#------------------------------------------------------------------------------ #$Date: 2016-02-18 17:37:37 +0200 (Thu, 18 Feb 2016) $ #$Revision: 176729 $ #$URL: file:///home/coder/svn-repositories/cod/cif/1/51/48/1514800.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_1514800 loop_ _publ_author_name 'Chen, Yong-Qiang' 'Li, Guo-Rong' 'Chang, Ze' 'Qu, Yang-Kun' 'Zhang, Ying-Hui' 'Bu, Xian-He' _publ_section_title ; A Cu(i) metal--organic framework with 4-fold helical channels for sensing anions ; _journal_issue 9 _journal_name_full 'Chemical Science' _journal_page_first 3678 _journal_paper_doi 10.1039/c3sc00057e _journal_volume 4 _journal_year 2013 _chemical_formula_sum 'C21 H18 Cu N5 O4' _chemical_formula_weight 467.94 _chemical_name_systematic ; ? ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 106.94(3) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 9.930(2) _cell_length_b 9.3445(19) _cell_length_c 22.717(6) _cell_measurement_temperature 293(2) _cell_measurement_theta_max 25 _cell_measurement_theta_min 3.01 _cell_volume 2016.5(8) _computing_cell_refinement SMART _computing_data_collection 'CrystalClear (Rigaku/MSC Inc., 2005)' _computing_data_reduction 'CrystalClear (Rigaku/MSC Inc., 2005)' _computing_molecular_graphics 'SHELXTL (Bruker, 1998)' _computing_publication_material SHELXTL _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.995 _diffrn_measured_fraction_theta_max 0.995 _diffrn_measurement_device_type scx-mini _diffrn_measurement_method '\w scan' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.1846 _diffrn_reflns_av_sigmaI/netI 0.1660 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min -11 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 26 _diffrn_reflns_limit_l_min -26 _diffrn_reflns_number 14873 _diffrn_reflns_theta_full 25.00 _diffrn_reflns_theta_max 25.00 _diffrn_reflns_theta_min 3.01 _exptl_absorpt_coefficient_mu 1.123 _exptl_absorpt_correction_T_max 0.781 _exptl_absorpt_correction_T_min 0.721 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details 'SADABS (Bruker, 1998)' _exptl_crystal_colour orange _exptl_crystal_density_diffrn 1.541 _exptl_crystal_density_method 'not measured' _exptl_crystal_description BLOCK _exptl_crystal_F_000 960 _exptl_crystal_size_max 0.30 _exptl_crystal_size_mid 0.28 _exptl_crystal_size_min 0.22 _refine_diff_density_max 0.481 _refine_diff_density_min -0.439 _refine_diff_density_rms 0.086 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.028 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 282 _refine_ls_number_reflns 3532 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.028 _refine_ls_R_factor_all 0.2335 _refine_ls_R_factor_gt 0.1033 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0924P)^2^+0.7473P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.2001 _refine_ls_wR_factor_ref 0.2574 _reflns_number_gt 1515 _reflns_number_total 3532 _reflns_threshold_expression >2sigma(I) _cod_data_source_file c3sc00057e.txt _cod_data_source_block 1a _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /usr/data/users/saulius/automatic-downloads/retrospective/RSC/lib/dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26. '_exptl_absorpt_correction_type' value 'Multi-Scan' changed to 'multi-scan' according to /usr/data/users/saulius/automatic-downloads/retrospective/RSC/lib/dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26. Automatic conversion script Id: cif_fix_values 2281 2013-09-26 08:29:07Z andrius ; _cod_original_sg_symbol_H-M 'P 21/c' _cod_database_code 1514800 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags O2 O 0.3458(9) 0.8644(10) 0.8688(4) 0.122(3) Uani 1 1 d . O1 O 0.5202(8) 0.7983(9) 0.8369(4) 0.098(2) Uani 1 1 d . Cu1 Cu 0.19384(13) 0.12252(15) -0.15267(5) 0.0780(6) Uani 1 1 d . O3 O 0.5547(8) 0.9135(9) 0.9227(4) 0.104(3) Uani 1 1 d . O4 O 0.6795(9) 0.3544(12) 0.2589(4) 0.135(3) Uani 1 1 d . H4B H 0.6408 0.3095 0.2275 0.202 Uiso 1 1 calc R N1 N 0.3519(7) 0.2531(8) -0.1138(4) 0.060(2) Uani 1 1 d . N2 N 1.1124(9) 0.4128(9) 0.2579(4) 0.069(2) Uani 1 1 d . N3 N 1.0857(8) 1.0115(8) -0.1050(4) 0.063(2) Uani 1 1 d . N4 N 0.7823(8) 0.4737(8) 0.0388(3) 0.063(2) Uani 1 1 d . N5 N 0.4746(11) 0.8630(11) 0.8767(5) 0.081(3) Uani 1 1 d . C1 C 0.3879(9) 0.3703(10) -0.1396(4) 0.063(3) Uani 1 1 d . H1 H 0.3306 0.3966 -0.1782 0.075 Uiso 1 1 calc R C2 C 0.5031(9) 0.4550(10) -0.1133(4) 0.064(3) Uani 1 1 d . H2 H 0.5245 0.5319 -0.1349 0.077 Uiso 1 1 calc R C3 C 0.5892(8) 0.4238(9) -0.0527(4) 0.046(2) Uani 1 1 d . C4 C 0.5473(9) 0.3041(10) -0.0263(4) 0.067(3) Uani 1 1 d . H4A H 0.5984 0.2781 0.0135 0.080 Uiso 1 1 calc R C5 C 0.4323(11) 0.2224(10) -0.0570(5) 0.073(3) Uani 1 1 d . H5 H 0.4100 0.1425 -0.0373 0.088 Uiso 1 1 calc R C6 C 0.7169(8) 0.5100(9) -0.0222(4) 0.046(2) Uani 1 1 d . C7 C 0.7688(9) 0.6186(9) -0.0493(4) 0.050(2) Uani 1 1 d . H7 H 0.7227 0.6448 -0.0896 0.060 Uiso 1 1 calc R C8 C 0.8915(9) 0.6909(9) -0.0165(4) 0.050(2) Uani 1 1 d . C9 C 0.9549(7) 0.6521(8) 0.0428(4) 0.039(2) Uani 1 1 d . H9 H 1.0355 0.7003 0.0652 0.047 Uiso 1 1 calc R C10 C 0.9037(9) 0.5455(9) 0.0699(4) 0.053(2) Uani 1 1 d . C11 C 0.9523(9) 0.8046(10) -0.0464(4) 0.053(2) Uani 1 1 d . C12 C 0.8812(9) 0.8683(10) -0.1023(4) 0.064(3) Uani 1 1 d . H12 H 0.7883 0.8434 -0.1220 0.077 Uiso 1 1 calc R C13 C 0.9487(10) 0.9686(10) -0.1287(4) 0.068(3) Uani 1 1 d . H13 H 0.8966 1.0102 -0.1654 0.082 Uiso 1 1 calc R C14 C 1.0904(9) 0.8512(9) -0.0210(4) 0.053(2) Uani 1 1 d . H14 H 1.1433 0.8137 0.0165 0.063 Uiso 1 1 calc R C15 C 0.9759(9) 0.4996(10) 0.1351(4) 0.056(2) Uani 1 1 d . C16 C 0.9178(9) 0.3985(10) 0.1642(4) 0.066(3) Uani 1 1 d . H16 H 0.8311 0.3579 0.1441 0.079 Uiso 1 1 calc R C17 C 0.9890(12) 0.3571(12) 0.2238(5) 0.085(3) Uani 1 1 d . H17 H 0.9486 0.2855 0.2415 0.103 Uiso 1 1 calc R C18 C 1.1634(10) 0.5126(12) 0.2280(5) 0.076(3) Uani 1 1 d . H18 H 1.2483 0.5548 0.2495 0.092 Uiso 1 1 calc R C19 C 1.1029(10) 0.5593(10) 0.1686(4) 0.068(3) Uani 1 1 d . H19 H 1.1464 0.6293 0.1514 0.082 Uiso 1 1 calc R C20 C 0.5899(16) 0.3689(18) 0.2934(7) 0.161(7) Uani 1 1 d . H20A H 0.5109 0.3063 0.2780 0.242 Uiso 1 1 calc R H20B H 0.5576 0.4662 0.2914 0.242 Uiso 1 1 calc R H20C H 0.6377 0.3447 0.3354 0.242 Uiso 1 1 calc R C22 C 1.1512(9) 0.9520(11) -0.0502(5) 0.067(3) Uani 1 1 d . H22 H 1.2431 0.9804 -0.0306 0.081 Uiso 1 1 calc R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O2 0.057(5) 0.162(9) 0.142(8) -0.007(6) 0.019(5) 0.005(6) O1 0.080(6) 0.110(6) 0.097(6) -0.018(5) 0.012(5) -0.006(5) Cu1 0.0621(9) 0.0881(11) 0.0736(10) -0.0080(7) 0.0039(6) -0.0301(7) O3 0.080(6) 0.139(7) 0.077(5) -0.010(5) -0.004(4) -0.007(5) O4 0.101(7) 0.163(10) 0.121(8) -0.026(6) 0.001(6) 0.010(7) N1 0.034(5) 0.064(6) 0.077(6) 0.000(4) 0.010(4) -0.012(4) N2 0.070(6) 0.073(6) 0.064(6) 0.008(5) 0.017(5) 0.007(5) N3 0.047(5) 0.060(5) 0.071(6) -0.001(4) 0.002(4) 0.000(4) N4 0.051(5) 0.059(5) 0.074(6) -0.009(4) 0.011(4) -0.009(4) N5 0.057(7) 0.093(7) 0.079(7) -0.005(6) -0.002(6) 0.012(6) C1 0.051(6) 0.068(7) 0.061(6) 0.017(5) 0.003(5) -0.016(6) C2 0.054(6) 0.059(6) 0.076(7) 0.005(5) 0.013(5) -0.026(5) C3 0.026(5) 0.056(6) 0.053(6) 0.000(4) 0.006(4) -0.002(4) C4 0.044(6) 0.064(7) 0.085(7) 0.015(6) 0.009(5) -0.016(6) C5 0.061(7) 0.063(7) 0.087(8) 0.010(6) 0.006(6) -0.030(6) C6 0.019(4) 0.052(6) 0.063(6) -0.003(5) 0.004(4) -0.002(4) C7 0.042(5) 0.048(6) 0.057(6) 0.005(5) 0.010(4) 0.000(5) C8 0.033(5) 0.051(6) 0.067(7) -0.007(5) 0.016(5) -0.007(5) C9 0.020(4) 0.045(5) 0.045(5) -0.005(4) -0.001(4) -0.017(4) C10 0.041(6) 0.041(5) 0.072(7) -0.003(5) 0.009(5) -0.009(5) C11 0.031(5) 0.055(6) 0.065(6) -0.013(5) 0.001(5) 0.005(5) C12 0.032(5) 0.067(7) 0.084(7) 0.006(6) 0.006(5) -0.023(5) C13 0.038(6) 0.067(7) 0.085(7) -0.008(6) -0.004(5) -0.005(6) C14 0.035(5) 0.047(6) 0.064(6) -0.001(4) -0.004(4) -0.008(5) C15 0.040(6) 0.064(6) 0.060(6) 0.000(5) 0.010(5) -0.010(5) C16 0.041(6) 0.089(8) 0.057(6) 0.022(5) -0.002(5) -0.006(6) C17 0.071(8) 0.084(8) 0.099(9) 0.015(7) 0.022(7) 0.002(7) C18 0.049(7) 0.093(9) 0.072(8) -0.012(6) -0.005(6) -0.011(6) C19 0.050(6) 0.071(7) 0.070(7) 0.007(5) -0.002(5) -0.020(6) C20 0.125(13) 0.209(19) 0.183(16) -0.050(13) 0.098(13) -0.018(12) C22 0.036(6) 0.063(7) 0.091(8) -0.005(6) 0.000(5) -0.015(5) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cu Cu 0.3201 1.2651 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 N1 Cu1 N2 126.3(3) . 4_465 N1 Cu1 N3 123.6(3) . 1_445 N2 Cu1 N3 110.0(3) 4_465 1_445 C20 O4 H4B 109.5 . . C5 N1 C1 115.9(8) . . C5 N1 Cu1 118.1(6) . . C1 N1 Cu1 126.0(7) . . C18 N2 C17 113.1(9) . . C18 N2 Cu1 122.3(8) . 4_666 C17 N2 Cu1 123.7(8) . 4_666 C22 N3 C13 113.5(8) . . C22 N3 Cu1 121.3(6) . 1_665 C13 N3 Cu1 124.3(7) . 1_665 C10 N4 C6 118.4(8) . . O3 N5 O2 120.8(11) . . O3 N5 O1 121.2(10) . . O2 N5 O1 117.9(10) . . N1 C1 C2 125.1(8) . . N1 C1 H1 117.4 . . C2 C1 H1 117.4 . . C1 C2 C3 119.4(8) . . C1 C2 H2 120.3 . . C3 C2 H2 120.3 . . C4 C3 C2 114.3(8) . . C4 C3 C6 123.7(8) . . C2 C3 C6 122.0(8) . . C5 C4 C3 122.2(9) . . C5 C4 H4A 118.9 . . C3 C4 H4A 118.9 . . N1 C5 C4 122.9(9) . . N1 C5 H5 118.6 . . C4 C5 H5 118.6 . . C7 C6 N4 120.2(7) . . C7 C6 C3 125.0(8) . . N4 C6 C3 114.8(8) . . C6 C7 C8 120.1(8) . . C6 C7 H7 119.9 . . C8 C7 H7 119.9 . . C9 C8 C7 118.6(8) . . C9 C8 C11 120.8(7) . . C7 C8 C11 120.6(8) . . C10 C9 C8 121.5(7) . . C10 C9 H9 119.3 . . C8 C9 H9 119.3 . . C9 C10 N4 121.1(8) . . C9 C10 C15 121.6(8) . . N4 C10 C15 117.3(8) . . C14 C11 C12 114.9(9) . . C14 C11 C8 121.1(8) . . C12 C11 C8 123.9(8) . . C13 C12 C11 120.1(8) . . C13 C12 H12 119.9 . . C11 C12 H12 119.9 . . N3 C13 C12 125.4(9) . . N3 C13 H13 117.3 . . C12 C13 H13 117.3 . . C22 C14 C11 121.8(8) . . C22 C14 H14 119.1 . . C11 C14 H14 119.1 . . C16 C15 C19 117.0(9) . . C16 C15 C10 121.5(8) . . C19 C15 C10 121.4(8) . . C15 C16 C17 119.7(9) . . C15 C16 H16 120.1 . . C17 C16 H16 120.1 . . N2 C17 C16 124.9(10) . . N2 C17 H17 117.5 . . C16 C17 H17 117.5 . . N2 C18 C19 126.6(9) . . N2 C18 H18 116.7 . . C19 C18 H18 116.7 . . C18 C19 C15 118.5(9) . . C18 C19 H19 120.7 . . C15 C19 H19 120.7 . . O4 C20 H20A 109.5 . . O4 C20 H20B 109.5 . . H20A C20 H20B 109.5 . . O4 C20 H20C 109.5 . . H20A C20 H20C 109.5 . . H20B C20 H20C 109.5 . . N3 C22 C14 124.2(8) . . N3 C22 H22 117.9 . . C14 C22 H22 117.9 . . loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 O2 N5 1.239(10) . O1 N5 1.276(10) . Cu1 N1 1.981(7) . Cu1 N2 1.984(8) 4_465 Cu1 N3 2.020(8) 1_445 O3 N5 1.209(10) . O4 C20 1.353(13) . O4 H4B 0.8200 . N1 C5 1.336(11) . N1 C1 1.338(11) . N2 C18 1.337(12) . N2 C17 1.349(12) . N2 Cu1 1.984(8) 4_666 N3 C22 1.346(11) . N3 C13 1.369(10) . N3 Cu1 2.020(8) 1_665 N4 C10 1.381(10) . N4 C6 1.389(10) . C1 C2 1.376(11) . C1 H1 0.9300 . C2 C3 1.422(11) . C2 H2 0.9300 . C3 C4 1.390(11) . C3 C6 1.492(10) . C4 C5 1.382(12) . C4 H4A 0.9300 . C5 H5 0.9300 . C6 C7 1.364(10) . C7 C8 1.402(11) . C7 H7 0.9300 . C8 C9 1.359(10) . C8 C11 1.483(12) . C9 C10 1.345(11) . C9 H9 0.9300 . C10 C15 1.508(11) . C11 C14 1.394(10) . C11 C12 1.394(11) . C12 C13 1.385(11) . C12 H12 0.9300 . C13 H13 0.9300 . C14 C22 1.387(12) . C14 H14 0.9300 . C15 C16 1.373(11) . C15 C19 1.387(11) . C16 C17 1.386(13) . C16 H16 0.9300 . C17 H17 0.9300 . C18 C19 1.377(12) . C18 H18 0.9300 . C19 H19 0.9300 . C20 H20A 0.9600 . C20 H20B 0.9600 . C20 H20C 0.9600 . C22 H22 0.9300 . loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_site_symmetry_1 N2 Cu1 N1 C5 -151.6(7) 4_465 N3 Cu1 N1 C5 31.4(8) 1_445 N2 Cu1 N1 C1 27.5(9) 4_465 N3 Cu1 N1 C1 -149.5(7) 1_445 C5 N1 C1 C2 3.2(14) . Cu1 N1 C1 C2 -175.9(7) . N1 C1 C2 C3 -3.6(15) . C1 C2 C3 C4 1.5(13) . C1 C2 C3 C6 178.9(8) . C2 C3 C4 C5 0.6(13) . C6 C3 C4 C5 -176.7(9) . C1 N1 C5 C4 -0.9(14) . Cu1 N1 C5 C4 178.3(8) . C3 C4 C5 N1 -1.0(16) . C10 N4 C6 C7 -2.9(12) . C10 N4 C6 C3 178.2(7) . C4 C3 C6 C7 172.8(8) . C2 C3 C6 C7 -4.3(13) . C4 C3 C6 N4 -8.2(12) . C2 C3 C6 N4 174.6(8) . N4 C6 C7 C8 2.3(12) . C3 C6 C7 C8 -178.8(8) . C6 C7 C8 C9 -1.3(12) . C6 C7 C8 C11 177.2(7) . C7 C8 C9 C10 1.0(13) . C11 C8 C9 C10 -177.6(7) . C8 C9 C10 N4 -1.6(13) . C8 C9 C10 C15 178.4(8) . C6 N4 C10 C9 2.5(12) . C6 N4 C10 C15 -177.5(7) . C9 C8 C11 C14 15.4(12) . C7 C8 C11 C14 -163.1(8) . C9 C8 C11 C12 -167.6(9) . C7 C8 C11 C12 13.9(13) . C14 C11 C12 C13 0.6(13) . C8 C11 C12 C13 -176.6(8) . C22 N3 C13 C12 -3.4(13) . Cu1 N3 C13 C12 165.6(7) 1_665 C11 C12 C13 N3 1.6(15) . C12 C11 C14 C22 -0.7(13) . C8 C11 C14 C22 176.5(8) . C9 C10 C15 C16 175.0(8) . N4 C10 C15 C16 -5.0(13) . C9 C10 C15 C19 -4.1(13) . N4 C10 C15 C19 175.9(8) . C19 C15 C16 C17 -2.2(14) . C10 C15 C16 C17 178.7(9) . C18 N2 C17 C16 -1.3(15) . Cu1 N2 C17 C16 168.4(8) 4_666 C15 C16 C17 N2 2.6(16) . C17 N2 C18 C19 -0.1(15) . Cu1 N2 C18 C19 -170.0(8) 4_666 N2 C18 C19 C15 0.3(16) . C16 C15 C19 C18 0.9(14) . C10 C15 C19 C18 180.0(9) . C13 N3 C22 C14 3.2(13) . Cu1 N3 C22 C14 -166.2(7) 1_665 C11 C14 C22 N3 -1.3(15) .