#------------------------------------------------------------------------------ #$Date: 2013-12-28 15:58:47 +0200 (Sat, 28 Dec 2013) $ #$Revision: 91933 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/00/86/2008652.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2008652 loop_ _publ_author_name E.M.Elssfah K.Chinnakali H.K.Fun I.W.Mathison E.K.Gan M.Zubaid T.W.Sam C.Y.Tan _publ_section_title ; 3,5-Dichloro-4-(imidazolidin-2-ylideneammonio)benzoate dihydrate ; _journal_issue 7 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 1115 _journal_page_last 1117 _journal_volume 55 _journal_year 1999 _chemical_formula_sum 'C10 H13 Cl2 N3 O4' _chemical_formula_weight 310.13 _chemical_name_systematic ; 2-(4-carboxyl-2,6-dichlorophenylimino)imidazolidine dihydrate ; _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _audit_creation_method SHELXL _cell_angle_alpha 88.788(7) _cell_angle_beta 73.155(8) _cell_angle_gamma 77.352(7) _cell_formula_units_Z 2 _cell_length_a 8.0857(9) _cell_length_b 8.5118(5) _cell_length_c 10.4161(7) _cell_measurement_reflns_used 38 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 12.513 _cell_measurement_theta_min 5.439 _cell_volume 668.78(10) _computing_cell_refinement XSCANS _computing_data_collection 'XSCANS (Siemens, 1994)' _computing_data_reduction XSCANS _computing_molecular_graphics SHELXTL _computing_publication_material ; SHELXTL and PARST (Nardelli, 1995) ; _computing_structure_refinement SHELXTL _computing_structure_solution 'SHELXTL (Sheldrick, 1997)' _diffrn_ambient_temperature 293(2) _diffrn_measurement_device 'Siemens P4 diffractometer' _diffrn_measurement_method '\q/2\q scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0184 _diffrn_reflns_av_sigmaI/netI 0.0410 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min -9 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 13 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 3721 _diffrn_reflns_theta_max 27.50 _diffrn_reflns_theta_min 2.04 _diffrn_standards_decay_% <3 _diffrn_standards_interval_count 97 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.499 _exptl_absorpt_correction_T_max 0.933 _exptl_absorpt_correction_T_min 0.734 _exptl_absorpt_correction_type 'empirical \y-scans (Siemens, 1994)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.540 _exptl_crystal_density_meas 'not measured' _exptl_crystal_description parallelepiped _exptl_crystal_F_000 320 _exptl_crystal_size_max 0.66 _exptl_crystal_size_mid 0.20 _exptl_crystal_size_min 0.14 _refine_diff_density_max 0.500 _refine_diff_density_min -0.486 _refine_ls_extinction_coef 0.029(5) _refine_ls_extinction_method 'SHELXTL (Sheldrick, 1997)' _refine_ls_goodness_of_fit_all 1.045 _refine_ls_goodness_of_fit_obs 1.162 _refine_ls_hydrogen_treatment refall _refine_ls_matrix_type full _refine_ls_number_parameters 225 _refine_ls_number_reflns 3073 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.045 _refine_ls_restrained_S_obs 1.162 _refine_ls_R_factor_all 0.0530 _refine_ls_R_factor_obs 0.0383 _refine_ls_shift/esd_max 0.000 _refine_ls_shift/esd_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_scheme 'calc w = 1/[\s^2^(Fo^2^)+(0.0604P)^2^+0.0078P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_wR_factor_all 0.1104 _refine_ls_wR_factor_obs 0.1049 _reflns_number_observed 2298 _reflns_number_total 3073 _reflns_observed_criterion I>2\s(I) _[local]_cod_data_source_file bk1445.cif _[local]_cod_data_source_block I _[local]_cod_chemical_formula_sum_orig 'C10 H9 Cl2 N3 O2 ,2(H2 O)' _cod_database_code 2008652 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_group _atom_site_type_symbol Cl1 0.57352(7) 0.70455(9) 0.45365(6) 0.0605(2) Uani d . 1 . Cl Cl2 0.03313(7) 0.59847(7) 0.28645(6) 0.0541(2) Uani d . 1 . Cl O1 -0.2454(2) 0.9546(2) 0.73295(14) 0.0415(3) Uani d . 1 . O O2 -0.0273(2) 0.9837(2) 0.81479(14) 0.0488(4) Uani d . 1 . O O3 -0.4730(3) 0.7484(2) 0.7953(2) 0.0675(6) Uani d . 1 . O O4 0.1826(2) 0.8027(2) 0.9594(2) 0.0448(4) Uani d . 1 . O N1 0.4158(2) 0.5739(2) 0.2632(2) 0.0370(4) Uani d . 1 . N N2 0.5246(2) 0.7933(2) 0.1626(2) 0.0390(4) Uani d . 1 . N N3 0.6864(2) 0.5515(2) 0.0926(2) 0.0413(4) Uani d . 1 . N C1 0.2925(2) 0.6628(2) 0.3784(2) 0.0302(4) Uani d . 1 . C C2 0.3487(2) 0.7318(2) 0.4744(2) 0.0354(4) Uani d . 1 . C C3 0.2288(2) 0.8183(2) 0.5871(2) 0.0346(4) Uani d . 1 . C C4 0.0486(2) 0.8368(2) 0.6070(2) 0.0287(4) Uani d . 1 . C C5 -0.0104(2) 0.7676(2) 0.5139(2) 0.0320(4) Uani d . 1 . C C6 0.1106(2) 0.6826(2) 0.4014(2) 0.0314(4) Uani d . 1 . C C7 0.5371(2) 0.6373(2) 0.1762(2) 0.0318(4) Uani d . 1 . C C8 0.6890(3) 0.8244(2) 0.0719(2) 0.0421(5) Uani d . 1 . C C9 0.7854(3) 0.6576(2) 0.0068(2) 0.0427(5) Uani d . 1 . C C10 -0.0853(2) 0.9325(2) 0.7287(2) 0.0317(4) Uani d . 1 . C H1O3 -0.411(4) 0.806(3) 0.773(3) 0.056(8) Uiso d . 1 . H H2O3 -0.568(5) 0.789(4) 0.853(3) 0.084(10) Uiso d . 1 . H H1O4 0.141(4) 0.859(4) 1.033(3) 0.077(9) Uiso d . 1 . H H2O4 0.128(4) 0.849(3) 0.912(3) 0.058(9) Uiso d . 1 . H H1N1 0.427(3) 0.483(3) 0.259(2) 0.042(6) Uiso d . 1 . H H1N2 0.425(3) 0.868(3) 0.206(2) 0.039(5) Uiso d . 1 . H H1N3 0.721(3) 0.449(3) 0.083(2) 0.048(6) Uiso d . 1 . H H3 0.271(3) 0.860(3) 0.645(2) 0.050(6) Uiso d . 1 . H H5 -0.128(3) 0.777(3) 0.527(2) 0.052(7) Uiso d . 1 . H H8A 0.662(3) 0.899(3) 0.008(2) 0.047(6) Uiso d . 1 . H H8B 0.752(4) 0.870(3) 0.123(3) 0.064(8) Uiso d . 1 . H H9A 0.789(4) 0.649(3) -0.089(3) 0.065(8) Uiso d . 1 . H H9B 0.907(4) 0.629(3) 0.008(2) 0.053(7) Uiso d . 1 . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Cl1 0.0212(2) 0.1018(5) 0.0524(3) -0.0065(3) -0.0056(2) -0.0133(3) Cl2 0.0423(3) 0.0714(4) 0.0478(3) -0.0155(3) -0.0075(2) -0.0273(3) O1 0.0259(7) 0.0379(7) 0.0485(8) -0.0002(5) 0.0036(6) -0.0092(6) O2 0.0462(8) 0.0592(9) 0.0335(7) -0.0001(7) -0.0072(6) -0.0174(6) O3 0.0480(10) 0.0437(9) 0.0940(15) -0.0164(8) 0.0115(10) -0.0250(9) O4 0.0445(8) 0.0403(8) 0.0415(8) -0.0004(6) -0.0061(7) -0.0099(7) N1 0.0338(8) 0.0283(8) 0.0369(9) -0.0045(7) 0.0070(7) -0.0080(6) N2 0.0309(8) 0.0318(8) 0.0400(9) -0.0003(6) 0.0071(7) -0.0060(6) N3 0.0345(9) 0.0289(8) 0.0440(10) -0.0015(7) 0.0102(7) -0.0061(7) C1 0.0256(8) 0.0296(8) 0.0273(8) -0.0036(7) 0.0030(7) -0.0027(6) C2 0.0205(8) 0.0457(10) 0.0343(9) -0.0032(7) -0.0022(7) -0.0030(8) C3 0.0269(9) 0.0429(10) 0.0316(9) -0.0058(7) -0.0057(7) -0.0056(8) C4 0.0259(8) 0.0276(8) 0.0273(8) -0.0034(6) -0.0013(7) -0.0020(6) C5 0.0216(8) 0.0358(9) 0.0340(9) -0.0047(7) -0.0018(7) -0.0061(7) C6 0.0292(8) 0.0327(8) 0.0295(8) -0.0081(7) -0.0032(7) -0.0053(7) C7 0.0261(8) 0.0324(9) 0.0299(8) -0.0021(7) -0.0006(7) -0.0062(7) C8 0.0384(11) 0.0361(10) 0.0394(11) -0.0070(8) 0.0068(9) -0.0029(8) C9 0.0320(10) 0.0384(10) 0.0425(11) -0.0021(8) 0.0085(9) -0.0038(8) C10 0.0304(9) 0.0277(8) 0.0289(9) -0.0025(7) 0.0011(7) -0.0024(6) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Cl1 C2 . 1.731(2) ? Cl2 C6 . 1.734(2) ? O1 C10 . 1.255(2) yes O2 C10 . 1.250(2) yes O3 H1O3 . 0.76(3) ? O3 H2O3 . 0.83(4) ? O4 H1O4 . 0.85(3) ? O4 H2O4 . 0.80(3) ? N1 C7 . 1.330(2) yes N1 C1 . 1.422(2) yes N1 H1N1 . 0.76(2) ? N2 C7 . 1.317(2) yes N2 C8 . 1.464(2) yes N2 H1N2 . 0.91(2) ? N3 C7 . 1.334(2) yes N3 C9 . 1.456(3) yes N3 H1N3 . 0.86(2) ? C1 C6 . 1.392(2) ? C1 C2 . 1.398(3) ? C2 C3 . 1.387(2) ? C3 C4 . 1.384(2) ? C3 H3 . 0.88(2) ? C4 C5 . 1.390(3) ? C4 C10 . 1.518(2) ? C5 C6 . 1.384(2) ? C5 H5 . 0.91(3) ? C8 C9 . 1.528(3) ? C8 H8A . 0.95(2) ? C8 H8B . 0.97(3) ? C9 H9A . 0.99(3) ? C9 H9B . 0.96(3) ? loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle H1O3 O3 H2O3 114.(3) H1O4 O4 H2O4 104.(3) C7 N1 C1 122.3(2) C7 N1 H1N1 117.6(17) C1 N1 H1N1 118.7(17) C7 N2 C8 110.6(2) C7 N2 H1N2 122.3(13) C8 N2 H1N2 127.1(13) C7 N3 C9 110.4(2) C7 N3 H1N3 127.6(16) C9 N3 H1N3 121.7(16) C6 C1 C2 117.21(15) C6 C1 N1 121.3(2) C2 C1 N1 121.5(2) C3 C2 C1 121.7(2) C3 C2 Cl1 119.27(15) C1 C2 Cl1 119.03(13) C4 C3 C2 119.9(2) C4 C3 H3 121.9(16) C2 C3 H3 118.2(16) C3 C4 C5 119.5(2) C3 C4 C10 120.9(2) C5 C4 C10 119.6(2) C6 C5 C4 120.0(2) C6 C5 H5 119.8(15) C4 C5 H5 120.1(15) C5 C6 C1 121.7(2) C5 C6 Cl2 118.99(14) C1 C6 Cl2 119.30(13) N2 C7 N1 124.0(2) N2 C7 N3 111.6(2) N1 C7 N3 124.4(2) N2 C8 C9 102.5(2) N2 C8 H8A 109.8(15) C9 C8 H8A 111.9(14) N2 C8 H8B 109.5(16) C9 C8 H8B 114.2(16) H8A C8 H8B 109.(2) N3 C9 C8 102.8(2) N3 C9 H9A 113.7(15) C8 C9 H9A 112.7(14) N3 C9 H9B 109.1(14) C8 C9 H9B 112.8(15) H9A C9 H9B 106.(2) O2 C10 O1 125.7(2) O2 C10 C4 117.7(2) O1 C10 C4 116.5(2) loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag O3 H1O3 O1 1_555 0.76(3) 1.99(3) 2.750(3) 174(3) yes O4 H2O4 O2 1_555 0.80(3) 1.99(3) 2.786(2) 172(3) yes O3 H2O3 O4 1_455 0.83(4) 1.98(4) 2.757(3) 155(3) yes O4 H1O4 O2 2_577 0.85(3) 1.96(3) 2.808(2) 170(3) yes N1 H1N1 O3 2_566 0.76(2) 1.99(2) 2.732(2) 167(2) yes N2 H1N2 O1 2_576 0.91(2) 1.83(2) 2.727(2) 168(2) yes N3 H1N3 O4 2_666 0.85(2) 2.12(2) 2.974(2) 175(2) yes C9 H9A Cl2 2_665 0.99(3) 2.81(3) 3.538(2) 131(2) yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C7 N1 C1 C6 123.5(2) C7 N1 C1 C2 -57.5(3) C6 C1 C2 C3 -0.9(3) N1 C1 C2 C3 -179.9(2) C6 C1 C2 Cl1 177.74(14) N1 C1 C2 Cl1 -1.3(2) C1 C2 C3 C4 0.6(3) Cl1 C2 C3 C4 -177.99(15) C2 C3 C4 C5 0.2(3) C2 C3 C4 C10 -179.3(2) C3 C4 C5 C6 -0.7(3) C10 C4 C5 C6 178.8(2) C4 C5 C6 C1 0.5(3) C4 C5 C6 Cl2 -179.68(14) C2 C1 C6 C5 0.3(3) N1 C1 C6 C5 179.4(2) C2 C1 C6 Cl2 -179.54(13) N1 C1 C6 Cl2 -0.5(2) C8 N2 C7 N1 172.6(2) C8 N2 C7 N3 -7.2(2) C1 N1 C7 N2 -21.3(3) C1 N1 C7 N3 158.4(2) C9 N3 C7 N2 -2.9(3) C9 N3 C7 N1 177.3(2) C7 N2 C8 C9 13.5(2) C7 N3 C9 C8 11.0(2) N2 C8 C9 N3 -14.0(2) C3 C4 C10 O2 -5.1(3) C5 C4 C10 O2 175.3(2) C3 C4 C10 O1 174.1(2) C5 C4 C10 O1 -5.5(2) _journal_paper_doi 10.1107/S0108270199003832