#------------------------------------------------------------------------------ #$Date: 2014-09-06 08:19:29 +0300 (Sat, 06 Sep 2014) $ #$Revision: 123162 $ #$URL: file:///home/coder/svn-repositories/cod/cif/1/51/75/1517521.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_1517521 loop_ _publ_author_name 'Mukherjee, Manjira' 'Pal, Siddhartha' 'Lohar, Somenath' 'Sen, Buddhadeb' 'Sen, Supriti' 'Banerjee, Samya' 'Banerjee, Snehasis' 'Chattopadhyay, Pabitra' _publ_section_title ; A napthelene-pyrazol conjugate: Al(iii) ion-selective blue shifting chemosensor applicable as biomarker in aqueous solution. ; _journal_issue 19 _journal_name_full 'The Analyst' _journal_page_first 4828 _journal_page_last 4835 _journal_paper_doi 10.1039/c4an01039f _journal_volume 139 _journal_year 2014 _chemical_absolute_configuration unk _chemical_formula_sum 'C20 H15 N3 O' _chemical_formula_weight 313.36 _chemical_name_systematic ; ? ; _space_group_IT_number 19 _symmetry_space_group_name_Hall 'P 2ac 2ab' _symmetry_space_group_name_H-M 'P 21 21 21' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_date 2013-06-13T23:12:26-00:00 _audit_creation_method 'WinGX routine CIF_UPDATE' _cell_angle_alpha 90 _cell_angle_beta 90 _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 5.3994(12) _cell_length_b 14.277(4) _cell_length_c 20.499(5) _cell_measurement_temperature 296(2) _cell_volume 1580.2(7) _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 296(2) _diffrn_measured_fraction_theta_full 0.989 _diffrn_measured_fraction_theta_max 0.989 _diffrn_radiation_monochromator graphite _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0979 _diffrn_reflns_av_unetI/netI 0.1946 _diffrn_reflns_limit_h_max 4 _diffrn_reflns_limit_h_min -7 _diffrn_reflns_limit_k_max 18 _diffrn_reflns_limit_k_min -17 _diffrn_reflns_limit_l_max 24 _diffrn_reflns_limit_l_min -26 _diffrn_reflns_number 8503 _diffrn_reflns_theta_full 27.67 _diffrn_reflns_theta_max 27.67 _diffrn_reflns_theta_min 1.74 _exptl_absorpt_coefficient_mu 0.084 _exptl_absorpt_correction_type none _exptl_crystal_density_diffrn 1.317 _exptl_crystal_density_method 'not measured' _exptl_crystal_F_000 656 _exptl_crystal_size_max 0.2 _exptl_crystal_size_mid 0.09 _exptl_crystal_size_min 0.08 _refine_diff_density_max 0.192 _refine_diff_density_min -0.198 _refine_diff_density_rms 0.046 _refine_ls_abs_structure_details 'Flack H D (1983), Acta Cryst. A39, 876-881' _refine_ls_abs_structure_Flack -6(5) _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 0.93 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 217 _refine_ls_number_reflns 3602 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 0.93 _refine_ls_R_factor_all 0.2337 _refine_ls_R_factor_gt 0.0683 _refine_ls_shift/su_max 0 _refine_ls_shift/su_mean 0 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0439P)^2^+0.0000P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.114 _refine_ls_wR_factor_ref 0.1656 _reflns_number_gt 1282 _reflns_number_total 3602 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file c4an01039f1.cif _[local]_cod_data_source_block ps119_0ma _cod_database_code 1517521 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' 'x+1/2, -y+1/2, -z' '-x, y+1/2, -z+1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags C1 C 0.5627(9) 0.8441(4) 0.1696(3) 0.0561(15) Uani 1 1 d . C2 C 0.7560(10) 0.8985(4) 0.1947(3) 0.0638(16) Uani 1 1 d . H2 H 0.7819 0.9587 0.1787 0.077 Uiso 1 1 calc R C3 C 0.9051(10) 0.8645(4) 0.2419(3) 0.0661(17) Uani 1 1 d . H3 H 1.0364 0.9006 0.2571 0.079 Uiso 1 1 calc R C4 C 0.8642(9) 0.7755(4) 0.2684(2) 0.0540(14) Uani 1 1 d . C5 C 1.0226(10) 0.7398(4) 0.3180(3) 0.0659(16) Uani 1 1 d . H5 H 1.1547 0.7757 0.3328 0.079 Uiso 1 1 calc R C6 C 0.9817(11) 0.6520(4) 0.3443(3) 0.0700(17) Uani 1 1 d . H6 H 1.0876 0.6289 0.3763 0.084 Uiso 1 1 calc R C7 C 0.7847(10) 0.5986(4) 0.3234(3) 0.0646(16) Uani 1 1 d . H7 H 0.7552 0.5403 0.3422 0.078 Uiso 1 1 calc R C8 C 0.6314(9) 0.6309(4) 0.2748(2) 0.0566(15) Uani 1 1 d . H8 H 0.5011 0.5935 0.2606 0.068 Uiso 1 1 calc R C9 C 0.6678(9) 0.7203(3) 0.2459(2) 0.0496(13) Uani 1 1 d . C10 C 0.5107(9) 0.7559(3) 0.1947(2) 0.0457(12) Uani 1 1 d . C11 C 0.3095(9) 0.7015(3) 0.1683(2) 0.0506(14) Uani 1 1 d . H11 H 0.2753 0.6427 0.1856 0.061 Uiso 1 1 calc R C12 C -0.0228(8) 0.6828(3) 0.0947(2) 0.0428(12) Uani 1 1 d . C13 C -0.1122(9) 0.5928(3) 0.1047(2) 0.0502(13) Uani 1 1 d . H13 H -0.049 0.5478 0.1329 0.06 Uiso 1 1 calc R C14 C -0.3117(9) 0.5843(3) 0.0645(2) 0.0441(12) Uani 1 1 d . C15 C -0.4811(9) 0.5077(3) 0.0499(2) 0.0498(13) Uani 1 1 d . C16 C -0.4620(10) 0.4253(4) 0.0857(3) 0.0674(16) Uani 1 1 d . H16 H -0.341 0.4203 0.1178 0.081 Uiso 1 1 calc R C17 C -0.6188(12) 0.3509(4) 0.0746(3) 0.0808(18) Uani 1 1 d . H17 H -0.6013 0.2959 0.0984 0.097 Uiso 1 1 calc R C18 C -0.8008(12) 0.3583(4) 0.0283(3) 0.0750(18) Uani 1 1 d . H18 H -0.9077 0.3083 0.0208 0.09 Uiso 1 1 calc R C19 C -0.8251(11) 0.4387(4) -0.0068(3) 0.0704(16) Uani 1 1 d . H19 H -0.9497 0.4437 -0.0379 0.085 Uiso 1 1 calc R C20 C -0.6659(10) 0.5127(4) 0.0035(2) 0.0601(15) Uani 1 1 d . H20 H -0.6833 0.5669 -0.0212 0.072 Uiso 1 1 calc R N1 N 0.1757(7) 0.7336(3) 0.12089(19) 0.0498(10) Uani 1 1 d . N2 N -0.1563(7) 0.7299(3) 0.05078(18) 0.0499(11) Uani 1 1 d . N3 N -0.3315(7) 0.6682(3) 0.03292(18) 0.0492(11) Uani 1 1 d . H3A H -0.4444 0.6803 0.0046 0.059 Uiso 1 1 calc R O1 O 0.4235(6) 0.8836(2) 0.12253(17) 0.0676(11) Uani 1 1 d . H1 H 0.3562 0.8424 0.101 0.081 Uiso 1 1 calc R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 C1 0.059(4) 0.052(4) 0.057(4) 0.001(3) 0.008(3) 0.003(3) C2 0.067(4) 0.051(4) 0.073(4) -0.002(3) 0.001(3) -0.011(3) C3 0.073(4) 0.057(4) 0.068(4) -0.016(3) 0.003(3) -0.015(3) C4 0.049(3) 0.059(4) 0.054(4) -0.010(3) 0.003(3) 0.004(3) C5 0.062(4) 0.069(4) 0.066(4) -0.019(4) -0.003(3) 0.006(3) C6 0.071(4) 0.079(5) 0.059(4) -0.009(4) -0.013(3) 0.017(4) C7 0.074(4) 0.060(4) 0.060(4) 0.014(3) 0.002(3) 0.012(3) C8 0.053(4) 0.061(4) 0.055(4) 0.005(3) -0.001(3) 0.001(3) C9 0.056(4) 0.054(4) 0.039(3) -0.001(3) 0.015(3) 0.004(3) C10 0.050(3) 0.047(3) 0.040(3) 0.002(3) 0.008(3) 0.001(3) C11 0.059(4) 0.047(3) 0.047(3) 0.006(3) 0.010(3) 0.007(3) C12 0.044(3) 0.046(3) 0.039(3) 0.007(3) 0.008(2) 0.004(3) C13 0.054(3) 0.057(4) 0.039(3) 0.012(3) -0.003(3) 0.009(3) C14 0.052(3) 0.044(3) 0.036(3) 0.011(2) 0.006(3) 0.007(3) C15 0.052(4) 0.056(4) 0.041(3) 0.004(3) 0.009(3) 0.007(3) C16 0.076(4) 0.062(4) 0.064(4) 0.011(3) -0.010(3) -0.010(3) C17 0.088(5) 0.078(5) 0.077(5) 0.020(4) -0.001(4) -0.012(4) C18 0.078(5) 0.072(4) 0.075(5) -0.010(4) 0.014(4) -0.020(4) C19 0.076(4) 0.084(4) 0.051(4) -0.009(4) -0.007(3) -0.010(4) C20 0.074(4) 0.065(4) 0.041(3) 0.000(3) 0.000(3) 0.004(3) N1 0.056(3) 0.053(3) 0.041(3) 0.005(2) 0.005(2) 0.003(2) N2 0.052(3) 0.054(3) 0.044(3) 0.015(2) 0.004(2) 0.007(2) N3 0.052(3) 0.058(3) 0.038(2) 0.012(2) 0.000(2) 0.000(2) O1 0.093(3) 0.050(2) 0.059(2) 0.007(2) -0.007(2) 0.002(2) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.003 0.002 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0 0 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.006 0.003 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.011 0.006 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle O1 C1 C10 122.1(5) O1 C1 C2 116.6(5) C10 C1 C2 121.2(5) C3 C2 C1 120.6(5) C3 C2 H2 119.7 C1 C2 H2 119.7 C2 C3 C4 120.7(5) C2 C3 H3 119.6 C4 C3 H3 119.6 C3 C4 C9 120.2(5) C3 C4 C5 120.6(6) C9 C4 C5 119.2(5) C6 C5 C4 120.6(6) C6 C5 H5 119.7 C4 C5 H5 119.7 C7 C6 C5 120.2(6) C7 C6 H6 119.9 C5 C6 H6 119.9 C8 C7 C6 120.3(5) C8 C7 H7 119.9 C6 C7 H7 119.9 C7 C8 C9 121.4(5) C7 C8 H8 119.3 C9 C8 H8 119.3 C4 C9 C8 118.3(5) C4 C9 C10 119.1(5) C8 C9 C10 122.6(5) C1 C10 C11 120.2(5) C1 C10 C9 118.1(5) C11 C10 C9 121.8(4) N1 C11 C10 120.8(5) N1 C11 H11 119.6 C10 C11 H11 119.6 N2 C12 C13 112.2(4) N2 C12 N1 114.3(4) C13 C12 N1 133.5(5) C14 C13 C12 105.6(4) C14 C13 H13 127.2 C12 C13 H13 127.2 C13 C14 N3 105.7(4) C13 C14 C15 133.4(5) N3 C14 C15 120.9(4) C20 C15 C16 117.5(5) C20 C15 C14 123.7(5) C16 C15 C14 118.8(5) C17 C16 C15 121.3(5) C17 C16 H16 119.3 C15 C16 H16 119.3 C18 C17 C16 119.8(6) C18 C17 H17 120.1 C16 C17 H17 120.1 C19 C18 C17 120.0(6) C19 C18 H18 120 C17 C18 H18 120 C18 C19 C20 120.4(5) C18 C19 H19 119.8 C20 C19 H19 119.8 C19 C20 C15 121.1(5) C19 C20 H20 119.5 C15 C20 H20 119.5 C11 N1 C12 122.1(4) C12 N2 N3 103.5(4) N2 N3 C14 113.0(4) N2 N3 H3A 123.5 C14 N3 H3A 123.5 C1 O1 H1 109.5 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance C1 O1 1.348(6) C1 C10 1.388(6) C1 C2 1.399(7) C2 C3 1.350(7) C2 H2 0.93 C3 C4 1.399(6) C3 H3 0.93 C4 C9 1.400(6) C4 C5 1.423(7) C5 C6 1.382(7) C5 H5 0.93 C6 C7 1.378(7) C6 H6 0.93 C7 C8 1.375(6) C7 H7 0.93 C8 C9 1.421(6) C8 H8 0.93 C9 C10 1.442(6) C10 C11 1.441(6) C11 N1 1.295(5) C11 H11 0.93 C12 N2 1.335(5) C12 C13 1.387(6) C12 N1 1.402(6) C13 C14 1.362(6) C13 H13 0.93 C14 N3 1.365(5) C14 C15 1.456(6) C15 C20 1.381(6) C15 C16 1.389(6) C16 C17 1.377(7) C16 H16 0.93 C17 C18 1.370(8) C17 H17 0.93 C18 C19 1.361(7) C18 H18 0.93 C19 C20 1.378(6) C19 H19 0.93 C20 H20 0.93 N2 N3 1.343(5) N3 H3A 0.86 O1 H1 0.82 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion O1 C1 C2 C3 -179.9(5) C10 C1 C2 C3 3.3(8) C1 C2 C3 C4 -2.3(8) C2 C3 C4 C9 0.3(7) C2 C3 C4 C5 179.7(5) C3 C4 C5 C6 179.7(5) C9 C4 C5 C6 -0.9(7) C4 C5 C6 C7 -0.8(8) C5 C6 C7 C8 1.9(8) C6 C7 C8 C9 -1.3(8) C3 C4 C9 C8 -179.2(5) C5 C4 C9 C8 1.4(7) C3 C4 C9 C10 0.7(7) C5 C4 C9 C10 -178.7(4) C7 C8 C9 C4 -0.4(7) C7 C8 C9 C10 179.8(5) O1 C1 C10 C11 2.9(7) C2 C1 C10 C11 179.6(4) O1 C1 C10 C9 -178.9(4) C2 C1 C10 C9 -2.3(7) C4 C9 C10 C1 0.3(6) C8 C9 C10 C1 -179.9(4) C4 C9 C10 C11 178.4(4) C8 C9 C10 C11 -1.7(7) C1 C10 C11 N1 0.4(7) C9 C10 C11 N1 -177.7(4) N2 C12 C13 C14 0.1(5) N1 C12 C13 C14 180.0(5) C12 C13 C14 N3 0.0(5) C12 C13 C14 C15 177.6(5) C13 C14 C15 C20 -175.8(5) N3 C14 C15 C20 1.5(7) C13 C14 C15 C16 6.0(8) N3 C14 C15 C16 -176.7(4) C20 C15 C16 C17 1.0(8) C14 C15 C16 C17 179.3(5) C15 C16 C17 C18 -1.2(9) C16 C17 C18 C19 0.4(9) C17 C18 C19 C20 0.6(9) C18 C19 C20 C15 -0.8(8) C16 C15 C20 C19 0.0(7) C14 C15 C20 C19 -178.2(4) C10 C11 N1 C12 -179.3(4) N2 C12 N1 C11 173.5(4) C13 C12 N1 C11 -6.4(8) C13 C12 N2 N3 -0.2(5) N1 C12 N2 N3 179.9(3) C12 N2 N3 C14 0.2(5) C13 C14 N3 N2 -0.1(5) C15 C14 N3 N2 -178.1(4)