#------------------------------------------------------------------------------ #$Date: 2016-02-19 16:29:56 +0200 (Fri, 19 Feb 2016) $ #$Revision: 176759 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/00/80/2008082.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2008082 loop_ _publ_author_name 'S.Shanmuga Sundara Raj' R.Thirumurugan G.Shanmugam 'Hoong-Kun Fun' J.Manonmani M.Kandaswamy _publ_section_title ;2-Hydroxy-5-methyl-3-(morpholinomethyl)benzaldehyde, (I), and 4,4'-dimethyl-6,6'-bis(morpholinomethyl)-2,2'-(ethylenedinitrilodimethylidyne)diphenol, (II) ; _journal_issue 1 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 94 _journal_page_last 97 _journal_paper_doi 10.1107/S0108270198010750 _journal_volume 55 _journal_year 1999 _chemical_formula_sum 'C13 H17 N O3' _chemical_formula_weight 235.28 _chemical_melting_point 448.15 _chemical_name_systematic ; 2-Hydroxy-5-methyl-3-(morpholinomethyl)benzaldehyde ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _audit_creation_method SHELXL _cell_angle_alpha 90.00 _cell_angle_beta 91.8460(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 5.31720(10) _cell_length_b 15.3099(3) _cell_length_c 15.34060(10) _cell_measurement_reflns_used 4735 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 33.22 _cell_measurement_theta_min 1.37 _cell_volume 1248.17(3) _computing_cell_refinement 'SAINT (Siemens, 1996b)' _computing_data_collection 'SMART (Siemens, 1996a)' _computing_data_reduction SAINT _computing_molecular_graphics SHELXTL _computing_publication_material 'SHELXTL & PARST (Nardelli, 1995)' _computing_structure_refinement SHELXTL _computing_structure_solution 'SHELXTL (Sheldrick, 1996)' _diffrn_ambient_temperature 293(2) _diffrn_measurement_device ; Siemens SMART CCD area detector diffractometer ; _diffrn_measurement_method '\w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0208 _diffrn_reflns_av_sigmaI/netI 0.0267 _diffrn_reflns_limit_h_max 6 _diffrn_reflns_limit_h_min -6 _diffrn_reflns_limit_k_max 19 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 19 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 7859 _diffrn_reflns_theta_max 27.49 _diffrn_reflns_theta_min 2.97 _exptl_absorpt_coefficient_mu 0.089 _exptl_absorpt_correction_type none _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.252 _exptl_crystal_density_meas ? _exptl_crystal_description parallelepiped _exptl_crystal_F_000 504 _exptl_crystal_size_max 0.52 _exptl_crystal_size_mid 0.42 _exptl_crystal_size_min 0.30 _refine_diff_density_max 0.264 _refine_diff_density_min -0.201 _refine_ls_extinction_coef 0.039(5) _refine_ls_extinction_method SHELXTL _refine_ls_goodness_of_fit_all 1.070 _refine_ls_goodness_of_fit_obs 1.143 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 159 _refine_ls_number_reflns 2832 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.070 _refine_ls_restrained_S_obs 1.143 _refine_ls_R_factor_all 0.0667 _refine_ls_R_factor_obs 0.0490 _refine_ls_shift/esd_max 0.000 _refine_ls_shift/esd_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(Fo^2^)+(0.0663P)^2^+0.2732P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_all 0.1487 _refine_ls_wR_factor_obs 0.1355 _reflns_number_observed 2094 _reflns_number_total 2832 _reflns_observed_criterion >2sigma(I) _cod_data_source_file ha1231.cif _cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_chemical_melting_point' value '175\%C' was changed to '448.15' - it was converted from degrees Celsius(C) to Kelvins(K). Automatic conversion script Id: cif_fix_values 1646 2011-03-28 12:23:43Z adriana The following automatic conversions were performed: '_chemical_melting_point' value '175\%C' was changed to '448.15' - it was converted from degrees Celsius(C) to Kelvins(K). Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana The following automatic conversions were performed: '_exptl_crystal_density_meas' value 'not measured' was changed to '?' - the value is perceived as not measured. Automatic conversion script Id: cif_fix_values 3008 2015-01-20 13:52:24Z robertas The following automatic conversions were performed: '_refine_ls_weighting_scheme' value 'calc w = 1/[\s^2^(Fo^2^)+(0.0663P)^2^+0.2732P] where P=(Fo^2^+2Fc^2^)/3' was changed to 'calc'. New tag '_refine_ls_weighting_details' was created. The value of the new tag was set to 'w = 1/[\s^2^(Fo^2^)+(0.0663P)^2^+0.2732P] where P=(Fo^2^+2Fc^2^)/3'. Automatic conversion script Id: cif_fix_values 3143 2015-03-26 13:38:13Z robertas ; _cod_original_sg_symbol_H-M 'P 21/c' _cod_database_code 2008082 _cod_database_fobs_code 2008082 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 C1 0.0397(7) 0.0515(8) 0.0412(7) 0.0062(6) 0.0017(6) 0.0002(6) C2 0.0502(8) 0.0432(8) 0.0462(8) 0.0052(6) 0.0024(6) -0.0049(6) C3 0.0522(9) 0.0572(10) 0.0500(9) -0.0012(7) -0.0014(7) -0.0109(7) C4 0.0515(9) 0.0708(11) 0.0426(8) 0.0103(8) -0.0030(7) -0.0046(8) C5 0.0579(10) 0.0620(10) 0.0440(8) 0.0101(8) 0.0037(7) 0.0089(7) C6 0.0472(8) 0.0533(9) 0.0459(8) 0.0020(7) 0.0055(6) 0.0037(7) O7 0.0490(6) 0.0685(8) 0.0542(7) -0.0054(6) -0.0096(5) 0.0116(6) C8 0.0666(12) 0.112(2) 0.0537(10) 0.0081(12) -0.0141(9) -0.0056(11) C9 0.0712(11) 0.0416(8) 0.0598(10) 0.0045(8) -0.0003(8) -0.0025(7) N10 0.0521(7) 0.0399(7) 0.0512(7) 0.0073(6) 0.0057(6) 0.0048(6) C11 0.0554(10) 0.0520(10) 0.0699(11) 0.0101(7) 0.0126(8) 0.0056(8) C12 0.0955(15) 0.0615(11) 0.0651(12) 0.0157(10) 0.0249(11) 0.0033(9) O13 0.1096(12) 0.0743(9) 0.0619(8) 0.0147(8) 0.0293(8) 0.0159(7) C14 0.0879(14) 0.0716(13) 0.0623(11) 0.0130(11) 0.0095(10) 0.0218(10) C15 0.0703(11) 0.0467(9) 0.0668(11) 0.0127(8) 0.0101(9) 0.0127(8) C16 0.0676(12) 0.0662(12) 0.0662(11) -0.0111(9) 0.0026(9) 0.0111(9) O17 0.0930(12) 0.0800(10) 0.1173(13) -0.0218(9) 0.0007(10) 0.0409(10) loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_group _atom_site_type_symbol C1 0.2447(3) 0.55635(10) 0.20868(9) 0.0442(4) Uani d . 1 . C C2 0.4111(3) 0.62699(10) 0.22080(10) 0.0465(4) Uani d . 1 . C C3 0.5867(3) 0.62316(12) 0.28910(11) 0.0532(4) Uani d . 1 . C H3A 0.6999(3) 0.66908(12) 0.29643(11) 0.064 Uiso calc R 1 . H C4 0.6014(3) 0.55345(12) 0.34743(10) 0.0551(4) Uani d . 1 . C C5 0.4348(3) 0.48554(12) 0.33454(11) 0.0546(4) Uani d . 1 . C H5A 0.4414(3) 0.43828(12) 0.37264(11) 0.065 Uiso calc R 1 . H C6 0.2559(3) 0.48564(11) 0.26583(10) 0.0487(4) Uani d . 1 . C O7 0.0739(2) 0.55552(9) 0.14110(8) 0.0575(3) Uani d . 1 . O C8 0.7918(4) 0.5526(2) 0.42251(13) 0.0777(6) Uani d . 1 . C H8A 0.8914(4) 0.6049(2) 0.42119(13) 0.117 Uiso calc R 1 . H H8B 0.8993(4) 0.5026(2) 0.41757(13) 0.117 Uiso calc R 1 . H H8C 0.7060(4) 0.5498(2) 0.47654(13) 0.117 Uiso calc R 1 . H C9 0.3906(4) 0.70645(11) 0.16330(12) 0.0576(4) Uani d . 1 . C H9A 0.2566(4) 0.74366(11) 0.18331(12) 0.069 Uiso calc R 1 . H H9B 0.5466(4) 0.73923(11) 0.16801(12) 0.069 Uiso calc R 1 . H N10 0.3389(2) 0.68306(8) 0.07112(8) 0.0476(3) Uani d . 1 . N C11 0.5541(3) 0.63968(12) 0.03305(12) 0.0589(5) Uani d . 1 . C H11A 0.5971(3) 0.58762(12) 0.06635(12) 0.071 Uiso calc R 1 . H H11B 0.6985(3) 0.67846(12) 0.03519(12) 0.071 Uiso calc R 1 . H C12 0.4911(5) 0.61535(14) -0.05958(13) 0.0736(6) Uani d . 1 . C H12A 0.6339(5) 0.58595(14) -0.08424(13) 0.088 Uiso calc R 1 . H H12B 0.3502(5) 0.57508(14) -0.06118(13) 0.088 Uiso calc R 1 . H O13 0.4285(3) 0.69024(10) -0.11065(9) 0.0814(5) Uani d . 1 . O C14 0.2227(4) 0.73414(15) -0.07489(13) 0.0737(6) Uani d . 1 . C H14A 0.0762(4) 0.69641(15) -0.07815(13) 0.088 Uiso calc R 1 . H H14B 0.1849(4) 0.78596(15) -0.10924(13) 0.088 Uiso calc R 1 . H C15 0.2739(4) 0.76016(11) 0.01821(12) 0.0611(5) Uani d . 1 . C H15A 0.4116(4) 0.80171(11) 0.02139(12) 0.073 Uiso calc R 1 . H H15B 0.1260(4) 0.78815(11) 0.04095(12) 0.073 Uiso calc R 1 . H C16 0.0799(4) 0.41244(14) 0.25634(13) 0.0666(5) Uani d . 1 . C H16A -0.0394(4) 0.41415(14) 0.21066(13) 0.080 Uiso calc R 1 . H O17 0.0807(3) 0.34995(11) 0.30445(13) 0.0968(6) Uani d . 1 . O H7 0.117(5) 0.6036(18) 0.1096(17) 0.100(8) Uiso d . 1 . H loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag O7 C1 C6 119.20(14) ? O7 C1 C2 120.75(14) ? C6 C1 C2 120.05(14) ? C3 C2 C1 118.33(15) ? C3 C2 C9 120.9(2) ? C1 C2 C9 120.75(14) ? C2 C3 C4 122.8(2) ? C2 C3 H3A 118.60(10) ? C4 C3 H3A 118.60(10) ? C5 C4 C3 117.65(15) ? C5 C4 C8 121.1(2) ? C3 C4 C8 121.3(2) ? C4 C5 C6 121.8(2) ? C4 C5 H5A 119.09(10) ? C6 C5 H5A 119.09(10) ? C1 C6 C5 119.3(2) ? C1 C6 C16 121.2(2) ? C5 C6 C16 119.5(2) ? C1 O7 H7 102.9(16) ? C4 C8 H8A 109.47(13) ? C4 C8 H8B 109.47(12) ? H8A C8 H8B 109.5 ? C4 C8 H8C 109.47(11) ? H8A C8 H8C 109.5 ? H8B C8 H8C 109.5 ? N10 C9 C2 111.91(13) yes N10 C9 H9A 109.23(9) ? C2 C9 H9A 109.23(9) ? N10 C9 H9B 109.23(9) ? C2 C9 H9B 109.23(9) ? H9A C9 H9B 107.9 ? C11 N10 C15 108.55(13) yes C11 N10 C9 111.65(14) yes C15 N10 C9 111.60(13) yes N10 C11 C12 109.8(2) yes N10 C11 H11A 109.71(9) ? C12 C11 H11A 109.71(11) ? N10 C11 H11B 109.71(9) ? C12 C11 H11B 109.71(12) ? H11A C11 H11B 108.2 ? O13 C12 C11 111.3(2) yes O13 C12 H12A 109.36(10) ? C11 C12 H12A 109.36(11) ? O13 C12 H12B 109.36(12) ? C11 C12 H12B 109.36(12) ? H12A C12 H12B 108.0 ? C14 O13 C12 109.91(14) yes O13 C14 C15 112.2(2) yes O13 C14 H14A 109.16(12) ? C15 C14 H14A 109.16(12) ? O13 C14 H14B 109.16(10) ? C15 C14 H14B 109.16(10) ? H14A C14 H14B 107.9 ? N10 C15 C14 110.21(15) yes N10 C15 H15A 109.62(10) ? C14 C15 H15A 109.62(12) ? N10 C15 H15B 109.62(9) ? C14 C15 H15B 109.62(11) ? H15A C15 H15B 108.1 ? O17 C16 C6 123.7(2) yes O17 C16 H16A 118.13(13) ? C6 C16 H16A 118.13(10) ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag C1 O7 . 1.356(2) yes C1 C6 . 1.393(2) ? C1 C2 . 1.406(2) ? C2 C3 . 1.382(2) ? C2 C9 . 1.504(2) ? C3 C4 . 1.393(2) ? C3 H3A . 0.93 ? C4 C5 . 1.376(3) ? C4 C8 . 1.509(2) ? C5 C6 . 1.397(2) ? C5 H5A . 0.93 ? C6 C16 . 1.464(3) ? O7 H7 . 0.91(3) ? C8 H8A . 0.96 ? C8 H8B . 0.96 ? C8 H8C . 0.96 ? C9 N10 . 1.476(2) ? C9 H9A . 0.97 ? C9 H9B . 0.97 ? N10 C11 . 1.461(2) yes N10 C15 . 1.468(2) yes C11 C12 . 1.496(3) yes C11 H11A . 0.97 ? C11 H11B . 0.97 ? C12 O13 . 1.422(2) yes C12 H12A . 0.97 ? C12 H12B . 0.97 ? O13 C14 . 1.410(2) yes C14 C15 . 1.499(3) yes C14 H14A . 0.97 ? C14 H14B . 0.97 ? C15 H15A . 0.97 ? C15 H15B . 0.97 ? C16 O17 . 1.208(2) yes C16 H16A . 0.93 ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag O7 H7 N10 1_555 0.91(3) 1.81(3) 2.655(2) 153(2) yes C9 H9A O17 2_555 0.97(2) 2.43(3) 3.381(3) 165(2) yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag O7 C1 C2 C3 -177.95(14) ? C6 C1 C2 C3 1.3(2) ? O7 C1 C2 C9 4.7(2) ? C6 C1 C2 C9 -175.98(14) ? C1 C2 C3 C4 -1.6(2) ? C9 C2 C3 C4 175.7(2) ? C2 C3 C4 C5 1.0(2) ? C2 C3 C4 C8 -178.5(2) ? C3 C4 C5 C6 -0.1(2) ? C8 C4 C5 C6 179.4(2) ? O7 C1 C6 C5 178.81(14) ? C2 C1 C6 C5 -0.5(2) ? O7 C1 C6 C16 -2.6(2) ? C2 C1 C6 C16 178.1(2) ? C4 C5 C6 C1 -0.1(2) ? C4 C5 C6 C16 -178.7(2) ? C3 C2 C9 N10 141.7(2) ? C1 C2 C9 N10 -41.1(2) ? C2 C9 N10 C11 -68.7(2) ? C2 C9 N10 C15 169.64(15) ? C15 N10 C11 C12 -57.9(2) yes C9 N10 C11 C12 178.67(15) ? N10 C11 C12 O13 59.7(2) yes C11 C12 O13 C14 -58.4(2) yes C12 O13 C14 C15 57.2(2) yes C11 N10 C15 C14 56.5(2) yes C9 N10 C15 C14 180.0(2) ? O13 C14 C15 N10 -57.2(2) yes C1 C6 C16 O17 -179.5(2) ? C5 C6 C16 O17 -0.9(3) ?