#------------------------------------------------------------------------------ #$Date: 2011-09-10 06:16:28 +0300 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/2012392.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2012392 loop_ _publ_author_name 'Usman, Anwar' 'Chantrapromma, Suchada' 'Fun, Hoong-Kun' _publ_section_title ; The 143 and 300K polymorphs of hexamethylenetetraminium 2,4-dinitrophenolate monohydrate ; _journal_issue 12 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 1443 _journal_page_last 1446 _journal_volume 57 _journal_year 2001 _chemical_formula_iupac 'C6 H13 N4 1+, C6 H3 N2 O5 1-, H2 O' _chemical_formula_moiety 'C6 H13 N4 1+, C6 H3 N2 O5 1-, H2 O' _chemical_formula_sum 'C12 H18 N6 O6' _chemical_formula_weight 342.32 _chemical_name_systematic ; Hexamethylenetetramine-2,4-dinitrophenol Hydrate ; _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 84.4120(10) _cell_angle_beta 86.3670(10) _cell_angle_gamma 89.3040(10) _cell_formula_units_Z 2 _cell_length_a 6.3877(4) _cell_length_b 7.9017(5) _cell_length_c 14.4042(9) _cell_measurement_reflns_used 3560 _cell_measurement_temperature 143(2) _cell_measurement_theta_max 29.56 _cell_measurement_theta_min 1.42 _cell_volume 722.11(8) _computing_cell_refinement 'SAINT (Siemens, 1996)' _computing_data_collection 'SMART (Siemens, 1996)' _computing_data_reduction SAINT _computing_molecular_graphics SHELXTL _computing_publication_material ; SHELXTL, PARST (Nardelli, 1995) and PLATON (Spek, 1990) ; _computing_structure_refinement SHELXTL _computing_structure_solution 'SHELXTL (Sheldrick, 1997)' _diffrn_ambient_temperature 143(2) _diffrn_detector_area_resol_mean 8.33 _diffrn_measured_fraction_theta_full .921 _diffrn_measured_fraction_theta_max .921 _diffrn_measurement_device_type 'Siemens SMART CCD area-detector' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength .71073 _diffrn_reflns_av_R_equivalents .0728 _diffrn_reflns_av_sigmaI/netI .1532 _diffrn_reflns_limit_h_max 6 _diffrn_reflns_limit_h_min -8 _diffrn_reflns_limit_k_max 10 _diffrn_reflns_limit_k_min -10 _diffrn_reflns_limit_l_max 18 _diffrn_reflns_limit_l_min -18 _diffrn_reflns_number 4841 _diffrn_reflns_theta_full 28.00 _diffrn_reflns_theta_max 28.00 _diffrn_reflns_theta_min 2.59 _diffrn_standards_decay_% negligible _exptl_absorpt_coefficient_mu .128 _exptl_absorpt_correction_T_max .9749 _exptl_absorpt_correction_T_min .9482 _exptl_absorpt_correction_type empirical _exptl_absorpt_process_details '(SADABS; Sheldrick, 1996)' _exptl_crystal_colour Yellow _exptl_crystal_density_diffrn 1.574 _exptl_crystal_density_method 'not measured' _exptl_crystal_description Block _exptl_crystal_F_000 360 _exptl_crystal_size_max .42 _exptl_crystal_size_mid .24 _exptl_crystal_size_min .20 _refine_diff_density_max .543 _refine_diff_density_min -.537 _refine_ls_extinction_coef .099(15) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXTL _refine_ls_goodness_of_fit_ref .956 _refine_ls_hydrogen_treatment refall _refine_ls_matrix_type full _refine_ls_number_parameters 281 _refine_ls_number_reflns 3227 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all .956 _refine_ls_R_factor_all .1015 _refine_ls_R_factor_gt .0865 _refine_ls_shift/su_max <0.001 _refine_ls_shift/su_mean .000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.077P)^2^] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt .1971 _refine_ls_wR_factor_ref .2059 _reflns_number_gt 2201 _reflns_number_total 3227 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file sk1495.cif _[local]_cod_data_source_block Iat143K _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Triclinic' changed to 'triclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2012392 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_occupancy _atom_site_type_symbol N1 .2752(3) .6767(3) -.25439(15) .0154(5) Uani d 1 N N2 .2440(3) .9482(3) .03112(14) .0147(5) Uani d 1 N N3 .2238(3) .7463(3) .29237(15) .0133(5) Uani d 1 N H1N3 .219(5) .733(4) .239(2) .025 Uiso d 1 H N4 .4515(3) .8628(3) .39867(15) .0140(5) Uani d 1 N N4A .0720(3) .9031(3) .41653(15) .0145(5) Uani d 1 N N5 .2253(3) .6220(3) .45392(15) .0145(5) Uani d 1 N O1 .2775(3) .5438(2) -.29495(13) .0222(5) Uani d 1 O O2 .2812(3) .8190(3) -.29746(13) .0233(5) Uani d 1 O O3 .2575(4) 1.0828(2) -.01981(14) .0272(5) Uani d 1 O O4 .2269(4) .9473(3) .11750(14) .0288(6) Uani d 1 O O5 .2311(3) .6037(2) .13357(12) .0178(5) Uani d 1 O O1W -.2302(3) .7318(3) -.22082(14) .0242(5) Uani d 1 O H1W1 -.234(5) .622(5) -.189(2) .028 Uiso d 1 H H2W1 -.240(5) .796(5) -.175(2) .029 Uiso d 1 H C1 .2629(4) .6592(3) -.15335(16) .0127(5) Uani d 1 C C2 .2576(4) .8054(3) -.10769(18) .0140(6) Uani d 1 C H2 .256(5) .919(5) -.140(2) .035(10) Uiso d 1 H C3 .2473(4) .7898(3) -.01062(16) .0115(5) Uani d 1 C C4 .2418(4) .6288(3) .04504(17) .0123(5) Uani d 1 C C5 .2503(4) .4839(3) -.00912(18) .0156(6) Uani d 1 C H5A .247(5) .373(4) .020(2) .022(8) Uiso d 1 H C6 .2602(4) .4979(3) -.10400(18) .0136(5) Uani d 1 C H6A .263(4) .404(4) -.139(2) .021(8) Uiso d 1 H C7 .2059(4) .5831(3) .35838(18) .0156(6) Uani d 1 C H7B .069(5) .532(4) .348(2) .020(8) Uiso d 1 H H7A .322(5) .505(4) .334(2) .024 Uiso d 1 H C8 .4297(4) .7033(3) .45981(19) .0162(6) Uani d 1 C H8B .554(5) .625(4) .451(2) .022 Uiso d 1 H H8A .438(5) .727(4) .519(2) .028(9) Uiso d 1 H C8A .0584(4) .7438(3) .47820(18) .0152(6) Uani d 1 C H8AB -.084(5) .689(4) .469(2) .022 Uiso d 1 H H8AA .072(5) .767(4) .547(2) .027(8) Uiso d 1 H C9 .4339(4) .8273(3) .30282(18) .0148(6) Uani d 1 C H9B .448(5) .931(4) .259(2) .021(8) Uiso d 1 H H9A .545(5) .749(4) .283(2) .028 Uiso d 1 H C9A .0505(4) .8664(3) .32122(18) .0150(5) Uani d 1 C H9AB .069(5) .961(4) .278(2) .024 Uiso d 1 H H9AA -.084(5) .801(4) .314(2) .019(8) Uiso d 1 H C10 .2787(4) .9795(3) .42406(18) .0149(6) Uani d 1 C H10B .290(5) 1.087(4) .385(2) .029 Uiso d 1 H H10A .279(4) 1.002(4) .486(2) .019(8) Uiso d 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 N1 .0139(11) .0187(11) .0140(11) .0035(9) -.0013(8) -.0036(9) N2 .0242(12) .0093(10) .0112(10) .0044(9) -.0043(8) -.0023(8) N3 .0184(12) .0132(11) .0091(10) .0033(8) -.0036(8) -.0040(9) N4 .0137(11) .0131(11) .0158(11) .0003(8) -.0034(8) -.0029(9) N4A .0141(11) .0139(11) .0162(11) .0024(8) -.0015(8) -.0045(9) N5 .0174(12) .0117(10) .0145(11) .0015(8) -.0016(8) -.0020(9) O1 .0297(12) .0217(11) .0172(10) .0072(8) -.0035(8) -.0115(8) O2 .0368(13) .0184(10) .0144(10) .0032(8) -.0017(8) .0000(8) O3 .0528(14) .0087(9) .0203(11) .0015(9) -.0044(9) -.0005(8) O4 .0617(16) .0135(10) .0122(9) .0042(9) -.0043(9) -.0053(8) O5 .0334(12) .0110(9) .0092(9) .0013(8) -.0029(7) -.0020(7) O1W .0399(13) .0158(10) .0165(10) .0018(9) -.0022(8) -.0001(9) C1 .0142(13) .0163(13) .0083(11) .0035(10) -.0020(9) -.0043(10) C2 .0152(13) .0122(12) .0148(12) .0024(10) -.0013(9) -.0021(10) C3 .0158(13) .0074(11) .0121(12) .0024(9) -.0043(9) -.0033(10) C4 .0137(12) .0099(12) .0144(12) .0022(9) -.0030(9) -.0050(10) C5 .0235(14) .0083(12) .0155(13) .0022(10) -.0022(9) -.0026(10) C6 .0156(13) .0120(12) .0142(12) .0026(9) -.0017(9) -.0055(10) C7 .0207(14) .0090(12) .0184(13) .0021(10) -.0052(10) -.0050(10) C8 .0170(14) .0162(13) .0155(12) .0003(10) -.0051(10) .0007(11) C8A .0165(13) .0146(13) .0145(12) .0020(10) -.0005(9) -.0025(10) C9 .0135(13) .0156(13) .0150(12) .0008(10) .0010(9) -.0018(11) C9A .0128(13) .0166(13) .0165(12) .0045(10) -.0035(9) -.0059(11) C10 .0180(14) .0136(13) .0141(12) .0017(10) -.0029(9) -.0057(11) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .0033 .0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H .0000 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N .0061 .0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O .0106 .0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag O2 N1 O1 122.3(2) yes O2 N1 C1 120.0(2) ? O1 N1 C1 117.8(2) ? O3 N2 O4 121.1(2) yes O3 N2 C3 119.2(2) ? O4 N2 C3 119.7(2) ? C9A N3 C9 108.9(2) yes C9A N3 C7 108.2(2) yes C9 N3 C7 108.6(2) yes C9A N3 H1N3 110(3) ? C9 N3 H1N3 107(2) ? C7 N3 H1N3 115(2) ? C9 N4 C8 109.0(2) yes C9 N4 C10 108.4(2) yes C8 N4 C10 108.8(2) yes C9A N4A C8A 109.2(2) yes C9A N4A C10 109.48(19) yes C8A N4A C10 108.5(2) yes C7 N5 C8 108.7(2) yes C7 N5 C8A 108.8(2) yes C8 N5 C8A 108.3(2) yes H1W1 O1W H2W1 102(3) no C2 C1 C6 121.4(2) ? C2 C1 N1 118.3(2) ? C6 C1 N1 120.3(2) ? C1 C2 C3 118.7(2) ? C1 C2 H2 123(2) ? C3 C2 H2 118(2) ? C2 C3 C4 123.2(2) ? C2 C3 N2 115.0(2) ? C4 C3 N2 121.8(2) ? O5 C4 C3 127.1(2) ? O5 C4 C5 119.0(2) ? C3 C4 C5 113.9(2) ? C6 C5 C4 123.3(2) ? C6 C5 H5A 115(2) ? C4 C5 H5A 122(2) ? C5 C6 C1 119.4(2) ? C5 C6 H6A 123.3(19) ? C1 C6 H6A 117.3(19) ? N5 C7 N3 109.75(19) yes N5 C7 H7B 113.7(17) ? N3 C7 H7B 106.0(18) ? N5 C7 H7A 114.4(18) ? N3 C7 H7A 104.7(17) ? H7B C7 H7A 108(3) ? N4 C8 N5 112.3(2) yes N4 C8 H8B 111.7(17) ? N5 C8 H8B 114.1(18) ? N4 C8 H8A 108(2) ? N5 C8 H8A 107(2) ? H8B C8 H8A 102(3) ? N4A C8A N5 112.07(19) yes N4A C8A H8AB 107.4(18) ? N5 C8A H8AB 107.8(17) ? N4A C8A H8AA 110.5(18) ? N5 C8A H8AA 107.6(19) ? H8AB C8A H8AA 112(2) ? N4 C9 N3 110.08(19) yes N4 C9 H9B 112.0(18) ? N3 C9 H9B 108.9(18) ? N4 C9 H9A 111(2) ? N3 C9 H9A 108(2) ? H9B C9 H9A 107(2) ? N4A C9A N3 109.7(2) yes N4A C9A H9AB 113(2) ? N3 C9A H9AB 103.5(19) ? N4A C9A H9AA 112.2(16) ? N3 C9A H9AA 103.7(17) ? H9AB C9A H9AA 114(3) ? N4A C10 N4 111.5(2) yes N4A C10 H10B 110(2) ? N4 C10 H10B 110.8(19) ? N4A C10 H10A 104.1(18) ? N4 C10 H10A 111.9(19) ? H10B C10 H10A 108(3) ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag N1 O2 1.230(3) yes N1 O1 1.250(3) yes N1 C1 1.446(3) yes N2 O3 1.232(3) yes N2 O4 1.241(3) yes N2 C3 1.440(3) yes N3 C9A 1.514(3) yes N3 C9 1.516(3) yes N3 C7 1.526(3) yes N3 H1N3 .79(3) no N4 C9 1.447(3) yes N4 C8 1.469(3) yes N4 C10 1.480(3) yes N4A C9A 1.446(3) yes N4A C8A 1.468(3) yes N4A C10 1.473(3) yes N5 C7 1.452(3) yes N5 C8 1.473(3) yes N5 C8A 1.476(3) yes O5 C4 1.269(3) yes O1W H1W1 .94(3) no O1W H2W1 .87(4) no C1 C2 1.383(3) no C1 C6 1.398(4) no C2 C3 1.389(3) no C2 H2 .97(4) ? C3 C4 1.436(3) no C4 C5 1.446(3) no C5 C6 1.358(3) no C5 H5A .93(3) ? C6 H6A .94(3) ? C7 H7B 1.00(3) ? C7 H7A 1.03(3) ? C8 H8B 1.01(3) ? C8 H8A .90(3) ? C8A H8AB 1.03(3) ? C8A H8AA 1.03(3) ? C9 H9B .99(3) ? C9 H9A .98(3) ? C9A H9AB .93(3) ? C9A H9AA 1.03(3) ? C10 H10B .97(3) ? C10 H10A .92(3) ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N3 H13N O5 1_555 .79(3) 1.91(3) 2.644(3) 155(3) yes O1W H11W O5 2_565 .94(4) 1.88(4) 2.821(3) 176(3) yes O1W H21W O4 2_575 .87(3) 2.27(4) 3.064(3) 152(3) yes C5 H5A O3 1_545 .93(3) 2.42(3) 3.188(3) 140(2) yes C7 H7B O1 2_565 .99(3) 2.49(3) 3.462(3) 168(2) yes C9 H9A O1 2_665 .98(3) 2.56(3) 3.452(3) 151(2) yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion O2 N1 C1 C2 .2(3) O1 N1 C1 C2 -179.2(2) O2 N1 C1 C6 -178.7(2) O1 N1 C1 C6 1.9(3) C6 C1 C2 C3 -.6(4) N1 C1 C2 C3 -179.5(2) C1 C2 C3 C4 -.1(4) C1 C2 C3 N2 179.5(2) O3 N2 C3 C2 -2.5(4) O4 N2 C3 C2 177.3(2) O3 N2 C3 C4 177.1(2) O4 N2 C3 C4 -3.1(4) C2 C3 C4 O5 -179.5(2) N2 C3 C4 O5 .9(4) C2 C3 C4 C5 .7(4) N2 C3 C4 C5 -178.9(2) O5 C4 C5 C6 179.4(2) C3 C4 C5 C6 -.7(4) C4 C5 C6 C1 .1(4) C2 C1 C6 C5 .6(4) N1 C1 C6 C5 179.5(2) C8 N5 C7 N3 -59.0(3) C8A N5 C7 N3 58.8(3) C9A N3 C7 N5 -59.4(3) C9 N3 C7 N5 58.7(3) C9 N4 C8 N5 -60.5(3) C10 N4 C8 N5 57.6(3) C7 N5 C8 N4 60.6(3) C8A N5 C8 N4 -57.5(3) C9A N4A C8A N5 60.4(3) C10 N4A C8A N5 -58.9(3) C7 N5 C8A N4A -59.9(3) C8 N5 C8A N4A 58.1(3) C8 N4 C9 N3 58.9(3) C10 N4 C9 N3 -59.5(3) C9A N3 C9 N4 59.0(3) C7 N3 C9 N4 -58.5(3) C8A N4A C9A N3 -59.8(3) C10 N4A C9A N3 58.8(3) C9 N3 C9A N4A -58.2(3) C7 N3 C9A N4A 59.6(3) C9A N4A C10 N4 -60.7(3) C8A N4A C10 N4 58.4(3) C9 N4 C10 N4A 60.7(3) C8 N4 C10 N4A -57.8(3)