#------------------------------------------------------------------------------ #$Date: 2012-02-03 19:16:24 +0200 (Fri, 03 Feb 2012) $ #$Revision: 32112 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/01/23/2012391.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2012391 loop_ _publ_author_name 'Anwar Usman' 'Suchada Chantrapromma' 'Hoong-Kun Fun' _publ_section_title ; The 143 and 300K polymorphs of hexamethylenetetraminium 2,4-dinitrophenolate monohydrate ; _journal_issue 12 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 1443 _journal_page_last 1446 _journal_volume 57 _journal_year 2001 _chemical_formula_iupac 'C6 H13 N4 1+, C6 H3 N2 O5 1-, H2 O' _chemical_formula_moiety 'C6 H13 N4 1+, C6 H3 N2 O5 1-, H2 O' _chemical_formula_sum 'C12 H18 N6 O6' _chemical_formula_weight 342.32 _chemical_name_systematic ; 3,5,7-triaza-1-azoniatricyclo[3.3.1.1^3,7^]decane 2,4-dinitrophenolate monohydrate ; _space_group_IT_number 11 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yb' _symmetry_space_group_name_H-M 'P 1 21/m 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 94.9150(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 7.8610(5) _cell_length_b 6.5980(4) _cell_length_c 14.4339(9) _cell_measurement_reflns_used 3560 _cell_measurement_temperature 300(2) _cell_measurement_theta_max 29.56 _cell_measurement_theta_min 1.42 _cell_volume 745.89(8) _computing_cell_refinement 'SAINT (Siemens, 1996)' _computing_data_collection 'SMART (Siemens, 1996)' _computing_data_reduction SAINT _computing_molecular_graphics SHELXTL _computing_publication_material ; SHELXTL, PARST (Nardelli, 1995) and PLATON (Spek, 1990) ; _computing_structure_refinement SHELXTL _computing_structure_solution 'SHELXTL (Sheldrick, 1997)' _diffrn_ambient_temperature 300(2) _diffrn_detector_area_resol_mean 8.33 _diffrn_measured_fraction_theta_full .967 _diffrn_measured_fraction_theta_max .967 _diffrn_measurement_device_type 'Siemens SMART CCD area-detector' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength .71073 _diffrn_reflns_av_R_equivalents .0686 _diffrn_reflns_av_sigmaI/netI .0957 _diffrn_reflns_limit_h_max 9 _diffrn_reflns_limit_h_min -10 _diffrn_reflns_limit_k_max 7 _diffrn_reflns_limit_k_min -8 _diffrn_reflns_limit_l_max 18 _diffrn_reflns_limit_l_min -19 _diffrn_reflns_number 5088 _diffrn_reflns_theta_full 28.00 _diffrn_reflns_theta_max 28.00 _diffrn_reflns_theta_min 2.60 _diffrn_standards_decay_% negligible _exptl_absorpt_coefficient_mu .124 _exptl_absorpt_correction_T_max .9757 _exptl_absorpt_correction_T_min .9498 _exptl_absorpt_correction_type empirical _exptl_absorpt_process_details '(SADABS; Sheldrick, 1996)' _exptl_crystal_colour Yellow _exptl_crystal_density_diffrn 1.524 _exptl_crystal_density_method 'not measured' _exptl_crystal_description Block _exptl_crystal_F_000 360 _exptl_crystal_size_max .42 _exptl_crystal_size_mid .24 _exptl_crystal_size_min .20 _refine_diff_density_max .334 _refine_diff_density_min -.313 _refine_ls_extinction_coef .145(17) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXTL _refine_ls_goodness_of_fit_ref .948 _refine_ls_hydrogen_treatment refall _refine_ls_matrix_type full _refine_ls_number_parameters 178 _refine_ls_number_reflns 1900 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all .948 _refine_ls_R_factor_all .0743 _refine_ls_R_factor_gt .0589 _refine_ls_shift/su_max <0.001 _refine_ls_shift/su_mean .000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0622P)^2^] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt .1374 _refine_ls_wR_factor_ref .1437 _reflns_number_gt 1288 _reflns_number_total 1900 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file sk1495.cif _[local]_cod_data_source_block Iat300K _[local]_cod_cif_authors_sg_H-M 'P 21/m' _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2012391 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z' '-x, -y, -z' 'x, -y-1/2, z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol N1 .3354(3) .2500 .24704(13) .0402(5) Uani d S 1 . . N N2 .0558(2) .2500 .53083(13) .0432(6) Uani d S 1 . . N N3 .7478(2) .7500 .20852(12) .0325(5) Uani d S 1 . . N H1N3 .727(4) .7500 .265(2) .047 Uiso d S 1 . . H N4 .88545(17) .5660(2) .09159(9) .0337(4) Uani d . 1 . . N N5 .6216(2) .7500 .04920(13) .0351(5) Uani d S 1 . . N O1 .4692(3) .2500 .20695(11) .0526(6) Uani d S 1 . . O O2 .1928(3) .2500 .20416(12) .0621(6) Uani d S 1 . . O O3 -.0775(2) .2500 .48100(14) .0754(8) Uani d S 1 . . O O4 .0538(2) .2500 .61478(13) .0811(9) Uani d S 1 . . O O5 .3979(2) .2500 .63206(10) .0465(5) Uani d S 1 . . O O1W .2668(3) .7500 .28182(14) .0585(6) Uani d S 1 . . O H1W1 .379(4) .7500 .313(2) .060(9) Uiso d S 1 . . H H2W1 .208(6) .7500 .318(3) .109(18) Uiso d S 1 . . H C1 .3505(3) .2500 .34722(14) .0315(5) Uani d S 1 . . C C2 .2036(3) .2500 .39233(15) .0341(6) Uani d S 1 . . C H2A .100(3) .2500 .3631(18) .040(7) Uiso d S 1 . . H C3 .2154(3) .2500 .48886(14) .0312(5) Uani d S 1 . . C C4 .3758(3) .2500 .54426(14) .0317(5) Uani d S 1 . . C C5 .5219(3) .2500 .49069(16) .0401(6) Uani d S 1 . . C H5A .623(4) .2500 .522(2) .049(8) Uiso d S 1 . . H C6 .5104(3) .2500 .39662(15) .0356(6) Uani d S 1 . . C H6A .607(3) .2500 .3653(18) .045(7) Uiso d S 1 . . H C7 .5830(3) .7500 .14533(17) .0393(6) Uani d S 1 . . C H7A .516(2) .628(3) .1585(13) .045(5) Uiso d . 1 . . H C8 .7247(2) .5697(3) .03182(12) .0390(4) Uani d . 1 . . C H8A .655(2) .442(3) .0453(13) .047(5) Uiso d . 1 . . H C9 .8499(2) .5642(3) .18767(11) .0353(4) Uani d . 1 . . C H9B .957(2) .563(3) .2306(13) .045 Uiso d . 1 . . H C10 .9820(3) .7500 .07362(16) .0368(6) Uani d S 1 . . C H11A 1.009(3) .7500 .0117(19) .044 Uiso d S 1 . . H H8B .754(2) .579(3) -.0316(15) .048(5) Uiso d . 1 . . H H9A .784(3) .453(3) .2013(14) .053(6) Uiso d . 1 . . H H11B 1.088(4) .7500 .1155(19) .045(7) Uiso d S 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 N1 .0491(13) .0472(13) .0248(10) .000 .0058(9) .000 N2 .0238(10) .0765(16) .0296(10) .000 .0044(8) .000 N3 .0361(11) .0453(12) .0165(9) .000 .0049(8) .000 N4 .0412(8) .0327(8) .0269(7) .0056(6) .0007(6) -.0029(5) N5 .0344(11) .0420(12) .0276(10) .000 -.0053(8) .000 O1 .0588(12) .0720(14) .0295(9) .000 .0190(8) .000 O2 .0564(13) .1013(18) .0269(9) .000 -.0061(9) .000 O3 .0228(9) .156(2) .0465(12) .000 -.0018(8) .000 O4 .0330(11) .182(3) .0295(10) .000 .0110(8) .000 O5 .0292(9) .0894(15) .0210(8) .000 .0022(6) .000 O1W .0396(12) .0976(18) .0368(11) .000 -.0054(9) .000 C1 .0385(13) .0358(13) .0209(10) .000 .0059(9) .000 C2 .0276(12) .0477(15) .0266(11) .000 -.0009(9) .000 C3 .0248(11) .0451(14) .0244(11) .000 .0063(8) .000 C4 .0277(11) .0450(14) .0228(10) .000 .0043(8) .000 C5 .0236(11) .0676(18) .0292(12) .000 .0023(9) .000 C6 .0301(12) .0501(15) .0281(11) .000 .0110(9) .000 C7 .0291(12) .0535(17) .0357(13) .000 .0045(10) .000 C8 .0489(11) .0368(10) .0301(9) -.0013(8) -.0043(7) -.0063(7) C9 .0438(10) .0329(9) .0289(9) .0001(7) .0010(7) .0064(7) C10 .0341(13) .0516(16) .0252(11) .000 .0064(10) .000 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag N1 O2 . 1.234(3) yes N1 O1 . 1.243(3) yes N1 C1 . 1.441(3) yes N2 O4 . 1.213(3) yes N2 O3 . 1.219(3) yes N2 C3 . 1.440(3) yes N3 C9 4_575 1.510(2) no N3 C9 . 1.510(2) yes N3 C7 . 1.519(3) yes N3 H1N3 . .85(3) no N4 C9 . 1.438(2) yes N4 C10 . 1.4666(19) yes N4 C8 . 1.468(2) yes N5 C7 . 1.446(3) yes N5 C8 4_575 1.473(2) no N5 C8 . 1.473(2) yes O5 C4 . 1.264(3) yes O1W H1W1 . .96(3) no O1W H2W1 . .73(5) no C1 C2 . 1.374(3) no C1 C6 . 1.391(3) no C2 C3 . 1.388(3) no C2 H2A . .88(3) no C3 C4 . 1.434(3) no C4 C5 . 1.438(3) no C5 C6 . 1.353(3) no C5 H5A . .87(3) ? C6 H6A . .91(3) ? C7 H7A . .989(19) ? C8 H8A . 1.029(19) ? C8 H8B . .97(2) ? C9 H9B . 1.00(2) ? C9 H9A . .93(2) ? C10 N4 4_575 1.4666(19) no C10 H11A . .94(3) ? C10 H11B . .99(3) ? loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .0033 .0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H .0000 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N .0061 .0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O .0106 .0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O2 N1 O1 . . 122.4(2) yes O2 N1 C1 . . 119.8(2) ? O1 N1 C1 . . 117.9(2) ? O4 N2 O3 . . 120.4(2) yes O4 N2 C3 . . 120.4(2) ? O3 N2 C3 . . 119.20(19) ? C9 N3 C9 4_575 . 108.61(18) yes C9 N3 C7 4_575 . 108.71(11) yes C9 N3 C7 . . 108.71(11) yes C9 N3 H1N3 4_575 . 110.0(10) ? C9 N3 H1N3 . . 110.0(10) ? C7 N3 H1N3 . . 111(2) ? C9 N4 C10 . . 108.88(14) yes C9 N4 C8 . . 109.75(14) yes C10 N4 C8 . . 108.35(15) yes C7 N5 C8 . 4_575 109.10(12) no C7 N5 C8 . . 109.10(12) yes C8 N5 C8 4_575 . 107.76(19) yes H1W1 O1W H2W1 . . 106(4) no C2 C1 C6 . . 121.11(19) ? C2 C1 N1 . . 118.4(2) ? C6 C1 N1 . . 120.51(19) ? C1 C2 C3 . . 119.3(2) ? C1 C2 H2A . . 123.4(16) ? C3 C2 H2A . . 117.4(16) ? C2 C3 C4 . . 122.66(19) ? C2 C3 N2 . . 115.9(2) ? C4 C3 N2 . . 121.47(18) ? O5 C4 C3 . . 126.68(19) ? O5 C4 C5 . . 119.4(2) ? C3 C4 C5 . . 113.87(19) ? C6 C5 C4 . . 123.5(2) ? C6 C5 H5A . . 119.5(18) ? C4 C5 H5A . . 117.1(18) ? C5 C6 C1 . . 119.6(2) ? C5 C6 H6A . . 120.6(17) ? C1 C6 H6A . . 119.8(17) ? N5 C7 N3 . . 109.74(18) yes N5 C7 H7A . . 110.1(11) ? N3 C7 H7A . . 109.0(11) ? N4 C8 N5 . . 111.82(13) yes N4 C8 H8A . . 108.6(11) ? N5 C8 H8A . . 108.6(10) ? N4 C8 H8B . . 106.9(12) ? N5 C8 H8B . . 106.9(11) ? H8A C8 H8B . . 114.0(15) ? N4 C9 N3 . . 109.65(13) yes N4 C9 H9B . . 112.0(10) ? N3 C9 H9B . . 108.3(11) ? N4 C9 H9A . . 111.7(12) ? N3 C9 H9A . . 106.4(12) ? H9B C9 H9A . . 108.7(16) ? N4 C10 N4 . 4_575 111.77(18) yes N4 C10 H11A . . 109.4(8) ? N4 C10 H11A 4_575 . 109.4(8) ? N4 C10 H11B . . 108.3(7) ? N4 C10 H11B 4_575 . 108.3(7) ? H11A C10 H11B . . 110(2) ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N3 H13N O5 2_656 .85(3) 1.85(3) 2.657(2) 159(3) yes O1W H11W O5 2_656 .96(3) 1.86(3) 2.816(3) 177(3) yes O1W H21W O4 2_556 .73(5) 2.35(5) 3.037(3) 159(5) yes C5 H5A O3 1_655 .88(3) 2.48(3) 3.164(3) 135(2) yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_4 _geom_torsion O2 N1 C1 C2 . . .0 O1 N1 C1 C2 . . 180.0 O2 N1 C1 C6 . . 180.0 O1 N1 C1 C6 . . .0 C6 C1 C2 C3 . . .0 N1 C1 C2 C3 . . 180.0 C1 C2 C3 C4 . . .0 C1 C2 C3 N2 . . 180.0 O4 N2 C3 C2 . . 180.0 O3 N2 C3 C2 . . .0 O4 N2 C3 C4 . . .0 O3 N2 C3 C4 . . 180.0 C2 C3 C4 O5 . . 180.0 N2 C3 C4 O5 . . .0 C2 C3 C4 C5 . . .0 N2 C3 C4 C5 . . 180.0 O5 C4 C5 C6 . . 180.0 C3 C4 C5 C6 . . .0 C4 C5 C6 C1 . . .0 C2 C1 C6 C5 . . .0 N1 C1 C6 C5 . . 180.0 C8 N5 C7 N3 4_575 . -58.75(12) C8 N5 C7 N3 . . 58.75(12) C9 N3 C7 N5 4_575 . 59.03(10) C9 N3 C7 N5 . . -59.03(10) C9 N4 C8 N5 . . 59.88(18) C10 N4 C8 N5 . . -58.89(18) C7 N5 C8 N4 . . -59.55(19) C8 N5 C8 N4 4_575 . 58.8(2) C10 N4 C9 N3 . . 59.37(19) C8 N4 C9 N3 . . -59.07(18) C9 N3 C9 N4 4_575 . -59.2(2) C7 N3 C9 N4 . . 58.92(18) C9 N4 C10 N4 . 4_575 -60.7(2) C8 N4 C10 N4 . 4_575 58.6(2)