#------------------------------------------------------------------------------ #$Date: 2015-05-26 10:41:19 +0300 (Tue, 26 May 2015) $ #$Revision: 137344 $ #$URL: file:///home/coder/svn-repositories/cod/cif/1/51/99/1519960.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_1519960 loop_ _publ_author_name 'Callear, Samantha K.' 'Hursthouse, Michael B.' _publ_section_title ; Hexamethyleneiminium adipate ; _journal_name_full 'Crystal Structure Report Archive' _journal_page_first 556 _journal_year 2008 _chemical_formula_sum 'C12 H23 N O4' _chemical_formula_weight 245.31 _chemical_name_systematic ; adipic acid & hexamethyleneimine ; _space_group_IT_number 9 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall 'C -2yc' _symmetry_space_group_name_H-M 'C 1 c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _cell_angle_alpha 90.00 _cell_angle_beta 115.478(7) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 13.8261(10) _cell_length_b 11.0607(10) _cell_length_c 9.6798(9) _cell_measurement_reflns_used 2755 _cell_measurement_temperature 120(2) _cell_measurement_theta_max 27.48 _cell_measurement_theta_min 2.91 _cell_volume 1336.3(2) _computing_cell_refinement 'DENZO (Otwinowski & Minor, 1997) & COLLECT (Hooft, R.W.W., 1998)' _computing_data_collection 'COLLECT (Hooft, R.W.W., 1998)' _computing_data_reduction 'DENZO (Otwinowski & Minor, 1997) & COLLECT (Hooft, R.W.W., 1998)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _diffrn_ambient_temperature 120(2) _diffrn_detector_area_resol_mean 9.091 _diffrn_measured_fraction_theta_full 0.999 _diffrn_measured_fraction_theta_max 0.999 _diffrn_measurement_device_type 'Bruker-Nonius 95mm CCD camera on \k-goniostat' _diffrn_measurement_method '\f & \w scans' _diffrn_radiation_monochromator '10cm confocal mirrors' _diffrn_radiation_source 'Bruker-Nonius FR591 rotating anode' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0670 _diffrn_reflns_av_sigmaI/netI 0.0398 _diffrn_reflns_limit_h_max 17 _diffrn_reflns_limit_h_min -17 _diffrn_reflns_limit_k_max 14 _diffrn_reflns_limit_k_min -14 _diffrn_reflns_limit_l_max 12 _diffrn_reflns_limit_l_min -12 _diffrn_reflns_number 10127 _diffrn_reflns_theta_full 27.48 _diffrn_reflns_theta_max 27.48 _diffrn_reflns_theta_min 3.26 _exptl_absorpt_coefficient_mu 0.090 _exptl_absorpt_correction_T_max 0.9982 _exptl_absorpt_correction_T_min 0.9892 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details 'SADABS V2.10 (Sheldrick, G.M., 2003)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.219 _exptl_crystal_density_method 'not measured' _exptl_crystal_description fragment _exptl_crystal_F_000 536 _exptl_crystal_size_max 0.12 _exptl_crystal_size_mid 0.06 _exptl_crystal_size_min 0.02 _refine_diff_density_max 0.158 _refine_diff_density_min -0.200 _refine_diff_density_rms 0.044 _refine_ls_abs_structure_details 'Flack H D (1983), Acta Cryst. A39, 876-881' _refine_ls_abs_structure_Flack 10(10) _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.108 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 158 _refine_ls_number_reflns 1536 _refine_ls_number_restraints 2 _refine_ls_restrained_S_all 1.107 _refine_ls_R_factor_all 0.0541 _refine_ls_R_factor_gt 0.0438 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0302P)^2^+1.0785P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0932 _refine_ls_wR_factor_ref 0.0993 _reflns_number_gt 1348 _reflns_number_total 1536 _reflns_threshold_expression >2sigma(I) _cod_data_source_file eCrystal-556.cif _cod_data_source_block 07skc0010cc _cod_depositor_comments ; Citation : Callear, Samantha K. and Hursthouse, Michael B. (2008) University of Southampton, Crystal Structure Report Archive. (doi:10.5258/ecrystals/556) More at: http://ecrystals.chem.soton.ac.uk/556/ ; _cod_cif_authors_sg_H-M Cc _cod_database_code 1519960 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' 'x, -y, z+1/2' 'x+1/2, y+1/2, z' 'x+1/2, -y+1/2, z+1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group C1 C 0.1345(2) 0.8542(3) 0.0512(3) 0.0243(6) Uani 1 1 d . . . C2 C 0.2101(3) 0.8470(3) 0.2178(3) 0.0269(6) Uani 1 1 d . . . H2A H 0.1766 0.8871 0.2778 0.032 Uiso 1 1 calc R . . H2B H 0.2761 0.8923 0.2352 0.032 Uiso 1 1 calc R . . C3 C 0.2409(2) 0.7183(3) 0.2776(3) 0.0233(6) Uani 1 1 d . . . H3A H 0.2715 0.6761 0.2151 0.028 Uiso 1 1 calc R . . H3B H 0.1760 0.6738 0.2669 0.028 Uiso 1 1 calc R . . C4 C 0.3226(2) 0.7174(3) 0.4452(3) 0.0250(6) Uani 1 1 d . . . H4A H 0.3864 0.7644 0.4558 0.030 Uiso 1 1 calc R . . H4B H 0.2911 0.7577 0.5075 0.030 Uiso 1 1 calc R . . C5 C 0.3574(2) 0.5909(3) 0.5065(3) 0.0235(6) Uani 1 1 d . . . H5A H 0.2928 0.5425 0.4883 0.028 Uiso 1 1 calc R . . H5B H 0.3931 0.5529 0.4481 0.028 Uiso 1 1 calc R . . C6 C 0.4325(2) 0.5857(2) 0.6750(3) 0.0211(6) Uani 1 1 d . . . O1A O 0.11315(18) 0.96739(17) 0.0026(2) 0.0334(6) Uani 1 1 d . . . H1 H 0.0681 0.9679 -0.0895 0.050(12) Uiso 1 1 calc R . . O1B O 0.09722(19) 0.76757(19) -0.0307(2) 0.0374(6) Uani 1 1 d . . . O6A O 0.47976(18) 0.48500(19) 0.7245(2) 0.0317(5) Uani 1 1 d . . . O6B O 0.44357(19) 0.67504(19) 0.7574(2) 0.0364(6) Uani 1 1 d . . . C22 C -0.0722(3) 1.2876(3) 0.0824(4) 0.0300(7) Uani 1 1 d . . . H22A H -0.0413 1.3209 0.1876 0.036 Uiso 1 1 calc R . . H22B H -0.1375 1.2418 0.0673 0.036 Uiso 1 1 calc R . . C23 C -0.1028(2) 1.3910(3) -0.0308(4) 0.0304(7) Uani 1 1 d . . . H23A H -0.1683 1.4295 -0.0339 0.036 Uiso 1 1 calc R . . H23B H -0.1210 1.3571 -0.1338 0.036 Uiso 1 1 calc R . . C24 C -0.0180(3) 1.4888(3) 0.0013(4) 0.0339(7) Uani 1 1 d . . . H24A H -0.0448 1.5475 -0.0842 0.041 Uiso 1 1 calc R . . H24B H -0.0090 1.5326 0.0953 0.041 Uiso 1 1 calc R . . C25 C 0.0914(3) 1.4438(3) 0.0217(4) 0.0326(7) Uani 1 1 d . . . H25A H 0.1367 1.5143 0.0255 0.039 Uiso 1 1 calc R . . H25B H 0.0824 1.3945 -0.0685 0.039 Uiso 1 1 calc R . . C26 C 0.1493(2) 1.3681(3) 0.1661(4) 0.0305(7) Uani 1 1 d . . . H26A H 0.2274 1.3784 0.2011 0.037 Uiso 1 1 calc R . . H26B H 0.1310 1.4006 0.2472 0.037 Uiso 1 1 calc R . . C27 C 0.1241(2) 1.2341(3) 0.1493(3) 0.0272(6) Uani 1 1 d . . . H27A H 0.1622 1.1968 0.0937 0.033 Uiso 1 1 calc R . . H27B H 0.1531 1.1976 0.2526 0.033 Uiso 1 1 calc R . . N21 N 0.00720(19) 1.2026(2) 0.0670(3) 0.0249(5) Uani 1 1 d . . . H21A H -0.0096 1.1954 -0.0355 0.026(8) Uiso 1 1 calc R . . H21B H -0.0023 1.1277 0.1006 0.052(12) Uiso 1 1 calc R . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 C1 0.0257(15) 0.0254(15) 0.0216(14) 0.0022(11) 0.0101(12) 0.0048(12) C2 0.0280(15) 0.0245(15) 0.0218(14) 0.0024(11) 0.0047(12) 0.0022(12) C3 0.0244(15) 0.0236(14) 0.0184(13) 0.0028(11) 0.0058(11) 0.0016(11) C4 0.0265(15) 0.0220(14) 0.0208(13) 0.0032(11) 0.0047(11) 0.0047(12) C5 0.0262(15) 0.0220(14) 0.0172(12) -0.0005(11) 0.0046(11) 0.0017(11) C6 0.0228(14) 0.0207(14) 0.0205(13) 0.0021(11) 0.0100(11) 0.0015(11) O1A 0.0419(14) 0.0214(11) 0.0218(11) 0.0022(8) -0.0005(10) 0.0056(9) O1B 0.0492(15) 0.0251(11) 0.0218(11) 0.0016(9) -0.0001(10) 0.0013(10) O6A 0.0427(13) 0.0232(11) 0.0186(10) 0.0026(8) 0.0032(9) 0.0117(9) O6B 0.0504(14) 0.0255(11) 0.0210(11) -0.0008(9) 0.0038(10) 0.0104(10) C22 0.0310(16) 0.0287(16) 0.0323(16) 0.0007(13) 0.0154(13) -0.0015(13) C23 0.0278(16) 0.0279(16) 0.0339(16) 0.0025(13) 0.0117(13) 0.0057(12) C24 0.0378(18) 0.0253(16) 0.0366(17) 0.0024(12) 0.0142(14) 0.0053(12) C25 0.0345(17) 0.0229(15) 0.0407(17) 0.0018(13) 0.0165(14) -0.0015(12) C26 0.0246(15) 0.0289(16) 0.0336(16) -0.0015(13) 0.0085(13) -0.0049(12) C27 0.0247(15) 0.0266(15) 0.0278(15) 0.0028(12) 0.0088(12) 0.0037(12) N21 0.0291(13) 0.0197(12) 0.0220(11) -0.0002(10) 0.0075(10) -0.0001(10) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 O1B C1 O1A 123.3(3) . . O1B C1 C2 124.5(2) . . O1A C1 C2 112.2(2) . . C1 C2 C3 114.1(2) . . C1 C2 H2A 108.7 . . C3 C2 H2A 108.7 . . C1 C2 H2B 108.7 . . C3 C2 H2B 108.7 . . H2A C2 H2B 107.6 . . C2 C3 C4 111.6(2) . . C2 C3 H3A 109.3 . . C4 C3 H3A 109.3 . . C2 C3 H3B 109.3 . . C4 C3 H3B 109.3 . . H3A C3 H3B 108.0 . . C5 C4 C3 112.8(2) . . C5 C4 H4A 109.0 . . C3 C4 H4A 109.0 . . C5 C4 H4B 109.0 . . C3 C4 H4B 109.0 . . H4A C4 H4B 107.8 . . C6 C5 C4 114.4(2) . . C6 C5 H5A 108.7 . . C4 C5 H5A 108.7 . . C6 C5 H5B 108.7 . . C4 C5 H5B 108.7 . . H5A C5 H5B 107.6 . . O6B C6 O6A 123.6(3) . . O6B C6 C5 120.1(2) . . O6A C6 C5 116.3(2) . . C1 O1A H1 109.5 . . N21 C22 C23 112.9(3) . . N21 C22 H22A 109.0 . . C23 C22 H22A 109.0 . . N21 C22 H22B 109.0 . . C23 C22 H22B 109.0 . . H22A C22 H22B 107.8 . . C22 C23 C24 115.9(3) . . C22 C23 H23A 108.3 . . C24 C23 H23A 108.3 . . C22 C23 H23B 108.3 . . C24 C23 H23B 108.3 . . H23A C23 H23B 107.4 . . C25 C24 C23 115.3(3) . . C25 C24 H24A 108.4 . . C23 C24 H24A 108.4 . . C25 C24 H24B 108.4 . . C23 C24 H24B 108.4 . . H24A C24 H24B 107.5 . . C24 C25 C26 113.4(3) . . C24 C25 H25A 108.9 . . C26 C25 H25A 108.9 . . C24 C25 H25B 108.9 . . C26 C25 H25B 108.9 . . H25A C25 H25B 107.7 . . C27 C26 C25 115.6(3) . . C27 C26 H26A 108.4 . . C25 C26 H26A 108.4 . . C27 C26 H26B 108.4 . . C25 C26 H26B 108.4 . . H26A C26 H26B 107.4 . . N21 C27 C26 115.4(2) . . N21 C27 H27A 108.4 . . C26 C27 H27A 108.4 . . N21 C27 H27B 108.4 . . C26 C27 H27B 108.4 . . H27A C27 H27B 107.5 . . C22 N21 C27 117.9(2) . . C22 N21 H21A 107.8 . . C27 N21 H21A 107.8 . . C22 N21 H21B 107.8 . . C27 N21 H21B 107.8 . . H21A N21 H21B 107.2 . . loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 C1 O1B 1.208(3) . C1 O1A 1.325(3) . C1 C2 1.500(4) . C2 C3 1.526(4) . C2 H2A 0.9900 . C2 H2B 0.9900 . C3 C4 1.527(3) . C3 H3A 0.9900 . C3 H3B 0.9900 . C4 C5 1.515(4) . C4 H4A 0.9900 . C4 H4B 0.9900 . C5 C6 1.511(4) . C5 H5A 0.9900 . C5 H5B 0.9900 . C6 O6B 1.238(3) . C6 O6A 1.276(3) . O1A H1 0.8400 . C22 N21 1.500(4) . C22 C23 1.513(4) . C22 H22A 0.9900 . C22 H22B 0.9900 . C23 C24 1.526(4) . C23 H23A 0.9900 . C23 H23B 0.9900 . C24 C25 1.523(5) . C24 H24A 0.9900 . C24 H24B 0.9900 . C25 C26 1.527(4) . C25 H25A 0.9900 . C25 H25B 0.9900 . C26 C27 1.515(4) . C26 H26A 0.9900 . C26 H26B 0.9900 . C27 N21 1.504(4) . C27 H27A 0.9900 . C27 H27B 0.9900 . N21 H21A 0.9200 . N21 H21B 0.9200 . loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A O1A H1 O6A 0.84 1.70 2.533(3) 173.9 3_454 N21 H21A O6B 0.92 1.84 2.753(3) 174.1 3_454 N21 H21B O6A 0.92 1.82 2.697(3) 158.6 4_464