#------------------------------------------------------------------------------ #$Date: 2013-08-29 18:37:19 +0300 (Thu, 29 Aug 2013) $ #$Revision: 88064 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/01/27/2012715.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2012715 loop_ _publ_author_name 'Aragoni, M. Carla' 'Arca, Massimiliano' 'Blake, Alexander J.' 'Lippolis, Vito' 'Schr\"oder, Martin' 'Wilson, Claire' _publ_section_title ; 4-Methoxyphenylphosphonic acid: reactivity of Lawesson's reagent ; _journal_issue 5 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first o260 _journal_page_last o262 _journal_volume 58 _journal_year 2002 _chemical_formula_iupac 'C7 H9 O4 P' _chemical_formula_moiety 'C7 H9 O4 P' _chemical_formula_sum 'C7 H9 O4 P' _chemical_formula_weight 188.11 _chemical_name_systematic ; ? ; _space_group_IT_number 19 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'P 2ac 2ab' _symmetry_space_group_name_H-M 'P 21 21 21' _atom_sites_solution_hydrogens 'see text' _atom_sites_solution_primary direct _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 4.5819(6) _cell_length_b 10.0867(13) _cell_length_c 18.087(2) _cell_measurement_reflns_used 1415 _cell_measurement_temperature 150(2) _cell_measurement_theta_max 26.4 _cell_measurement_theta_min 2.3 _cell_volume 835.91(18) _computing_cell_refinement 'SAINT (Bruker, 1998)' _computing_data_collection 'SMART (Bruker, 1998)' _computing_data_reduction 'SAINT and SHELXTL (Bruker, 1997)' _computing_molecular_graphics SHELXTL _computing_publication_material 'SHELXL97 and PLATON (Spek, 2001)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1990)' _diffrn_ambient_temperature 150(2) _diffrn_measured_fraction_theta_full 0.995 _diffrn_measured_fraction_theta_max 0.926 _diffrn_measurement_device_type 'Bruker SMART1000 CCD area-detector' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'normal-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.090 _diffrn_reflns_av_sigmaI/netI 0.069 _diffrn_reflns_limit_h_max 6 _diffrn_reflns_limit_h_min -5 _diffrn_reflns_limit_k_max 13 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 22 _diffrn_reflns_limit_l_min -24 _diffrn_reflns_number 5423 _diffrn_reflns_theta_full 27.50 _diffrn_reflns_theta_max 28.82 _diffrn_reflns_theta_min 2.25 _diffrn_standards_decay_% none _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.300 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.495 _exptl_crystal_density_method 'not measured' _exptl_crystal_description lath _exptl_crystal_F_000 392 _exptl_crystal_size_max 0.31 _exptl_crystal_size_mid 0.07 _exptl_crystal_size_min 0.04 _refine_diff_density_max 0.30 _refine_diff_density_min -0.31 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 0.939 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 112 _refine_ls_number_reflns 1210 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 0.939 _refine_ls_R_factor_all 0.0616 _refine_ls_R_factor_gt 0.0416 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.050P)^2^] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0881 _refine_ls_wR_factor_ref 0.0942 _reflns_number_gt 939 _reflns_number_total 1210 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file na1560.cif _[local]_cod_data_source_block II _cod_depositor_comments ; The following automatic conversions were performed: '_geom_bond_publ_flag' value 'Yes' changed to 'yes' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (4 times). Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_geom_bond_publ_flag' value 'Yes' changed to 'yes' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (4 times). '_geom_angle_publ_flag' value 'Yes' changed to 'yes' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (6 times). '_geom_torsion_publ_flag' value 'Y' changed to 'y' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (2 times). '_geom_hbond_publ_flag' value 'Yes' changed to 'yes' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (2 times). '_geom_hbond_publ_flag' value 'No' changed to 'no' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2012715 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' '-x, y+1/2, -z+1/2' 'x+1/2, -y+1/2, -z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol P 0.09220(18) 0.68568(9) 0.89583(4) 0.0233(2) Uani d . 1 . . P O1 0.3532(5) 0.6510(2) 0.94311(10) 0.0296(6) Uani d . 1 . . O O2 -0.0425(5) 0.8220(2) 0.91755(11) 0.0296(6) Uani d . 1 . . O H2O -0.0879 0.8211 0.9625 0.044 Uiso calc R 1 . . H O3 -0.1416(5) 0.5749(2) 0.90187(13) 0.0293(5) Uani d . 1 . . O H3O -0.3037 0.6089 0.9125 0.044 Uiso calc R 1 . . H C1 0.1925(7) 0.6997(3) 0.80158(16) 0.0232(7) Uani d . 1 . . C C2 0.0942(8) 0.6082(3) 0.74983(16) 0.0289(7) Uani d . 1 . . C H2 -0.0402 0.5415 0.7645 0.035 Uiso calc R 1 . . H C3 0.1895(7) 0.6131(3) 0.67714(17) 0.0299(8) Uani d . 1 . . C H3 0.1227 0.5494 0.6423 0.036 Uiso calc R 1 . . H C4 0.3823(8) 0.7111(3) 0.65571(16) 0.0302(8) Uani d . 1 . . C C5 0.4766(8) 0.8056(4) 0.70600(17) 0.0331(8) Uani d . 1 . . C H5 0.6043 0.8744 0.6906 0.040 Uiso calc R 1 . . H C6 0.3847(8) 0.7994(3) 0.77833(16) 0.0289(7) Uani d . 1 . . C H6 0.4524 0.8633 0.8129 0.035 Uiso calc R 1 . . H O4 0.4929(6) 0.7233(2) 0.58565(12) 0.0422(7) Uani d . 1 . . O C4M 0.4369(11) 0.6186(4) 0.53464(18) 0.0474(11) Uani d . 1 . . C H4M1 0.5051 0.5345 0.5556 0.071 Uiso calc R 1 . . H H4M2 0.5403 0.6361 0.4882 0.071 Uiso calc R 1 . . H H4M3 0.2267 0.6131 0.5250 0.071 Uiso calc R 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 P 0.0189(4) 0.0278(4) 0.0233(4) 0.0005(4) 0.0001(4) 0.0006(4) O1 0.0193(12) 0.0454(15) 0.0240(11) 0.0022(10) -0.0021(9) 0.0016(10) O2 0.0314(13) 0.0345(13) 0.0227(10) 0.0034(12) 0.0042(9) -0.0028(10) O3 0.0182(12) 0.0324(12) 0.0374(12) 0.0004(10) 0.0026(11) 0.0027(12) C1 0.0181(15) 0.0265(17) 0.0251(14) 0.0050(15) -0.0017(12) -0.0010(15) C2 0.0246(17) 0.0311(18) 0.0310(17) -0.0025(17) -0.0012(16) -0.0011(14) C3 0.0347(19) 0.0303(19) 0.0246(16) 0.0002(17) -0.0046(14) -0.0068(15) C4 0.0367(19) 0.0341(19) 0.0197(14) 0.0073(17) -0.0009(14) 0.0049(14) C5 0.040(2) 0.0312(18) 0.0275(16) -0.0066(18) -0.0008(14) 0.0049(16) C6 0.0317(18) 0.0309(18) 0.0241(15) -0.0037(19) -0.0021(14) -0.0046(14) O4 0.0628(18) 0.0394(15) 0.0242(12) -0.0062(13) 0.0088(11) -0.0036(10) C4M 0.076(3) 0.042(2) 0.0245(16) -0.001(2) 0.009(2) -0.0067(16) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag P O1 . 1.511(2) yes P O2 . 1.557(2) yes P O3 . 1.552(2) yes P C1 . 1.771(3) yes O2 H2O . 0.84 ? O3 H3O . 0.84 ? C1 C2 . 1.390(4) ? C1 C6 . 1.401(5) ? C2 C3 . 1.386(4) ? C2 H2 . 0.95 ? C3 C4 . 1.382(5) ? C3 H3 . 0.95 ? C4 O4 . 1.370(4) ? C4 C5 . 1.387(5) ? C5 C6 . 1.376(4) ? C5 H5 . 0.95 ? C6 H6 . 0.95 ? O4 C4M . 1.426(4) ? C4M H4M1 . 0.98 ? C4M H4M2 . 0.98 ? C4M H4M3 . 0.98 ? loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' P P 0.1023 0.0942 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag O1 P O2 112.03(13) yes O1 P O3 109.88(13) yes O2 P O3 110.12(12) yes O1 P C1 110.97(14) yes O2 P C1 105.96(14) yes O3 P C1 107.73(15) yes P O2 H2O 109.5 ? P O3 H3O 109.5 ? C2 C1 C6 118.6(3) ? C2 C1 P 120.7(3) ? C6 C1 P 120.6(2) ? C3 C2 C1 120.9(3) ? C3 C2 H2 119.6 ? C1 C2 H2 119.6 ? C4 C3 C2 119.5(3) ? C4 C3 H3 120.2 ? C2 C3 H3 120.2 ? O4 C4 C3 124.1(3) ? O4 C4 C5 115.4(3) ? C3 C4 C5 120.5(3) ? C6 C5 C4 119.8(3) ? C6 C5 H5 120.1 ? C4 C5 H5 120.1 ? C5 C6 C1 120.7(3) ? C5 C6 H6 119.6 ? C1 C6 H6 119.6 ? C4 O4 C4M 117.7(3) ? O4 C4M H4M1 109.5 ? O4 C4M H4M2 109.5 ? H4M1 C4M H4M2 109.5 ? O4 C4M H4M3 109.5 ? H4M1 C4M H4M3 109.5 ? H4M2 C4M H4M3 109.5 ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag O2 H2O O1 4_467 0.84 1.75 2.580(3) 169 yes O3 H3O O1 1_455 0.84 1.72 2.550(3) 169 yes C3 H3 O2 3_546 0.95 2.56 3.465(4) 159 no loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag O1 P C1 C2 112.0(3) ? O3 P C1 C2 -8.3(3) ? O2 P C1 C2 -126.1(3) ? O1 P C1 C6 -64.7(3) ? O3 P C1 C6 175.0(2) ? O2 P C1 C6 57.2(3) ? C6 C1 C2 C3 1.6(5) ? P C1 C2 C3 -175.1(3) ? C1 C2 C3 C4 -0.7(5) ? C2 C3 C4 O4 179.0(3) ? C2 C3 C4 C5 -1.1(5) ? O4 C4 C5 C6 -178.0(3) ? C3 C4 C5 C6 2.0(5) ? C4 C5 C6 C1 -1.1(5) ? C2 C1 C6 C5 -0.7(5) ? P C1 C6 C5 176.1(3) ? C3 C4 O4 C4M -8.8(5) y C5 C4 O4 C4M 171.2(3) y _cod_database_fobs_code 2012715