#------------------------------------------------------------------------------ #$Date: 2012-02-03 19:16:24 +0200 (Fri, 03 Feb 2012) $ #$Revision: 32112 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/00/82/2008253.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2008253 loop_ _publ_author_name 'Brunel, Serge' 'Maurel, Jean Louis' 'Ribet, Jean Paul' 'Monconduit, Laure' 'Tillard, Monique' 'Belin, Claude' _publ_contact_author ; C. Belin Laboratoire des Agregats Moleculaires et Materiaux Inorganiques ESA 5072 CC15 Universite de Montpellier II Sciences et Techniques du Languedoc 2 Place Eugene Bataillon 34095 Montpellier Cedex 5 France ; _publ_section_title ; Absolute configuration of 2-(1,4-benzodioxan-2-yl)imidazolinium bromide ; _journal_issue 3 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 441 _journal_page_last 443 _journal_volume 55 _journal_year 1999 _chemical_formula_moiety 'C11 H13 N2 O2 , Br' _chemical_formula_sum 'C11 H13 Br N2 O2' _chemical_formula_weight 285.14 _chemical_name_common 'Idazoxan hydrobromide' _chemical_name_systematic ; 2-(1,4-benzodioxan-2-yl)imidazolinium bromide ; _space_group_IT_number 19 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'P 2ac 2ab' _symmetry_space_group_name_H-M 'P 21 21 21' _audit_creation_method SHELXL97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 8.817(2) _cell_length_b 9.872(2) _cell_length_c 13.672(3) _cell_measurement_reflns_used 25 _cell_measurement_temperature 295(2) _cell_measurement_theta_max 22.3 _cell_measurement_theta_min 10.2 _cell_volume 1190.0(4) _computing_cell_refinement 'CAD-4 Software' _computing_data_collection 'CAD-4 Software (Enraf-Nonius, 1989)' _computing_data_reduction 'local program' _computing_molecular_graphics 'ORTEPII (Johnson, 1976)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS86 (Sheldrick, 1985)' _diffrn_ambient_temperature 295(2) _diffrn_measured_fraction_theta_full 1.000 _diffrn_measured_fraction_theta_max 1.000 _diffrn_measurement_device_type 'Nonius CAD-4' _diffrn_measurement_method \w/2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.021 _diffrn_reflns_av_sigmaI/netI 0.083 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min -10 _diffrn_reflns_limit_k_max 12 _diffrn_reflns_limit_k_min -12 _diffrn_reflns_limit_l_max 16 _diffrn_reflns_limit_l_min -16 _diffrn_reflns_number 2716 _diffrn_reflns_theta_full 25.97 _diffrn_reflns_theta_max 25.97 _diffrn_reflns_theta_min 2.54 _diffrn_standards_decay_% <2 _diffrn_standards_interval_count 100 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 3.442 _exptl_absorpt_correction_T_max 0.42 _exptl_absorpt_correction_T_min 0.31 _exptl_absorpt_correction_type 'numerical (SHELX76; Sheldrick, 1976)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.592 _exptl_crystal_density_meas 'not measured' _exptl_crystal_density_method 'not measured' _exptl_crystal_description 'flat rod' _exptl_crystal_F_000 576 _exptl_crystal_size_max 0.40 _exptl_crystal_size_mid 0.30 _exptl_crystal_size_min 0.25 _refine_diff_density_max 0.32 _refine_diff_density_min -0.40 _refine_ls_abs_structure_details 'Flack (1983)' _refine_ls_abs_structure_Flack -0.02(2) _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 0.959 _refine_ls_hydrogen_treatment 'H atoms: see below' _refine_ls_matrix_type full _refine_ls_number_parameters 153 _refine_ls_number_reflns 2333 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 0.959 _refine_ls_R_factor_all 0.080 _refine_ls_R_factor_gt 0.036 _refine_ls_shift/su_max <0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_scheme 'calc w = 1/[\s^2^(Fo^2^)+(0.0386P)^2^] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_wR_factor_ref 0.089 _reflns_number_gt 1576 _reflns_number_total 2333 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file fr1149.cif _[local]_cod_data_source_block idazoxan _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius ; _cod_database_code 2008253 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' 'x+1/2, -y+1/2, -z' '-x, y+1/2, -z+1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol Br 0.11126(6) 0.77585(5) 0.25685(4) 0.04776(16) Uani d . 1 . . Br O1 0.4041(4) 0.7674(3) 0.0178(2) 0.0444(8) Uani d . 1 . . O C2 0.5018(5) 0.7885(5) 0.0965(3) 0.0422(12) Uani d . 1 . . C C3 0.5049(6) 0.6891(5) 0.1673(4) 0.0516(14) Uani d . 1 . . C H3 0.4451 0.6120 0.1614 0.062 Uiso calc R 1 . . H C4 0.5988(6) 0.7064(6) 0.2472(4) 0.0648(15) Uani d . 1 . . C H4 0.6039 0.6393 0.2949 0.078 Uiso calc R 1 . . H C5 0.6856(6) 0.8228(6) 0.2573(5) 0.0605(14) Uani d . 1 . . C H5 0.7485 0.8334 0.3113 0.073 Uiso calc R 1 . . H C6 0.6784(6) 0.9225(6) 0.1870(4) 0.0524(14) Uani d . 1 . . C H6 0.7348 1.0015 0.1939 0.063 Uiso calc R 1 . . H C7 0.5871(6) 0.9042(5) 0.1068(3) 0.0376(11) Uani d . 1 . . C O8 0.5826(5) 1.0063(3) 0.0373(3) 0.0503(10) Uani d . 1 . . O C9 0.5369(6) 0.9535(6) -0.0555(4) 0.0475(14) Uani d . 1 . . C H9A 0.6146 0.8928 -0.0799 0.057 Uiso calc R 1 . . H H9B 0.5260 1.0274 -0.1017 0.057 Uiso calc R 1 . . H C10 0.3910(7) 0.8792(5) -0.0478(3) 0.0414(11) Uani d . 1 . . C H10 0.3661 0.8434 -0.1127 0.050 Uiso calc R 1 . . H C11 0.2624(6) 0.9690(5) -0.0156(3) 0.0383(13) Uani d . 1 . . C N12 0.1792(6) 0.9461(5) 0.0603(3) 0.0476(12) Uani d . 1 . . N C13 0.0576(7) 1.0431(6) 0.0679(5) 0.0626(18) Uani d . 1 . . C H13A 0.0582 1.0875 0.1312 0.075 Uiso calc R 1 . . H H13B -0.0402 1.0003 0.0580 0.075 Uiso calc R 1 . . H C14 0.0927(8) 1.1430(7) -0.0137(5) 0.0685(17) Uani d . 1 . . C H14A 0.0069 1.1538 -0.0574 0.082 Uiso calc R 1 . . H H14B 0.1215 1.2308 0.0122 0.082 Uiso calc R 1 . . H N15 0.2215(7) 1.0762(5) -0.0634(4) 0.0582(14) Uani d . 1 . . N H12 0.190(7) 0.877(6) 0.096(4) 0.059(19) Uiso d . 1 . . H H15 0.247(7) 1.103(7) -0.116(5) 0.08(3) Uiso d . 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Br 0.0595(3) 0.0524(3) 0.0313(2) -0.0080(3) 0.0004(3) -0.0006(3) O1 0.054(2) 0.0316(16) 0.0474(17) -0.002(2) -0.0045(17) -0.0019(15) C2 0.042(3) 0.038(3) 0.047(3) 0.006(3) 0.009(2) -0.003(2) C3 0.049(3) 0.041(3) 0.065(4) 0.003(3) 0.007(3) 0.010(3) C4 0.055(3) 0.083(4) 0.057(3) 0.007(3) -0.001(4) 0.034(4) C5 0.046(3) 0.092(4) 0.044(3) 0.005(3) -0.002(3) 0.006(4) C6 0.045(3) 0.059(3) 0.054(3) -0.008(3) 0.003(3) -0.013(3) C7 0.035(3) 0.037(3) 0.041(3) 0.001(2) 0.007(2) -0.005(2) O8 0.062(3) 0.039(2) 0.050(2) -0.0128(19) 0.003(2) -0.0019(16) C9 0.052(3) 0.047(3) 0.044(3) 0.005(3) 0.011(3) -0.003(3) C10 0.050(3) 0.040(3) 0.034(2) 0.000(3) 0.002(3) -0.007(2) C11 0.048(3) 0.034(3) 0.033(3) -0.009(3) 0.001(3) -0.005(2) N12 0.059(3) 0.041(3) 0.042(3) 0.009(3) 0.016(2) 0.005(2) C13 0.069(4) 0.058(4) 0.060(4) 0.015(4) 0.021(3) 0.002(3) C14 0.079(5) 0.051(4) 0.076(4) 0.017(4) 0.010(4) 0.006(3) N15 0.075(4) 0.048(3) 0.051(3) 0.004(3) 0.014(3) 0.017(3) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag O1 C2 . 1.393(6) y O1 C10 . 1.428(5) y C2 C7 . 1.374(7) y C2 C3 . 1.379(7) y C3 C4 . 1.382(7) y C3 H3 . 0.9300 n C4 C5 . 1.387(8) y C4 H4 . 0.9300 n C5 C6 . 1.377(8) y C5 H5 . 0.9300 n C6 C7 . 1.373(7) y C6 H6 . 0.9300 n C7 O8 . 1.387(6) y O8 C9 . 1.429(7) y C9 C10 . 1.484(7) y C9 H9A . 0.9700 n C9 H9B . 0.9700 n C10 C11 . 1.506(7) y C10 H10 . 0.9800 n C11 N12 . 1.290(6) y C11 N15 . 1.294(7) y N12 C13 . 1.442(7) y N12 H12 . 0.84(6) n C13 C14 . 1.520(8) y C13 H13A . 0.9700 n C13 H13B . 0.9700 n C14 N15 . 1.478(8) y C14 H14A . 0.9700 n C14 H14B . 0.9700 n N15 H15 . 0.79(6) n loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source Br Br -0.2901 2.4595 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C2 O1 C10 114.8(4) no C3 C2 C7 120.6(5) no C3 C2 O1 116.5(5) no C7 C2 O1 122.7(5) no C2 C3 C4 118.4(6) no C5 C4 C3 121.1(6) no C4 C5 C6 120.0(6) no C7 C6 C5 119.1(6) no C6 C7 C2 120.7(5) no C6 C7 O8 118.0(5) no C2 C7 O8 121.3(5) no C7 O8 C9 110.5(4) no O8 C9 C10 111.2(5) no O1 C10 C9 110.7(5) no O1 C10 C11 109.1(4) no C9 C10 C11 112.8(5) no N12 C11 N15 112.8(5) no N12 C11 C10 124.4(5) no N15 C11 C10 122.8(5) no C11 N12 C13 111.9(5) no N12 C13 C14 102.7(5) no N15 C14 C13 101.8(5) no C11 N15 C14 110.3(5) no loop_ _geom_contact_atom_site_label_1 _geom_contact_atom_site_label_2 _geom_contact_distance _geom_contact_site_symmetry_2 _geom_contact_publ_flag Br N15 3.217(5) 2_575 y Br N12 3.226(5) . y Br C9 3.625(6) 3_465 n Br C13 3.638(6) 4_545 n Br C13 3.723(6) . n Br C3 3.779(5) . n Br C10 3.779(5) 3_465 n Br C5 3.782(5) 1_455 n Br C9 3.928(6) 2_575 n Br C6 4.024(6) 4_645 n Br C2 4.084(5) . n Br C11 4.155(5) 2_575 n O1 N12 2.717(6) . n O1 N12 3.386(6) 3_565 n O1 N15 3.622(6) . n O1 Br 4.198(3) 3_565 n O1 N15 4.440(7) 3_565 n O1 Br 5.752(4) 2_574 n O1 N15 6.033(6) 2_575 n O1 Br 6.443(3) 2_564 n O1 N12 6.814(6) 3_465 n C2 N12 3.279(7) . n C2 N12 3.522(7) 3_565 n C2 N15 4.113(7) 3_565 n C2 N15 4.353(7) . n C2 Br 4.967(5) 3_565 n C2 N15 5.224(7) 2_575 n C2 Br 5.805(5) 1_655 n C2 N12 6.192(7) 1_655 n C3 N15 3.539(8) 3_565 n C3 N12 3.718(7) 3_565 n C3 N12 4.102(7) . n C3 N15 4.787(8) 2_575 n C3 N12 5.233(7) 4_645 n C3 Br 5.401(5) 4_645 n C3 N15 5.549(7) . n C3 Br 5.551(6) 1_655 n C3 Br 5.884(6) 3_565 n C4 N15 3.908(8) 3_565 n C4 N12 4.167(7) 4_645 n C4 N15 4.392(8) 2_575 n C4 N12 4.522(8) 3_565 n C4 Br 4.572(6) 1_655 n C4 N15 4.780(8) 4_645 n C4 Br 4.960(5) 4_645 n C4 N12 5.081(7) . n C4 N12 6.008(8) 2_575 n C5 Br 3.782(5) 1_655 n C5 N15 4.460(8) 2_575 n C5 N12 4.634(8) 4_645 n C5 N15 4.758(8) 3_565 n C5 Br 4.822(6) 4_655 n C5 N15 4.911(9) 4_645 n C5 N12 5.089(8) 3_565 n C5 N12 5.261(8) 1_655 n C5 N12 5.354(8) . n C6 Br 4.024(6) 4_655 n C6 Br 4.192(6) 1_655 n C6 N12 4.736(7) . n C6 N12 4.749(7) 1_655 n C6 N15 4.907(8) 2_575 n C6 N12 4.967(7) 3_565 n C6 N15 5.219(8) 3_565 n C6 N15 5.244(8) 3_575 n C6 N15 5.500(8) . n C7 N12 3.675(7) . n C7 N12 4.223(6) 3_565 n C7 N15 4.323(8) . n C7 Br 4.900(5) 4_655 n C7 N15 4.923(7) 3_565 n C7 Br 5.213(5) 1_655 n C7 N15 5.270(7) 2_575 n C7 N12 5.276(7) 1_655 n O8 N15 3.536(7) . n O8 N12 3.620(6) . n O8 N15 4.315(6) 3_575 n O8 Br 4.716(4) 2_574 n O8 Br 4.721(4) 4_655 n O8 N12 4.738(6) 3_565 n O8 Br 4.898(4) 3_565 n O8 N12 5.303(7) 1_655 n O8 N12 5.633(6) 3_575 n C9 C10 1.484(7) . y C9 N15 3.035(8) . n C9 N12 3.529(7) . n C9 Br 3.625(6) 3_565 n C9 Br 3.928(6) 2_574 n C9 N12 4.140(8) 3_565 n C9 N15 5.182(8) 3_575 n C9 N12 5.676(7) 2_574 n C9 N15 5.712(8) 3_565 n C9 N12 5.881(8) 1_655 n C10 N15 2.461(7) . n C10 N12 2.471(7) . n C10 Br 3.779(5) 3_565 n C10 N12 4.099(7) 3_565 n C10 Br 4.328(5) 2_574 n C10 N15 5.569(7) 3_565 n C10 N12 5.663(7) 2_574 n C10 N15 6.301(7) 3_575 n C11 Br 4.155(5) 2_574 n C11 Br 5.118(5) 3_565 n C11 N12 5.539(7) 3_565 n C11 Br 5.704(5) 4 n C11 N12 5.882(7) 2_574 n C11 N15 6.141(7) 3_575 n C11 N15 6.200(7) 2_575 n C11 N12 6.603(7) 3_465 n N12 C13 1.442(7) . y N12 N15 2.155(7) . n N12 C14 2.320(8) . n N12 O1 3.386(6) 3_465 n N12 C2 3.522(7) 3_465 n C13 N15 2.328(8) . n C13 Br 3.638(6) 4 n C13 N15 4.786(8) 3_475 n C13 Br 5.460(6) 2_574 n C13 N15 5.531(8) 2_575 n C13 N12 6.126(9) 3_465 n C13 N12 6.295(8) 3_475 n C13 Br 6.717(8) 3_465 n C13 N12 6.784(8) 4 n C14 Br 4.157(6) 4 n C14 Br 4.159(6) 2_574 n C14 N15 4.417(8) 3_475 n C14 N12 5.492(8) 3_475 n C14 N12 6.225(8) 2_574 n C14 N15 6.288(9) 3_575 n C14 N12 6.603(9) 3_575 n C14 N15 6.728(8) 2_575 n N15 Br 3.217(5) 2_574 n N15 C3 3.539(8) 3_465 n N15 C4 3.908(8) 3_465 n N15 C2 4.113(7) 3_465 n loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N12 H12 Br . 0.84(6) 2.52(5) 3.226(5) 142(5) y N15 H15 Br 2_574 0.79(6) 2.46(7) 3.217(5) 161(6) y