#------------------------------------------------------------------------------ #$Date: 2016-02-14 06:40:26 +0200 (Sun, 14 Feb 2016) $ #$Revision: 176432 $ #$URL: file:///home/coder/svn-repositories/cod/cif/1/51/26/1512672.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_1512672 loop_ _publ_author_name 'Sudeshna Roy' 'Palanisamy Uma Maheswari' 'Amalija Golobic' 'Bojan Kozlevcar' 'Jan Reedijk' _publ_section_title ; Synthesis, crystal structure and biological studies of the highly anticancer active compound trans-dichloridobis(4-methyl-2-N-(2-pyridylmethylene)- aminophenol)ruthenium(II) ; _journal_name_full ; Inorganica Chimica Acta ; _journal_page_first 239 _journal_page_last 245 _journal_paper_doi 10.1016/j.ica.2012.07.023 _journal_volume 393 _journal_year 2012 _chemical_formula_moiety 'C26 H24 Cl2 N4 O2 Ru, 2 (C3 H6 O)' _chemical_formula_sum 'C32 H36 Cl2 N4 O4 Ru' _chemical_formula_weight 712.62 _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens other _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 91.625(1) _cell_angle_beta 107.003(1) _cell_angle_gamma 92.203(1) _cell_formula_units_Z 1 _cell_length_a 8.8760(2) _cell_length_b 9.0154(2) _cell_length_c 10.4403(3) _cell_measurement_reflns_used 3368 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 27.48 _cell_measurement_theta_min 2.55 _cell_volume 797.65(3) _computing_cell_refinement 'DENZO-SMN (Otwinowski & Minor, 1997)' _computing_data_collection 'COLLECT (Nonius, 2000)' _computing_data_reduction 'DENZO-SMN (Otwinowski & Minor, 1997)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 2008)' _computing_structure_solution 'SIR97 (Altomare et al., 1999)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.990 _diffrn_measured_fraction_theta_max 0.990 _diffrn_measurement_device_type 'Nonius Kappa CCD' _diffrn_measurement_method '\f and \w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source xray_tube _diffrn_radiation_type 'Mo K\a' _diffrn_radiation_wavelength .71073 _diffrn_reflns_av_R_equivalents .029 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min -11 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -10 _diffrn_reflns_limit_l_max 13 _diffrn_reflns_limit_l_min -13 _diffrn_reflns_number 13273 _diffrn_reflns_theta_full 27.38 _diffrn_reflns_theta_max 27.38 _exptl_absorpt_coefficient_mu .701 _exptl_absorpt_correction_T_max 0.96 _exptl_absorpt_correction_T_min 0.88 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(DENZO-SMN; Otwinovski, Minor 1997)' _exptl_crystal_colour brown _exptl_crystal_density_diffrn 1.484 _exptl_crystal_description prism _exptl_crystal_F_000 366 _exptl_crystal_size_max 0.18 _exptl_crystal_size_mid 0.14 _exptl_crystal_size_min 0.06 _refine_diff_density_max 0.315 _refine_diff_density_min -0.570 _refine_diff_density_rms 0.060 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.141 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 203 _refine_ls_number_reflns 3592 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.141 _refine_ls_R_factor_all 0.0286 _refine_ls_R_factor_gt 0.0258 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0280P)^2^+0.2138P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0687 _refine_ls_wR_factor_ref 0.0704 _reflns_number_gt 3409 _reflns_number_total 3592 _reflns_threshold_expression >2\s(I) _cod_data_source_file ICA-2012-393-239-245.cif _cod_data_source_block k973 _cod_original_sg_symbol_Hall -p_1 _cod_original_sg_symbol_H-M P_-1 _cod_database_code 1512672 loop_ _symmetry_equiv_pos_as_xyz +x,+y,+z -x,-y,-z loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags Ru Ru 1.0000 0.0000 1.0000 0.03229(8) Uani 1 2 d S C1 C 0.6545(2) 0.1242(2) 0.9100(2) 0.0397(4) Uani 1 1 d . C2 C 0.6247(2) 0.1575(2) 1.0313(2) 0.0456(4) Uani 1 1 d . C3 C 0.5186(3) 0.2665(3) 1.0338(3) 0.0586(6) Uani 1 1 d . H3 H 0.4997 0.2927 1.1143 0.070 Uiso 1 1 calc R C4 C 0.4417(3) 0.3357(3) 0.9200(3) 0.0634(7) Uani 1 1 d . H4 H 0.3684 0.4052 0.9242 0.076 Uiso 1 1 calc R C5 C 0.4701(3) 0.3050(3) 0.7984(3) 0.0582(6) Uani 1 1 d . C6 C 0.5793(2) 0.1992(2) 0.7961(2) 0.0475(5) Uani 1 1 d . H6 H 0.6026 0.1781 0.7165 0.057 Uiso 1 1 calc R C7 C 0.3851(4) 0.3815(3) 0.6724(3) 0.0841(9) Uani 1 1 d . H7A H 0.2783 0.3418 0.6398 0.126 Uiso 1 1 calc R H7B H 0.4378 0.3652 0.6053 0.126 Uiso 1 1 calc R H7C H 0.3853 0.4862 0.6921 0.126 Uiso 1 1 calc R C8 C 0.7056(2) -0.0913(2) 0.80840(19) 0.0416(4) Uani 1 1 d . H8 H 0.6062 -0.0853 0.7472 0.050 Uiso 1 1 calc R C9 C 0.8030(2) -0.2139(2) 0.80158(19) 0.0399(4) Uani 1 1 d . C10 C 0.7464(3) -0.3393(3) 0.7190(2) 0.0533(5) Uani 1 1 d . H10 H 0.6478 -0.3413 0.6553 0.064 Uiso 1 1 calc R C11 C 0.8383(3) -0.4610(3) 0.7325(3) 0.0581(6) Uani 1 1 d . H11 H 0.8035 -0.5462 0.6778 0.070 Uiso 1 1 calc R C12 C 0.9825(3) -0.4537(2) 0.8286(2) 0.0528(5) Uani 1 1 d . H12 H 1.0457 -0.5351 0.8410 0.063 Uiso 1 1 calc R C13 C 1.0333(2) -0.3251(2) 0.9068(2) 0.0442(4) Uani 1 1 d . H13 H 1.1311 -0.3224 0.9715 0.053 Uiso 1 1 calc R C14 C 0.7494(3) 0.0123(3) 0.4709(3) 0.0676(7) Uani 1 1 d . H14A H 0.6475 -0.0285 0.4699 0.101 Uiso 1 1 calc R H14B H 0.8256 -0.0088 0.5539 0.101 Uiso 1 1 calc R H14C H 0.7793 -0.0315 0.3975 0.101 Uiso 1 1 calc R C15 C 0.7428(3) 0.1759(3) 0.4573(2) 0.0563(6) Uani 1 1 d . C16 C 0.8868(3) 0.2569(3) 0.4487(3) 0.0734(7) Uani 1 1 d . H16A H 0.8653 0.3592 0.4319 0.110 Uiso 1 1 calc R H16B H 0.9200 0.2136 0.3769 0.110 Uiso 1 1 calc R H16C H 0.9690 0.2505 0.5316 0.110 Uiso 1 1 calc R O1 O 0.6909(2) 0.0907(2) 1.14710(17) 0.0584(4) Uani 1 1 d . O2 O 0.6247(3) 0.2390(3) 0.4552(3) 0.0925(7) Uani 1 1 d . N1 N 0.76077(18) 0.00993(17) 0.90215(15) 0.0361(3) Uani 1 1 d . N2 N 0.94783(18) -0.20356(17) 0.89379(15) 0.0359(3) Uani 1 1 d . Cl Cl 1.03928(6) 0.12364(6) 0.81043(5) 0.04701(13) Uani 1 1 d . H1 H 0.751(3) 0.035(3) 1.143(3) 0.066(9) Uiso 1 1 d . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Ru 0.03417(12) 0.03191(12) 0.02760(11) -0.00027(7) 0.00435(8) 0.00083(8) C1 0.0329(9) 0.0386(9) 0.0436(10) -0.0030(8) 0.0056(8) 0.0010(7) C2 0.0417(10) 0.0447(11) 0.0499(12) -0.0043(9) 0.0135(9) -0.0015(8) C3 0.0545(13) 0.0521(13) 0.0752(16) -0.0111(12) 0.0297(12) 0.0020(10) C4 0.0466(12) 0.0479(13) 0.093(2) -0.0062(13) 0.0164(13) 0.0095(10) C5 0.0459(12) 0.0421(11) 0.0755(16) 0.0028(11) 0.0000(11) 0.0062(9) C6 0.0430(11) 0.0451(11) 0.0478(12) 0.0009(9) 0.0030(9) 0.0028(9) C7 0.0737(18) 0.0612(16) 0.097(2) 0.0133(15) -0.0104(16) 0.0198(14) C8 0.0375(9) 0.0458(10) 0.0340(9) -0.0039(8) -0.0004(8) 0.0009(8) C9 0.0422(10) 0.0407(10) 0.0331(9) -0.0051(7) 0.0062(8) -0.0014(8) C10 0.0507(12) 0.0560(13) 0.0461(12) -0.0168(10) 0.0057(9) -0.0053(10) C11 0.0654(14) 0.0445(12) 0.0623(14) -0.0196(10) 0.0189(12) -0.0086(10) C12 0.0595(13) 0.0352(10) 0.0666(15) -0.0033(10) 0.0237(11) 0.0023(9) C13 0.0440(10) 0.0361(10) 0.0510(12) 0.0029(8) 0.0116(9) 0.0011(8) C14 0.0759(17) 0.0678(16) 0.0521(14) 0.0021(12) 0.0079(12) 0.0044(13) C15 0.0534(13) 0.0703(15) 0.0407(12) 0.0008(10) 0.0058(10) 0.0111(11) C16 0.0682(17) 0.0775(18) 0.0726(18) 0.0062(14) 0.0174(14) 0.0031(14) O1 0.0672(11) 0.0666(11) 0.0459(9) 0.0015(8) 0.0224(8) 0.0125(9) O2 0.0671(13) 0.0976(16) 0.1156(19) 0.0075(14) 0.0274(12) 0.0314(12) N1 0.0364(8) 0.0372(8) 0.0319(8) 0.0007(6) 0.0059(6) 0.0019(6) N2 0.0392(8) 0.0348(7) 0.0322(8) -0.0001(6) 0.0087(6) 0.0001(6) Cl 0.0542(3) 0.0499(3) 0.0361(3) 0.0082(2) 0.0115(2) 0.0008(2) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source Ru Ru -1.2594 0.8363 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 N1 Ru N1 180.000(1) . 2_757 N1 Ru N2 77.62(6) . . N1 Ru N2 102.38(6) 2_757 . N1 Ru N2 102.38(6) . 2_757 N1 Ru N2 77.62(6) 2_757 2_757 N2 Ru N2 180.000(1) . 2_757 N1 Ru Cl 94.41(4) . 2_757 N1 Ru Cl 85.59(4) 2_757 2_757 N2 Ru Cl 87.81(4) . 2_757 N2 Ru Cl 92.19(4) 2_757 2_757 N1 Ru Cl 85.59(4) . . N1 Ru Cl 94.41(4) 2_757 . N2 Ru Cl 92.19(4) . . N2 Ru Cl 87.81(4) 2_757 . Cl Ru Cl 180.0 2_757 . C6 C1 C2 120.04(18) . . C6 C1 N1 120.01(18) . . C2 C1 N1 119.94(18) . . O1 C2 C3 117.3(2) . . O1 C2 C1 124.61(19) . . C3 C2 C1 118.1(2) . . C4 C3 C2 121.2(2) . . C4 C3 H3 119.4 . . C2 C3 H3 119.4 . . C3 C4 C5 121.8(2) . . C3 C4 H4 119.1 . . C5 C4 H4 119.1 . . C4 C5 C6 117.3(2) . . C4 C5 C7 121.8(2) . . C6 C5 C7 120.9(3) . . C1 C6 C5 121.6(2) . . C1 C6 H6 119.2 . . C5 C6 H6 119.2 . . C5 C7 H7A 109.5 . . C5 C7 H7B 109.5 . . H7A C7 H7B 109.5 . . C5 C7 H7C 109.5 . . H7A C7 H7C 109.5 . . H7B C7 H7C 109.5 . . N1 C8 C9 117.84(17) . . N1 C8 H8 121.1 . . C9 C8 H8 121.1 . . N2 C9 C10 122.96(19) . . N2 C9 C8 114.21(16) . . C10 C9 C8 122.39(18) . . C11 C10 C9 119.0(2) . . C11 C10 H10 120.5 . . C9 C10 H10 120.5 . . C12 C11 C10 118.5(2) . . C12 C11 H11 120.7 . . C10 C11 H11 120.7 . . C11 C12 C13 119.8(2) . . C11 C12 H12 120.1 . . C13 C12 H12 120.1 . . N2 C13 C12 123.0(2) . . N2 C13 H13 118.5 . . C12 C13 H13 118.5 . . C15 C14 H14A 109.5 . . C15 C14 H14B 109.5 . . H14A C14 H14B 109.5 . . C15 C14 H14C 109.5 . . H14A C14 H14C 109.5 . . H14B C14 H14C 109.5 . . O2 C15 C16 121.8(3) . . O2 C15 C14 121.0(3) . . C16 C15 C14 117.2(2) . . C15 C16 H16A 109.5 . . C15 C16 H16B 109.5 . . H16A C16 H16B 109.5 . . C15 C16 H16C 109.5 . . H16A C16 H16C 109.5 . . H16B C16 H16C 109.5 . . C2 O1 H1 115(2) . . C8 N1 C1 115.47(16) . . C8 N1 Ru 114.42(13) . . C1 N1 Ru 129.41(12) . . C13 N2 C9 116.64(16) . . C13 N2 Ru 129.52(13) . . C9 N2 Ru 113.79(12) . . loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 Ru N1 2.0765(15) . Ru N1 2.0765(15) 2_757 Ru N2 2.0811(15) . Ru N2 2.0811(15) 2_757 Ru Cl 2.4042(5) 2_757 Ru Cl 2.4042(5) . C1 C6 1.390(3) . C1 C2 1.394(3) . C1 N1 1.440(2) . C2 O1 1.350(3) . C2 C3 1.392(3) . C3 C4 1.366(4) . C3 H3 0.9300 . C4 C5 1.387(4) . C4 H4 0.9300 . C5 C6 1.391(3) . C5 C7 1.512(4) . C6 H6 0.9300 . C7 H7A 0.9600 . C7 H7B 0.9600 . C7 H7C 0.9600 . C8 N1 1.290(2) . C8 C9 1.443(3) . C8 H8 0.9300 . C9 N2 1.360(2) . C9 C10 1.386(3) . C10 C11 1.378(3) . C10 H10 0.9300 . C11 C12 1.374(3) . C11 H11 0.9300 . C12 C13 1.380(3) . C12 H12 0.9300 . C13 N2 1.344(2) . C13 H13 0.9300 . C14 C15 1.488(4) . C14 H14A 0.9600 . C14 H14B 0.9600 . C14 H14C 0.9600 . C15 O2 1.206(3) . C15 C16 1.475(4) . C16 H16A 0.9600 . C16 H16B 0.9600 . C16 H16C 0.9600 . O1 H1 0.75(3) .