#------------------------------------------------------------------------------ #$Date: 2009-11-14 15:09:05 +0200 (Sat, 14 Nov 2009) $ #$Revision: 846 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/2101929.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2101929 _journal_name_full 'Acta Crystallographica, Section B' _journal_volume 53 loop_ _publ_author_name 'Zaderenko, Paula' 'Gil, Ma. Soledad' 'L\'opez, Pilar' 'Ballesteros, Paloma' 'Fonseca, Isabel' 'Albert, Armando' _publ_section_title ; Diethyl 2-Benzimidazol-1-ylsuccinate - Picric Acid. An Inclusion Molecular Complex. ; _journal_issue DEC97 _journal_page_first 961 _journal_page_last 967 _journal_year 1997 _chemical_formula_moiety 'C15 H18 N2 O4 , C6 H3 N3 O7 ' _chemical_formula_sum 'C21 H21 N5 O11' _chemical_formula_weight 519.43 _chemical_name_systematic ; ? ; _symmetry_cell_setting orthorhombic _symmetry_space_group_name_H-M 'P n a 21' _audit_creation_method SHELXL _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 11.3100(10) _cell_length_b 23.183(4) _cell_length_c 9.4620(10) _cell_measurement_reflns_used 53 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 25 _cell_measurement_theta_min 3 _cell_volume 2480.9(5) _computing_cell_refinement 'LSUCRE (Appleman, unpublished, 1996)' _computing_data_collection 'Philips PW1100' _computing_data_reduction 'XRAY80 System (Stewart, Kundell & Baldwin, 1980)' _computing_molecular_graphics 'XTAL3.0 (Hall & Stewart, 1990)' _computing_publication_material 'SHELXL-93 (Sheldrick, 1993)' _computing_structure_refinement 'SHELXL-93 (Sheldrick, 1993)' _computing_structure_solution 'SIR-92 (Altomare et al., 1992)' _diffrn_ambient_temperature 293(2) _diffrn_measurement_device 'Philips PW1100' _diffrn_measurement_method \w-2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type CuK\a _diffrn_radiation_wavelength 1.5418 _diffrn_reflns_av_sigmaI/netI 0.0197 _diffrn_reflns_limit_h_max 13 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 27 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 11 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 2241 _diffrn_reflns_theta_max 64.80 _diffrn_reflns_theta_min 4.35 _diffrn_standards_decay_% 0 _diffrn_standards_interval_time 90 _diffrn_standards_number 2 _exptl_absorpt_coefficient_mu 0.985 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.391 _exptl_crystal_density_meas 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 1080 _exptl_crystal_size_max 0.35 _exptl_crystal_size_mid 0.24 _exptl_crystal_size_min 0.21 _refine_diff_density_max 0.316 _refine_diff_density_min -0.224 _refine_ls_abs_structure_details 'Flack (1983)' _refine_ls_abs_structure_Flack 0.5(8) _refine_ls_extinction_method none _refine_ls_goodness_of_fit_all 1.135 _refine_ls_goodness_of_fit_obs 1.177 _refine_ls_hydrogen_treatment 'H atoms refined isotropically' _refine_ls_matrix_type full _refine_ls_number_parameters 334 _refine_ls_number_reflns 2241 _refine_ls_number_restraints 1 _refine_ls_restrained_S_all 1.134 _refine_ls_restrained_S_obs 1.176 _refine_ls_R_factor_all 0.1029 _refine_ls_R_factor_obs 0.0785 _refine_ls_shift/esd_max 0.000 _refine_ls_shift/esd_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_scheme 'w = 1/[\s^2^(Fo^2^)+(0.0844P)^2^+2.4124P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_wR_factor_all 0.2160 _refine_ls_wR_factor_obs 0.1889 _reflns_number_observed 1683 _reflns_number_total 2241 _reflns_observed_criterion >2sigma(I) _[local]_cod_data_source_file bm0007.cif loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, z+1/2' 'x+1/2, -y+1/2, z' '-x+1/2, y+1/2, z+1/2' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' C C 0.0181 0.0091 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0311 0.0180 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0492 0.0322 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol N1 0.3805(5) 0.1876(2) 0.2515(7) 0.067(2) Uani d . 1 N C2 0.4632(6) 0.1737(4) 0.1549(10) 0.081(2) Uani d . 1 C H2 0.4914(6) 0.1366(4) 0.1392(10) 0.098 Uiso calc R 1 H N3 0.4984(5) 0.2199(3) 0.0859(8) 0.075(2) Uani d . 1 N C3A 0.4368(6) 0.2667(3) 0.1362(8) 0.064(2) Uani d . 1 C C4 0.4405(7) 0.3243(4) 0.1026(10) 0.080(2) Uani d . 1 C H4 0.4912(7) 0.3383(4) 0.0332(10) 0.096 Uiso calc R 1 H C5 0.3664(9) 0.3602(4) 0.1753(13) 0.097(3) Uani d . 1 C H5 0.3666(9) 0.3994(4) 0.1540(13) 0.116 Uiso calc R 1 H C6 0.2905(8) 0.3399(4) 0.2808(13) 0.092(3) Uani d . 1 C H6 0.2429(8) 0.3661(4) 0.3290(13) 0.111 Uiso calc R 1 H C7 0.2845(6) 0.2830(3) 0.3149(10) 0.071(2) Uani d . 1 C H7 0.2315(6) 0.2694(3) 0.3822(10) 0.086 Uiso calc R 1 H C7A 0.3614(6) 0.2461(3) 0.2444(8) 0.060(2) Uani d . 1 C C8 0.3217(6) 0.1469(3) 0.3491(8) 0.067(2) Uani d . 1 C H8 0.2910(6) 0.1704(3) 0.4269(8) 0.081 Uiso calc R 1 H C9 0.4130(7) 0.1063(3) 0.4155(9) 0.071(2) Uani d . 1 C O10 0.3597(5) 0.0636(2) 0.4778(7) 0.078(2) Uani d . 1 O O11 0.5177(5) 0.1150(3) 0.4116(9) 0.107(2) Uani d . 1 O C12 0.4322(8) 0.0236(4) 0.5540(13) 0.096(3) Uani d . 1 C H12A 0.4914(8) 0.0441(4) 0.6086(13) 0.115 Uiso calc R 1 H H12B 0.4724(8) -0.0020(4) 0.4888(13) 0.115 Uiso calc R 1 H C13 0.3553(11) -0.0093(5) 0.6477(17) 0.135(5) Uani d . 1 C H13A 0.4017(11) -0.0366(5) 0.7002(17) 0.203 Uiso calc R 1 H H13B 0.2973(11) -0.0296(5) 0.5926(17) 0.203 Uiso calc R 1 H H13C 0.3162(11) 0.0164(5) 0.7119(17) 0.203 Uiso calc R 1 H C14 0.2145(6) 0.1183(3) 0.2821(9) 0.068(2) Uani d . 1 C H14A 0.1683(6) 0.0997(3) 0.3556(9) 0.082 Uiso calc R 1 H H14B 0.1654(6) 0.1478(3) 0.2392(9) 0.082 Uiso calc R 1 H C15 0.2458(8) 0.0742(3) 0.1719(10) 0.077(2) Uani d . 1 C O16 0.3450(5) 0.0584(3) 0.1428(8) 0.093(2) Uani d . 1 O O17 0.1485(5) 0.0544(3) 0.1104(8) 0.092(2) Uani d . 1 O C18 0.1642(12) 0.0135(5) -0.0073(14) 0.126(4) Uani d . 1 C H18A 0.2196(12) 0.0289(5) -0.0758(14) 0.151 Uiso calc R 1 H H18B 0.1951(12) -0.0229(5) 0.0277(14) 0.151 Uiso calc R 1 H C19 0.0503(14) 0.0046(9) -0.072(3) 0.219(10) Uani d . 1 C H19A 0.0581(14) -0.0220(9) -0.150(3) 0.329 Uiso calc R 1 H H19B 0.0207(14) 0.0407(9) -0.107(3) 0.329 Uiso calc R 1 H H19C -0.0038(14) -0.0108(9) -0.004(3) 0.329 Uiso calc R 1 H C30 0.7343(7) 0.2293(4) -0.1756(9) 0.077(2) Uani d . 1 C O31 0.6424(6) 0.2454(3) -0.1127(9) 0.119(3) Uani d . 1 O H31 0.6032(6) 0.2172(3) -0.0901(9) 0.179 Uiso calc R 1 H C32 0.8189(8) 0.2693(4) -0.2270(10) 0.078(2) Uani d . 1 C N33 0.8015(9) 0.3293(5) -0.1937(12) 0.113(3) Uani d . 1 N O34 0.7640(12) 0.3424(5) -0.0828(16) 0.182(5) Uani d . 1 O O35 0.8283(17) 0.3646(5) -0.2773(17) 0.251(8) Uani d . 1 O C36 0.9142(8) 0.2550(5) -0.3086(10) 0.091(3) Uani d . 1 C H36 0.9645(8) 0.2834(5) -0.3433(10) 0.109 Uiso calc R 1 H C37 0.9338(8) 0.1989(5) -0.3379(11) 0.095(3) Uani d . 1 C N38 1.0375(9) 0.1848(8) -0.4251(14) 0.149(5) Uani d . 1 N O39 1.0977(8) 0.2213(6) -0.4701(12) 0.190(6) Uani d . 1 O O40 1.0544(11) 0.1308(7) -0.4420(16) 0.216(7) Uani d . 1 O C41 0.8596(8) 0.1575(5) -0.2951(11) 0.098(3) Uani d . 1 C H41 0.8738(8) 0.1193(5) -0.3199(11) 0.118 Uiso calc R 1 H C42 0.7626(7) 0.1712(4) -0.2149(10) 0.080(2) Uani d . 1 C N43 0.6905(9) 0.1237(4) -0.1679(12) 0.121(3) Uani d . 1 N O44 0.7135(11) 0.0752(4) -0.2028(18) 0.224(7) Uani d . 1 O O45 0.6048(9) 0.1325(4) -0.0927(13) 0.171(5) Uani d . 1 O loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 N1 0.059(3) 0.066(3) 0.077(4) 0.007(3) 0.029(3) 0.008(3) C2 0.066(4) 0.086(5) 0.092(6) 0.013(4) 0.029(5) 0.003(5) N3 0.061(3) 0.081(4) 0.083(4) 0.006(3) 0.023(3) 0.017(4) C3A 0.046(3) 0.079(4) 0.067(5) -0.004(3) 0.008(3) 0.007(4) C4 0.064(4) 0.087(5) 0.088(6) -0.012(4) 0.001(5) 0.023(5) C5 0.095(6) 0.064(5) 0.130(9) 0.001(4) 0.001(7) 0.011(6) C6 0.084(6) 0.075(5) 0.118(8) 0.009(4) 0.016(6) 0.009(6) C7 0.060(4) 0.076(5) 0.078(5) 0.006(3) 0.009(4) 0.004(4) C7A 0.054(4) 0.066(4) 0.059(4) 0.001(3) 0.004(3) 0.000(3) C8 0.066(4) 0.075(4) 0.060(4) -0.004(4) 0.017(4) 0.013(4) C9 0.064(4) 0.076(4) 0.073(5) 0.005(4) 0.013(4) 0.007(4) O10 0.067(3) 0.077(3) 0.091(4) -0.001(3) 0.005(3) 0.026(3) O11 0.060(3) 0.128(5) 0.133(6) -0.003(3) 0.006(4) 0.038(5) C12 0.092(6) 0.083(5) 0.113(8) 0.019(5) 0.000(6) 0.029(5) C13 0.149(10) 0.116(8) 0.142(11) 0.022(7) 0.029(10) 0.054(8) C14 0.050(3) 0.082(4) 0.072(5) 0.003(3) 0.016(4) 0.002(4) C15 0.090(5) 0.066(4) 0.075(5) 0.009(4) 0.027(5) 0.011(4) O16 0.085(4) 0.091(4) 0.102(5) 0.022(3) 0.030(4) 0.001(4) O17 0.087(4) 0.084(4) 0.105(5) -0.003(3) 0.010(4) -0.019(4) C18 0.155(10) 0.111(8) 0.112(9) -0.007(8) 0.012(9) -0.043(7) C19 0.188(17) 0.231(18) 0.24(2) -0.022(15) -0.041(16) -0.133(18) C30 0.070(5) 0.104(6) 0.057(4) 0.010(4) 0.018(4) 0.006(4) O31 0.109(5) 0.114(5) 0.135(6) 0.024(4) 0.075(5) 0.029(5) C32 0.082(5) 0.077(5) 0.076(5) -0.003(4) 0.009(5) 0.003(4) N33 0.127(7) 0.116(7) 0.095(6) -0.010(6) 0.030(6) 0.006(6) O34 0.223(12) 0.140(8) 0.184(11) 0.006(8) 0.056(10) -0.055(9) O35 0.42(2) 0.114(7) 0.215(14) -0.010(10) 0.115(16) 0.049(9) C36 0.068(5) 0.138(8) 0.067(5) -0.018(5) 0.015(4) 0.009(6) C37 0.064(5) 0.149(9) 0.071(5) 0.003(6) 0.032(4) -0.024(6) N38 0.087(6) 0.224(14) 0.137(10) 0.023(8) 0.048(7) -0.031(10) O39 0.111(6) 0.306(15) 0.152(9) -0.029(8) 0.093(7) 0.005(9) O40 0.181(10) 0.229(12) 0.238(15) 0.030(9) 0.141(10) -0.039(11) C41 0.078(6) 0.133(8) 0.084(6) 0.003(6) 0.020(5) -0.023(6) C42 0.072(5) 0.093(5) 0.074(5) -0.010(4) 0.015(4) 0.008(5) N43 0.126(7) 0.109(7) 0.129(8) -0.013(6) 0.052(7) -0.009(6) O44 0.277(13) 0.102(6) 0.295(16) -0.032(7) 0.174(13) -0.058(9) O45 0.166(7) 0.116(6) 0.231(12) -0.034(5) 0.129(9) -0.019(7) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag N1 C2 1.347(9) yes N1 C7A 1.375(9) yes N1 C8 1.478(9) ? C2 N3 1.316(10) yes N3 C3A 1.376(9) yes C3A C4 1.373(10) ? C3A C7A 1.415(10) yes C4 C5 1.367(13) ? C5 C6 1.398(14) ? C6 C7 1.361(11) ? C7 C7A 1.391(10) ? C8 C14 1.521(10) ? C8 C9 1.531(11) ? C9 O11 1.202(9) ? C9 O10 1.300(9) ? O10 C12 1.433(10) yes C12 C13 1.458(15) yes C14 C15 1.501(11) ? C15 O16 1.212(9) ? C15 O17 1.327(10) ? O17 C18 1.474(12) yes C18 C19 1.44(2) yes C30 O31 1.255(9) ? C30 C32 1.419(11) ? C30 C42 1.432(13) ? C32 C36 1.367(12) ? C32 N33 1.440(13) yes N33 O34 1.171(15) yes N33 O35 1.179(13) yes C36 C37 1.348(13) ? C37 C41 1.338(14) ? C37 N38 1.471(12) yes N38 O39 1.17(2) yes N38 O40 1.28(2) yes C41 C42 1.371(12) ? C42 N43 1.441(12) yes N43 O44 1.202(11) yes N43 O45 1.220(11) yes loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C2 N1 C7A 108.1(6) yes C2 N1 C8 125.7(6) ? C7A N1 C8 126.2(6) ? N3 C2 N1 110.7(7) yes C2 N3 C3A 108.5(6) yes C4 C3A N3 132.2(7) ? C4 C3A C7A 121.0(7) ? N3 C3A C7A 106.8(6) yes C5 C4 C3A 117.2(8) ? C4 C5 C6 122.1(8) ? C7 C6 C5 121.7(9) ? C6 C7 C7A 116.9(8) ? N1 C7A C7 132.9(7) ? N1 C7A C3A 106.0(6) yes C7 C7A C3A 121.0(7) ? N1 C8 C14 112.1(6) ? N1 C8 C9 110.2(6) ? C14 C8 C9 116.2(6) ? O11 C9 O10 126.7(8) ? O11 C9 C8 123.3(7) ? O10 C9 C8 109.9(6) ? C9 O10 C12 117.1(6) ? O10 C12 C13 107.7(8) ? C15 C14 C8 113.4(6) ? O16 C15 O17 124.3(8) ? O16 C15 C14 125.6(9) ? O17 C15 C14 110.1(7) ? C15 O17 C18 117.0(8) ? C19 C18 O17 107.9(11) ? O31 C30 C32 121.7(8) ? O31 C30 C42 126.1(8) ? C32 C30 C42 112.0(7) ? C36 C32 C30 124.6(8) ? C36 C32 N33 117.7(8) ? C30 C32 N33 117.7(8) ? O34 N33 O35 121.0(13) yes O34 N33 C32 119.7(11) ? O35 N33 C32 119.3(11) ? C37 C36 C32 118.6(8) ? C41 C37 C36 121.8(8) ? C41 C37 N38 120.7(12) ? C36 C37 N38 117.4(11) ? O39 N38 O40 125.3(11) yes O39 N38 C37 120.6(15) ? O40 N38 C37 114.0(13) ? C37 C41 C42 120.1(10) ? C41 C42 C30 122.8(8) ? C41 C42 N43 116.5(9) ? C30 C42 N43 120.7(8) ? O44 N43 O45 119.2(10) yes O44 N43 C42 120.5(10) ? O45 N43 C42 120.2(10) ? loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C7A N1 C2 N3 0.0(9) C8 N1 C2 N3 -179.4(7) N1 C2 N3 C3A -0.6(10) C2 N3 C3A C4 179.0(9) C2 N3 C3A C7A 1.0(9) N3 C3A C4 C5 -179.3(9) C7A C3A C4 C5 -1.6(13) C3A C4 C5 C6 0.6(15) C4 C5 C6 C7 -1.3(16) C5 C6 C7 C7A 2.9(14) C2 N1 C7A C7 177.6(9) C8 N1 C7A C7 -3.0(13) C2 N1 C7A C3A 0.6(8) C8 N1 C7A C3A -180.0(7) C6 C7 C7A N1 179.6(9) C6 C7 C7A C3A -3.8(12) C4 C3A C7A N1 -179.3(7) N3 C3A C7A N1 -1.0(8) C4 C3A C7A C7 3.3(12) N3 C3A C7A C7 -178.4(7) C2 N1 C8 C14 -86.0(9) C7A N1 C8 C14 94.8(8) C2 N1 C8 C9 45.1(10) C7A N1 C8 C9 -134.2(8) N1 C8 C9 O11 14.7(12) C14 C8 C9 O11 143.7(9) N1 C8 C9 O10 -167.1(7) C14 C8 C9 O10 -38.2(9) O11 C9 O10 C12 2.2(14) C8 C9 O10 C12 -175.8(8) C9 O10 C12 C13 163.4(9) N1 C8 C14 C15 72.5(8) C9 C8 C14 C15 -55.5(9) C8 C14 C15 O16 5.3(12) C8 C14 C15 O17 -175.1(7) O16 C15 O17 C18 -4.3(13) C14 C15 O17 C18 176.1(8) C15 O17 C18 C19 -171.1(13) O31 C30 C32 C36 -173.0(10) C42 C30 C32 C36 2.2(12) O31 C30 C32 N33 5.4(14) C42 C30 C32 N33 -179.4(8) C36 C32 N33 O34 -144.2(14) C30 C32 N33 O34 37.3(17) C36 C32 N33 O35 33.7(17) C30 C32 N33 O35 -144.8(15) C30 C32 C36 C37 -3.3(14) N33 C32 C36 C37 178.3(10) C32 C36 C37 C41 3.3(16) C32 C36 C37 N38 -179.6(9) C41 C37 N38 O39 174.9(13) C36 C37 N38 O39 -2.2(19) C41 C37 N38 O40 -6.6(19) C36 C37 N38 O40 176.3(13) C36 C37 C41 C42 -2.4(16) N38 C37 C41 C42 -179.4(10) C37 C41 C42 C30 1.3(15) C37 C41 C42 N43 -177.1(10) O31 C30 C42 C41 173.8(10) C32 C30 C42 C41 -1.1(13) O31 C30 C42 N43 -7.8(15) C32 C30 C42 N43 177.3(9) C41 C42 N43 O44 -2.6(19) C30 C42 N43 O44 178.9(13) C41 C42 N43 O45 177.9(12) C30 C42 N43 O45 -0.6(17)