 180.0(3) yes O(5) N(2) C(7) C(9) 167.8(3) yes O(5) N(2) C(7) C(10) -12.9(5) yes O(6) N(2) C(7) C(9) -11.7(5) yes O(6) N(2) C(7) C(10) 167.6(3) yes O(7) C(12) C(14) C(15) 174.1(8) yes O(7) C(12) C(14) C(18) 7(1) yes O(7) C(12) C(17) C(1) 178.4(4) yes N(2) C(7) C(9) C(5) 178.6(3) yes N(2) C(7) C(10) C(4) -177.9(3) yes C(1) S(1) C(15) C(14) -13.8(9) yes C(1) C(2) O(1) C(16) -67.7(3) yes C(1) C(17) C(12) C(14) -0.5(7) yes C(2) O(1) C(16) C(4) -170.1(3) yes C(2) O(1) C(16) C(5) 11.5(5) yes C(2) C(1) S(1) C(15) -169.4(3) yes C(2) C(1) C(17) C(12) 174.4(3) yes C(4) C(10) C(7) C(9) 1.4(5) yes C(4) C(16) C(5) C(9) 1.7(5) yes C(5) C(9) C(7) C(10) -0.7(5) yes C(5) C(16) C(4) C(10) -1.0(5) yes C(6) C(2) O(1) C(16) 177.4(3) yes C(6) C(2) C(1) C(17) -96.9(3) yes C(7) C(9) C(5) C(16) -0.8(5) yes C(7) C(10) C(4) C(16) -0.5(5) yes C(11) C(2) O(1) C(16) 60.1(4) yes C(11) C(2) C(1) C(17) 26.0(4) yes C(15) S(1) C(1) C(17) 5.9(4) yes C(15) C(14) C(12) C(17) -7(1) yes C(17) C(12) C(14) C(18) -173.8(6) yes C(17) C(12) C(14) C(18) -173.8(6) yes