#------------------------------------------------------------------------------ #$Date: 2011-09-10 06:16:28 +0300 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/2005585.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2005585 loop_ _publ_author_name 'Lis, T.' _publ_section_title ; Acid Salts of Phosphoenolpyruvic Acid (H~3~PEP): NaH~5~(PEP)~2~.2H~2~O and KH~5~(PEP)~2~ ; _journal_issue 11 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 2720 _journal_page_last 2724 _journal_volume 52 _journal_year 1996 _chemical_formula_moiety 'Na 1+ , C6 H9 O12 P2 1- , 2H2 O' _chemical_formula_sum 'C6 H13 Na O14 P2' _chemical_formula_weight 394.09 _chemical_name_systematic ; sodium hydrogen bis(phosphoenolpyruvate) dihydrate ; _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _cell_angle_alpha 82.06(3) _cell_angle_beta 87.64(4) _cell_angle_gamma 83.32(4) _cell_formula_units_Z 1 _cell_length_a 5.395(3) _cell_length_b 5.742(2) _cell_length_c 11.428(4) _cell_measurement_reflns_used 60 _cell_measurement_temperature 85(2) _cell_measurement_theta_max 15 _cell_measurement_theta_min 10 _cell_volume 348.1(3) _computing_cell_refinement 'Kuma KM-4 Software' _computing_data_collection 'Kuma KM-4 Software (Kuma Diffraction, 1989)' _computing_data_reduction 'Kuma KM-4 Software' _computing_molecular_graphics 'ORTEPII (Johnson, 1976)' _computing_structure_refinement 'SHELXL93 (Sheldrick, 1993)' _computing_structure_solution 'SHELXS86 (Sheldrick, 1990)' _diffrn_ambient_temperature 85(2) _diffrn_measurement_device 'Kuma KM-4 automatic' _diffrn_measurement_method \w/2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0197 _diffrn_reflns_av_sigmaI/netI 0.0232 _diffrn_reflns_limit_h_max 3 _diffrn_reflns_limit_h_min -7 _diffrn_reflns_limit_k_max 8 _diffrn_reflns_limit_k_min -8 _diffrn_reflns_limit_l_max 16 _diffrn_reflns_limit_l_min -16 _diffrn_reflns_number 3299 _diffrn_reflns_theta_max 30 _diffrn_reflns_theta_min 3 _diffrn_standards_decay_% 3 _diffrn_standards_interval_count 100 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.422 _exptl_absorpt_correction_type none _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.880(2) _exptl_crystal_density_meas 'not measured' _exptl_crystal_description tablet _exptl_crystal_F_000 202 _exptl_crystal_size_max 0.4 _exptl_crystal_size_mid 0.4 _exptl_crystal_size_min 0.15 _refine_diff_density_max 0.61 _refine_diff_density_min -0.34 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_all 1.095 _refine_ls_goodness_of_fit_obs 1.128 _refine_ls_hydrogen_treatment refall _refine_ls_matrix_type full _refine_ls_number_parameters 134 _refine_ls_number_reflns 2024 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.095 _refine_ls_restrained_S_obs 1.128 _refine_ls_R_factor_all 0.0310 _refine_ls_R_factor_obs 0.0265 _refine_ls_shift/esd_max -0.098 _refine_ls_shift/esd_mean 0.012 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_scheme 'calc w = 1/[\s^2^(Fo^2^) + (0.048P)^2^ + 0.09P] where P = (Fo^2^ + 2Fc^2^)/3' _refine_ls_wR_factor_all 0.0765 _refine_ls_wR_factor_obs 0.0741 _reflns_number_observed 1808 _reflns_number_total 2024 _reflns_observed_criterion >2sigma(I) _[local]_cod_data_source_file bm1081.cif _[local]_cod_data_source_block I _cod_database_code 2005585 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Na 0.0093(3) 0.0106(3) 0.0128(3) 0.0005(2) 0.0000(2) 0.0008(2) P 0.00651(13) 0.00706(13) 0.00683(14) -0.00036(9) 0.00020(9) -0.00081(9) O1 0.0093(3) 0.0110(4) 0.0144(4) 0.0024(3) -0.0038(3) -0.0039(3) O2 0.0093(3) 0.0083(3) 0.0114(3) -0.0015(3) -0.0005(3) 0.0002(3) O3 0.0111(3) 0.0092(3) 0.0095(3) -0.0012(3) -0.0033(3) -0.0012(2) O4 0.0130(3) 0.0098(3) 0.0103(3) -0.0026(3) 0.0051(3) -0.0020(3) O5 0.0149(4) 0.0121(4) 0.0155(4) -0.0015(3) 0.0059(3) -0.0032(3) O6 0.0134(4) 0.0128(4) 0.0136(4) -0.0008(3) 0.0065(3) 0.0011(3) O7 0.0102(3) 0.0105(3) 0.0132(4) -0.0010(3) -0.0015(3) -0.0015(3) C1 0.0101(4) 0.0129(4) 0.0075(4) -0.0017(3) 0.0006(3) -0.0009(3) C2 0.0093(4) 0.0117(4) 0.0072(4) -0.0020(3) 0.0011(3) -0.0008(3) C3 0.0126(4) 0.0120(5) 0.0109(4) -0.0012(3) 0.0018(3) -0.0006(3) loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol Na 0.5 0.5 0.5 0.0113(2) Uani d S 1 Na P 0.23317(4) 1.00821(4) 0.35084(2) 0.00680(10) Uani d . 1 P O1 -0.01990(14) 1.14547(14) 0.31174(7) 0.0115(2) Uani d . 1 O O2 0.20588(14) 0.75680(13) 0.39516(7) 0.0098(2) Uani d . 1 O O3 0.36519(14) 1.13955(13) 0.43234(7) 0.0098(2) Uani d . 1 O O4 0.40166(15) 0.99648(13) 0.23155(7) 0.0110(2) Uani d . 1 O O5 0.79159(15) 0.88861(14) 0.09730(8) 0.0142(2) Uani d . 1 O O6 0.84149(16) 1.27148(15) 0.03996(7) 0.0138(2) Uani d . 1 O O7 0.80999(15) 0.56746(14) 0.34360(7) 0.0113(2) Uani d . 1 O C1 0.7282(2) 1.1006(2) 0.09885(9) 0.0102(2) Uani d . 1 C C2 0.5060(2) 1.1855(2) 0.16960(9) 0.0094(2) Uani d . 1 C C3 0.4259(2) 1.4139(2) 0.16831(10) 0.0120(2) Uani d . 1 C H1 -0.060(4) 1.272(4) 0.326(2) 0.035(6) Uiso d . 1 H H3 0.451(8) 1.047(8) 0.476(4) 0.027(10) Uiso d P 0.50 H H6 0.943(4) 1.225(4) 0.000(2) 0.036(6) Uiso d . 1 H H31 0.287(3) 1.469(3) 0.2133(16) 0.018(4) Uiso d . 1 H H32 0.516(4) 1.538(4) 0.1248(19) 0.032(6) Uiso d . 1 H H71 0.755(4) 0.641(4) 0.284(2) 0.031(6) Uiso d . 1 H H72 0.928(4) 0.635(4) 0.364(2) 0.033(6) Uiso d . 1 H loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Na Na 0.0362 0.0249 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' P P 0.1023 0.0942 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O1 P O2 . . 111.20(10) yes O1 P O3 . . 111.40(10) yes O1 P O4 . . 105.70(10) yes O2 P O3 . . 115.60(10) yes O2 P O4 . . 104.10(10) yes O3 P O4 . . 107.90(10) yes C2 O4 P . . 124.60(10) ? O4 C2 C3 . . 127.10(10) ? O4 C2 C1 . . 110.20(10) ? C3 C2 C1 . . 122.70(10) ? O5 C1 O6 . . 124.90(10) ? O5 C1 C2 . . 121.40(10) ? O6 C1 C2 . . 113.60(10) ? O2 Na O7 . . 91.20(10) yes O2 Na O3 . 2_676 85.60(10) yes O7 Na O3 . 2_676 84.30(10) yes P O1 H1 . . 122.0(17) ? P O2 Na . . 124.86(5) ? P O3 Na . 1_565 154.40(5) ? P O3 H3 . . 109.(3) ? Na O3 H3 1_565 . 96.(3) ? C1 O6 H6 . . 111.4(18) ? Na O7 H71 . . 114.1(16) ? Na O7 H72 . . 112.6(15) ? H71 O7 H72 . . 109.(2) ? C2 C3 H31 . . 123.1(11) ? C2 C3 H32 . . 122.0(13) ? H31 C3 H32 . . 114.7(17) ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag P O1 . 1.545(2) yes P O2 . 1.484(2) yes P O3 . 1.522(2) yes P O4 . 1.612(2) yes O4 C2 . 1.376(2) ? C1 C2 . 1.490(2) ? C2 C3 . 1.330(2) ? O5 C1 . 1.228(2) ? O6 C1 . 1.309(2) ? Na O2 . 2.292(2) yes Na O7 . 2.420(2) yes Na O3 2_676 2.500(2) yes Na O2 2_666 2.292(2) ? Na O7 2_666 2.420(2) ? Na O3 1_545 2.500(2) ? Na P . 3.368(2) ? O1 H1 . 0.77(2) ? O3 H3 . 0.79(4) ? O6 H6 . 0.75(2) ? O7 H71 . 0.80(2) ? O7 H72 . 0.84(2) ? C3 H31 . 0.94(2) ? C3 H32 . 0.98(2) ? loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag O1 P O4 C2 72.90(10) yes O2 P O4 C2 -169.80(10) yes O3 P O4 C2 -46.40(10) yes P O4 C2 C3 -25.1(2) yes P O4 C2 C1 155.80(10) yes O5 C1 C2 C3 -176.6(2) ? O6 C1 C2 C3 2.7(2) ? O5 C1 C2 O4 2.5(2) ? O6 C1 C2 O4 -178.20(10) ?