#------------------------------------------------------------------------------ #$Date: 2011-09-10 06:16:28 +0300 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/2012163.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2012163 loop_ _publ_author_name 'Farrell, Dorcas M. M.' 'Ferguson, George' 'Lough, Alan J.' 'Glidewell, Christopher' _publ_section_title ; Hydrogen-bonded bilayers in piperazinium(2+) bis(mandelate) bis(methanol) solvate ; _journal_issue 8 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 955 _journal_page_last 957 _journal_volume 57 _journal_year 2001 _chemical_formula_moiety 'C4 H12 N2 2+ , 2C8 H7 O3 - , 2C H4 O' _chemical_formula_sum 'C22 H34 N2 O8' _chemical_formula_weight 454.51 _chemical_name_systematic ; Piperazinium(2+) bis(mandelate) bis(methanol) solvate ; _space_group_IT_number 61 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall '-P 2ac 2ab' _symmetry_space_group_name_H-M 'P b c a' _cell_angle_alpha 90 _cell_angle_beta 90 _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 7.7360(2) _cell_length_b 10.2394(4) _cell_length_c 29.7822(11) _cell_measurement_reflns_used 2290 _cell_measurement_temperature 150(2) _cell_measurement_theta_max 25.02 _cell_measurement_theta_min 2.74 _cell_volume 2359.11(14) _computing_cell_refinement 'DENZO-SMN (Otwinowski & Minor, 1997)' _computing_data_collection 'COLLECT (Nonius, 1997-2000)' _computing_data_reduction DENZO-SMN _computing_molecular_graphics 'PLATON (Spek, 2001)' _computing_publication_material 'SHELXL97 and PRPKAPPA (Ferguson, 1999)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 150(2) _diffrn_measured_fraction_theta_full .999 _diffrn_measured_fraction_theta_max .999 _diffrn_measurement_device_type 'Nonius Kappa-CCD' _diffrn_measurement_method '\f scans, and \w scans with \k offsets' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed X-ray tube' _diffrn_radiation_type 'Mo K\a' _diffrn_radiation_wavelength .71073 _diffrn_reflns_av_R_equivalents .089 _diffrn_reflns_av_sigmaI/netI .094 _diffrn_reflns_limit_h_max 9 _diffrn_reflns_limit_h_min -9 _diffrn_reflns_limit_k_max 12 _diffrn_reflns_limit_k_min -12 _diffrn_reflns_limit_l_max 35 _diffrn_reflns_limit_l_min -35 _diffrn_reflns_number 11737 _diffrn_reflns_theta_full 25.02 _diffrn_reflns_theta_max 25.02 _diffrn_reflns_theta_min 2.74 _diffrn_standards_decay_% negligible _exptl_absorpt_coefficient_mu .097 _exptl_absorpt_correction_T_max .988 _exptl_absorpt_correction_T_min .973 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(DENZO-SMN; Otwinowski & Minor, 1997)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.280 _exptl_crystal_density_method 'not measured' _exptl_crystal_description needle _exptl_crystal_F_000 976 _exptl_crystal_size_max .28 _exptl_crystal_size_mid .16 _exptl_crystal_size_min .12 _refine_diff_density_max .19 _refine_diff_density_min -.22 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref .909 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 163 _refine_ls_number_reflns 2074 _refine_ls_number_restraints 6 _refine_ls_restrained_S_all .909 _refine_ls_R_factor_all .127 _refine_ls_R_factor_gt .048 _refine_ls_shift/su_max .001 _refine_ls_shift/su_mean .000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(Fo^2^)+(0.0694P)^2^] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref .133 _reflns_number_gt 1077 _reflns_number_total 2074 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file sk1483.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M 'Pb c a' _cod_database_code 2012163 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' 'x+1/2, -y+1/2, -z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, y, -z-1/2' '-x-1/2, y-1/2, z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol O1 .8595(2) .46050(17) .59125(5) .0443(5) Uani d . 1 . . O O2 .8795(3) .28474(17) .54799(6) .0587(6) Uani d . 1 . . O O3 1.1657(3) .20571(17) .58472(5) .0471(6) Uani d . 1 . . O H3 1.2532 .1815 .5992 .071 Uiso calc R 1 . . H C11 1.0100(3) .2564(2) .65444(7) .0352(7) Uani d . 1 . . C C12 .9594(4) .1274(3) .66031(8) .0427(7) Uani d . 1 . . C H12 .9713 .0672 .6362 .051 Uiso calc R 1 . . H C13 .8919(4) .0858(3) .70081(9) .0495(8) Uani d . 1 . . C H13 .8595 -.0031 .7045 .059 Uiso calc R 1 . . H C14 .8713(4) .1718(3) .73593(9) .0481(8) Uani d . 1 . . C H14 .8242 .1430 .7637 .058 Uiso calc R 1 . . H C15 .9201(4) .3004(3) .73029(8) .0467(8) Uani d . 1 . . C H15 .9057 .3606 .7543 .056 Uiso calc R 1 . . H C16 .9894(4) .3423(3) .69026(8) .0423(7) Uani d . 1 . . C H16 1.0237 .4309 .6870 .051 Uiso calc R 1 . . H C17 1.0770(3) .3043(2) .60933(7) .0362(7) Uani d . 1 . . C H17 1.1586 .3784 .6148 .043 Uiso calc R 1 . . H C18 .9281(4) .3538(3) .58021(8) .0366(7) Uani d . 1 . . C N1A .6078(5) .5241(4) .53836(11) .0366(11) Uani d PD .50 . 1 N H1A .5691 .6049 .5474 .044 Uiso calc PR .50 . 1 H H2A .6952 .4990 .5575 .044 Uiso calc PR .50 . 1 H C2A .4644(14) .4290(12) .5413(5) .0369(11) Uani d PD .50 A 1 C H2A1 .5077 .3402 .5345 .044 Uiso calc PR .50 A 1 H H2A2 .4165 .4286 .5721 .044 Uiso calc PR .50 A 1 H C3A .324(2) .4665(10) .5079(3) .0384(10) Uani d PD .50 . 1 C H3A1 .2304 .4003 .5088 .046 Uiso calc PR .50 . 1 H H3A2 .2731 .5516 .5167 .046 Uiso calc PR .50 . 1 H N1B .6120(5) .3897(4) .50377(12) .0361(11) Uani d PD .50 . 2 N H1B .6984 .3450 .5184 .043 Uiso calc PR .50 . 2 H H2B .5766 .3396 .4798 .043 Uiso calc PR .50 . 2 H C2B .4650(14) .4083(13) .5348(5) .0369(11) Uani d PD .50 B 2 C H2B1 .4211 .3219 .5444 .044 Uiso calc PR .50 B 2 H H2B2 .5054 .4553 .5619 .044 Uiso calc PR .50 B 2 H C3B .318(2) .4853(8) .5132(3) .0384(10) Uani d PD .50 . 2 C H3B1 .2675 .4345 .4881 .046 Uiso calc PR .50 . 2 H H3B2 .2262 .5021 .5356 .046 Uiso calc PR .50 . 2 H O4 1.0545(3) .64236(19) .63172(7) .0625(6) Uani d . 1 . . O H31 .9826 .5963 .6178 .094 Uiso calc R 1 . . H C4 .9711(4) .7525(3) .64941(8) .0468(8) Uani d . 1 . . C H41 .9040 .7272 .6759 .070 Uiso calc R 1 . . H H42 .8934 .7895 .6267 .070 Uiso calc R 1 . . H H43 1.0575 .8180 .6580 .070 Uiso calc R 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 .0443(13) .0341(11) .0544(11) .0059(10) -.0040(9) -.0032(8) O2 .0784(16) .0412(12) .0566(12) .0075(11) -.0323(11) -.0092(10) O3 .0503(14) .0470(12) .0441(10) .0140(10) -.0044(9) -.0092(9) C11 .0315(17) .0349(16) .0392(14) .0028(13) -.0071(12) .0007(12) C12 .046(2) .0350(17) .0473(17) .0031(14) -.0044(14) -.0034(13) C13 .052(2) .0401(17) .0565(18) .0001(16) -.0028(15) .0092(15) C14 .0462(19) .054(2) .0438(16) .0054(16) -.0046(13) .0100(14) C15 .054(2) .0503(19) .0362(16) .0061(16) -.0046(14) -.0020(13) C16 .052(2) .0345(16) .0408(16) .0011(14) -.0093(14) -.0024(12) C17 .0360(17) .0335(15) .0391(14) -.0004(14) -.0034(12) -.0057(12) C18 .0438(19) .0323(15) .0337(15) -.0032(14) -.0007(13) .0022(12) N1A .041(3) .037(2) .032(2) .008(2) -.0099(19) -.0055(18) C2A .0422(19) .040(3) .029(3) -.006(2) -.0017(18) -.0043(19) C3A .041(2) .037(3) .037(2) .001(2) -.001(2) -.0002(17) N1B .039(3) .035(3) .034(2) .007(2) -.0081(19) -.0022(18) C2B .0422(19) .040(3) .029(3) -.006(2) -.0017(18) -.0043(19) C3B .041(2) .037(3) .037(2) .001(2) -.001(2) -.0002(17) O4 .0443(14) .0442(12) .0990(16) -.0069(10) .0116(12) -.0199(11) C4 .046(2) .0452(17) .0492(15) -.0015(15) .0054(14) -.0022(13) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .0033 .0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H .0000 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N .0061 .0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O .0106 .0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle C17 O3 H3 . 109.5 C12 C11 C16 . 118.2(2) C12 C11 C17 . 120.9(2) C16 C11 C17 . 120.8(2) C13 C12 C11 . 120.6(2) C13 C12 H12 . 119.7 C11 C12 H12 . 119.7 C14 C13 C12 . 120.6(3) C14 C13 H13 . 119.7 C12 C13 H13 . 119.7 C13 C14 C15 . 119.1(3) C13 C14 H14 . 120.4 C15 C14 H14 . 120.4 C16 C15 C14 . 120.6(3) C16 C15 H15 . 119.7 C14 C15 H15 . 119.7 C15 C16 C11 . 120.8(3) C15 C16 H16 . 119.6 C11 C16 H16 . 119.6 O3 C17 C11 . 112.9(2) O3 C17 C18 . 107.82(18) C11 C17 C18 . 110.6(2) O3 C17 H17 . 108.5 C11 C17 H17 . 108.5 C18 C17 H17 . 108.5 O2 C18 O1 . 124.4(2) O2 C18 C17 . 118.4(2) O1 C18 C17 . 117.2(2) C3A N1A C2A 5_666 111.6(4) C3A N1A H1A 5_666 109.3 C2A N1A H1A . 109.3 C3A N1A H2A 5_666 109.3 C2A N1A H2A . 109.3 H1A N1A H2A . 108.0 C3A C2A N1A . 109.4(12) C3A C2A H2A1 . 109.8 N1A C2A H2A1 . 109.8 C3A C2A H2A2 . 109.8 N1A C2A H2A2 . 109.8 H2A1 C2A H2A2 . 108.2 N1A C3A C2A 5_666 111.6(12) N1A C3A H3A1 5_666 109.3 C2A C3A H3A1 . 109.3 N1A C3A H3A2 5_666 109.3 C2A C3A H3A2 . 109.3 H3A1 C3A H3A2 . 108.0 C3B N1B C2B 5_666 112.6(4) C3B N1B H1B 5_666 109.1 C2B N1B H1B . 109.1 C3B N1B H2B 5_666 109.1 C2B N1B H2B . 109.1 H1B N1B H2B . 107.8 C3B C2B N1B . 112.1(13) C3B C2B H2B1 . 109.2 N1B C2B H2B1 . 109.2 C3B C2B H2B2 . 109.2 N1B C2B H2B2 . 109.2 H2B1 C2B H2B2 . 107.9 N1B C3B C2B 5_666 108.6(12) N1B C3B H3B1 5_666 110.0 C2B C3B H3B1 . 110.0 N1B C3B H3B2 5_666 110.0 C2B C3B H3B2 . 110.0 H3B1 C3B H3B2 . 108.3 C4 O4 H31 . 109.5 O4 C4 H41 . 109.5 O4 C4 H42 . 109.5 H41 C4 H42 . 109.5 O4 C4 H43 . 109.5 H41 C4 H43 . 109.5 H42 C4 H43 . 109.5 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance O1 C18 . 1.258(3) O2 C18 . 1.250(3) O3 C17 . 1.424(3) O3 H3 . .84 C11 C12 . 1.389(3) C11 C16 . 1.392(3) C11 C17 . 1.521(3) C12 C13 . 1.382(3) C12 H12 . .95 C13 C14 . 1.377(4) C13 H13 . .95 C14 C15 . 1.380(4) C14 H14 . .95 C15 C16 . 1.376(3) C15 H15 . .95 C16 H16 . .95 C17 C18 . 1.528(4) C17 H17 . 1.00 N1A C3A 5_666 1.479(3) N1A C2A . 1.478(3) N1A H1A . .92 N1A H2A . .92 C2A C3A . 1.525(3) C2A H2A1 . .99 C2A H2A2 . .99 C3A N1A 5_666 1.479(3) C3A H3A1 . .99 C3A H3A2 . .99 N1B C3B 5_666 1.479(3) N1B C2B . 1.478(3) N1B H1B . .92 N1B H2B . .92 C2B C3B . 1.525(3) C2B H2B1 . .99 C2B H2B2 . .99 C3B N1B 5_666 1.478(3) C3B H3B1 . .99 C3B H3B2 . .99 O4 C4 . 1.402(3) O4 H31 . .84 C4 H41 . .98 C4 H42 . .98 C4 H43 . .98 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N1A H2A O1 . .92 1.67 2.588(4) 177 y N1A H1A O2 7_765 .92 1.88 2.686(4) 144 y N1A H1A O3 7_765 .92 2.37 3.137(4) 141 y N1B H1B O2 . .92 1.77 2.678(4) 171 y N1B H2B O3 3_456 .92 2.09 2.841(4) 137 y N1B H2B O2 3_456 .92 2.15 2.967(4) 147 y O3 H3 O4 7_855 .84 1.82 2.658(3) 176 y O4 H31 O1 . .84 1.86 2.682(3) 166 y loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_4 _geom_torsion C16 C11 C12 C13 . . -.5(4) C17 C11 C12 C13 . . -177.3(2) C11 C12 C13 C14 . . .9(4) C12 C13 C14 C15 . . -.4(4) C13 C14 C15 C16 . . -.4(4) C14 C15 C16 C11 . . .8(4) C12 C11 C16 C15 . . -.3(4) C17 C11 C16 C15 . . 176.5(2) C12 C11 C17 O3 . . -31.4(3) C16 C11 C17 O3 . . 152.0(2) C12 C11 C17 C18 . . 89.5(3) C16 C11 C17 C18 . . -87.1(3) O3 C17 C18 O2 . . 18.0(3) C11 C17 C18 O2 . . -106.0(3) O3 C17 C18 O1 . . -163.9(2) C11 C17 C18 O1 . . 72.2(3) C3A N1A C2A C3A 5_666 . -56.1(10) N1A C2A C3A N1A . 5_666 56.1(8) C3B N1B C2B C3B 5_666 . 57.2(10) N1B C2B C3B N1B . 5_666 -55.0(8)