#------------------------------------------------------------------------------ #$Date: 2008-01-14 00:15:36 +0200 (Mon, 14 Jan 2008) $ #$Revision: 14 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/2203355.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_2203355 loop_ _publ_author_name 'Wu, Hai-Qiang' 'Zhou, Jin-Lin' 'Huang, Zhi-Shu' 'Gu, Lian-Quan' 'Ng, Seik Weng' _publ_section_title ; 3-[2-(N,N-Diethylamino)glyoxyloyl]-1H-indol-4-yl acetate monohydrate ; _journal_issue 3 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first o337 _journal_page_last o338 _journal_volume 60 _journal_year 2004 _chemical_formula_iupac 'C16 H18 N2 O4, H2 O' _chemical_formula_moiety 'C16 H18 N2 O4, H2 O' _chemical_formula_sum 'C16 H20 N2 O5' _chemical_formula_weight 320.34 _chemical_melting_point ? _chemical_name_common ? _chemical_name_systematic ; 3-[2-(N,N-Diethylamino)glyoxyloyl]-1H-indol-4-yl acetate monohydrate ; _symmetry_cell_setting Monoclinic _symmetry_space_group_name_Hall '-P 2yab' _symmetry_space_group_name_H-M 'P 21/a' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL97 _cell_angle_alpha 90 _cell_angle_beta 98.703(2) _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 12.646(2) _cell_length_b 10.5180(10) _cell_length_c 12.904(2) _cell_measurement_reflns_used 931 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 26.8 _cell_measurement_theta_min 2.5 _cell_volume 1696.7(4) _computing_cell_refinement SMART _computing_data_collection 'SMART (Bruker, 1999)' _computing_data_reduction 'SAINT (Bruker, 1999)' _computing_molecular_graphics 'ORTEP-II (Johnson, 1976)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 293(2) _diffrn_detector_area_resol_mean ? _diffrn_measured_fraction_theta_full 0.99 _diffrn_measured_fraction_theta_max 0.99 _diffrn_measurement_device_type 'Bruker SMART CCD area-detector' _diffrn_measurement_method '\f and \w' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'normal-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.012 _diffrn_reflns_av_sigmaI/netI 0.014 _diffrn_reflns_limit_h_max 16 _diffrn_reflns_limit_h_min -16 _diffrn_reflns_limit_k_max 13 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 16 _diffrn_reflns_limit_l_min -10 _diffrn_reflns_number 9454 _diffrn_reflns_theta_full 27.0 _diffrn_reflns_theta_max 27.0 _diffrn_reflns_theta_min 2.5 _diffrn_standards_decay_% 0 _diffrn_standards_interval_count ? _diffrn_standards_interval_time 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.094 _exptl_absorpt_correction_T_max ? _exptl_absorpt_correction_T_min ? _exptl_absorpt_correction_type none _exptl_absorpt_process_details ? _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.254 _exptl_crystal_density_meas 'not measured' _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 680 _exptl_crystal_size_max 0.50 _exptl_crystal_size_mid 0.38 _exptl_crystal_size_min 0.36 _refine_diff_density_max 0.30 _refine_diff_density_min -0.17 _refine_ls_extinction_coef ? _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.019 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 221 _refine_ls_number_reflns 3695 _refine_ls_number_restraints 3 _refine_ls_restrained_S_all 1.019 _refine_ls_R_factor_all 0.0526 _refine_ls_R_factor_gt 0.0404 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean <0.001 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0694P)^2^+0.3054P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1164 _refine_ls_wR_factor_ref 0.1279 _reflns_number_gt 2880 _reflns_number_total 3695 _reflns_threshold_expression I>2\s(I) loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' 'x+1/2, -y+1/2, z' '-x, -y, -z' '-x-1/2, y-1/2, -z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol O1 0.26650(10) 0.44090(10) 0.13670(10) 0.0527(3) Uani d . 1 . . O O2 0.43820(10) 0.4820(2) 0.12480(10) 0.0725(4) Uani d . 1 . . O O3 0.28480(10) 0.71450(10) 0.14120(10) 0.0566(3) Uani d . 1 . . O O4 0.30460(10) 0.94700(10) 0.29260(10) 0.0594(3) Uani d . 1 . . O O1W 0.40430(10) 0.5287(2) 0.69340(10) 0.0906(5) Uani d D 1 . . O N1 0.37760(10) 0.57930(10) 0.48250(10) 0.0504(3) Uani d D 1 . . N N2 0.45930(10) 0.90520(10) 0.23130(10) 0.0534(3) Uani d . 1 . . N C1 0.3058(2) 0.5067(2) -0.02730(10) 0.0705(5) Uani d . 1 . . C C2 0.34640(10) 0.4771(2) 0.08430(10) 0.0541(4) Uani d . 1 . . C C3 0.29430(10) 0.41440(10) 0.24390(10) 0.0465(3) Uani d . 1 . . C C4 0.28610(10) 0.2909(2) 0.27580(10) 0.0590(4) Uani d . 1 . . C C5 0.30880(10) 0.2578(2) 0.38140(10) 0.0630(4) Uani d . 1 . . C C6 0.34030(10) 0.3477(2) 0.45660(10) 0.0570(4) Uani d . 1 . . C C7 0.34760(10) 0.47270(10) 0.42300(10) 0.0453(3) Uani d . 1 . . C C8 0.32410(10) 0.51080(10) 0.31720(10) 0.0407(3) Uani d . 1 . . C C9 0.34080(10) 0.64700(10) 0.31640(10) 0.0408(3) Uani d . 1 . . C C10 0.37370(10) 0.68120(10) 0.41980(10) 0.0475(3) Uani d . 1 . . C C11 0.32740(10) 0.73650(10) 0.23110(10) 0.0415(3) Uani d . 1 . . C C12 0.36480(10) 0.87270(10) 0.25560(10) 0.0435(3) Uani d . 1 . . C C13 0.52900(10) 0.8154(2) 0.1867(2) 0.0646(4) Uani d . 1 . . C C14 0.5200(2) 0.8246(2) 0.0695(2) 0.0863(6) Uani d . 1 . . C C15 0.4968(2) 1.0366(2) 0.2478(2) 0.0752(5) Uani d . 1 . . C C16 0.5466(2) 1.0606(3) 0.3574(2) 0.1068(9) Uani d . 1 . . C H1W1 0.4540(10) 0.528(2) 0.7460(10) 0.096(7) Uiso d D 1 . . H H1W2 0.3470(10) 0.497(2) 0.708(2) 0.105(8) Uiso d D 1 . . H H1N 0.395(2) 0.578(2) 0.5500(10) 0.069(5) Uiso d D 1 . . H H1A 0.3633 0.5382 -0.0607 0.106 Uiso calc R 1 . . H H1B 0.2507 0.5700 -0.0308 0.106 Uiso calc R 1 . . H H1C 0.2770 0.4309 -0.0623 0.106 Uiso calc R 1 . . H H4 0.2649 0.2282 0.2262 0.071 Uiso calc R 1 . . H H5 0.3025 0.1734 0.4011 0.076 Uiso calc R 1 . . H H6 0.3562 0.3260 0.5271 0.068 Uiso calc R 1 . . H H10 0.3908 0.7636 0.4425 0.057 Uiso calc R 1 . . H H13A 0.5110 0.7295 0.2053 0.078 Uiso calc R 1 . . H H13B 0.6026 0.8312 0.2176 0.078 Uiso calc R 1 . . H H14A 0.5668 0.7635 0.0448 0.129 Uiso calc R 1 . . H H14B 0.5398 0.9086 0.0505 0.129 Uiso calc R 1 . . H H14C 0.4476 0.8077 0.0382 0.129 Uiso calc R 1 . . H H15A 0.4368 1.0940 0.2297 0.090 Uiso calc R 1 . . H H15B 0.5486 1.0546 0.2014 0.090 Uiso calc R 1 . . H H16A 0.5703 1.1473 0.3644 0.160 Uiso calc R 1 . . H H16B 0.6067 1.0048 0.3753 0.160 Uiso calc R 1 . . H H16C 0.4951 1.0451 0.4035 0.160 Uiso calc R 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.0507(6) 0.0592(6) 0.0466(6) -0.0074(4) 0.0024(4) -0.0101(4) O2 0.0499(6) 0.1190(10) 0.0491(6) 0.0037(6) 0.0085(5) -0.0023(6) O3 0.0649(6) 0.0573(6) 0.0443(6) -0.0048(5) -0.0027(5) 0.0019(4) O4 0.0512(6) 0.0546(6) 0.0748(7) 0.0051(5) 0.0170(5) -0.0119(5) O1W 0.0534(7) 0.166(2) 0.0506(7) -0.0115(8) 0.0004(6) 0.0323(8) N1 0.0543(7) 0.0594(7) 0.0369(6) -0.0005(5) 0.0043(5) 0.0002(5) N2 0.0441(6) 0.0470(7) 0.0710(8) -0.0022(5) 0.0143(6) -0.0019(6) C1 0.0770(10) 0.0900(10) 0.0419(8) -0.0017(9) 0.0026(7) -0.0105(8) C2 0.0550(8) 0.0641(9) 0.0431(8) 0.0009(7) 0.0068(6) -0.0131(6) C3 0.0420(7) 0.0486(7) 0.0491(8) -0.0022(5) 0.0076(6) -0.0043(6) C4 0.0601(9) 0.0480(8) 0.0700(10) -0.0055(7) 0.0133(7) -0.0087(7) C5 0.0650(10) 0.0465(8) 0.0800(10) -0.0016(7) 0.0164(8) 0.0084(8) C6 0.0554(8) 0.0588(9) 0.0581(9) 0.0034(7) 0.0127(7) 0.0154(7) C7 0.0397(6) 0.0516(7) 0.0455(7) 0.0011(5) 0.0094(5) 0.0027(6) C8 0.0349(6) 0.0447(7) 0.0430(7) -0.0003(5) 0.0079(5) -0.0003(5) C9 0.0368(6) 0.0445(7) 0.0412(7) -0.0015(5) 0.0063(5) -0.0021(5) C10 0.0479(7) 0.0499(7) 0.0445(7) -0.0026(6) 0.0060(6) -0.0042(6) C11 0.0351(6) 0.0462(7) 0.0436(7) 0.0008(5) 0.0074(5) -0.0008(5) C12 0.0391(6) 0.0446(7) 0.0460(7) 0.0024(5) 0.0040(5) 0.0011(5) C13 0.0447(8) 0.0620(9) 0.0910(10) 0.0064(7) 0.0226(8) 0.0027(8) C14 0.0900(10) 0.0870(10) 0.091(2) 0.0080(10) 0.0400(10) -0.0040(10) C15 0.0690(10) 0.0610(10) 0.100(2) -0.0215(8) 0.0290(10) -0.0130(10) C16 0.085(2) 0.136(2) 0.104(2) -0.0440(10) 0.0270(10) -0.042(2) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag C2 O1 C3 . . 117.00(10) yes C7 N1 C10 . . 109.40(10) yes C12 N2 C13 . . 122.90(10) yes C12 N2 C15 . . 119.50(10) yes C13 N2 C15 . . 117.60(10) yes O1 C2 O2 . . 122.80(10) yes O1 C2 C1 . . 111.60(10) yes O2 C2 C1 . . 125.6(2) yes O1 C3 C4 . . 117.70(10) yes O1 C3 C8 . . 121.70(10) yes C4 C3 C8 . . 120.50(10) yes C3 C4 C5 . . 121.1(2) yes C4 C5 C6 . . 121.0(2) yes C5 C6 C7 . . 117.20(10) yes N1 C7 C6 . . 128.40(10) yes N1 C7 C8 . . 108.00(10) yes C6 C7 C8 . . 123.70(10) yes C3 C8 C7 . . 116.50(10) yes C3 C8 C9 . . 137.40(10) yes C7 C8 C9 . . 106.10(10) yes C8 C9 C10 . . 105.90(10) yes C10 C9 C11 . . 123.40(10) yes C11 C9 C8 . . 130.70(10) yes N1 C10 C9 . . 110.70(10) yes O3 C11 C9 . . 125.80(10) yes O3 C11 C12 . . 116.90(10) yes C9 C11 C12 . . 117.30(10) yes O4 C12 N2 . . 124.00(10) yes O4 C12 C11 . . 118.90(10) yes N2 C12 C11 . . 117.00(10) yes N2 C13 C14 . . 113.2(2) yes N2 C15 C16 . . 112.4(2) yes C10 N1 H1N . . 127.0(10) no C7 N1 H1N . . 124.0(10) no H1W1 O1W H1W2 . . 112(2) no C2 C1 H1A . . 109.5 no C2 C1 H1B . . 109.5 no H1A C1 H1B . . 109.5 no C2 C1 H1C . . 109.5 no H1A C1 H1C . . 109.5 no H1B C1 H1C . . 109.5 no C3 C4 H4 . . 119.4 no C5 C4 H4 . . 119.4 no C6 C5 H5 . . 119.5 no C4 C5 H5 . . 119.5 no C5 C6 H6 . . 121.4 no C7 C6 H6 . . 121.4 no N1 C10 H10 . . 124.7 no C9 C10 H10 . . 124.7 no N2 C13 H13A . . 108.9 no C14 C13 H13A . . 108.9 no N2 C13 H13B . . 108.9 no C14 C13 H13B . . 108.9 no H13A C13 H13B . . 107.8 no C13 C14 H14A . . 109.5 no C13 C14 H14B . . 109.5 no H14A C14 H14B . . 109.5 no C13 C14 H14C . . 109.5 no H14A C14 H14C . . 109.5 no H14B C14 H14C . . 109.5 no N2 C15 H15A . . 109.1 no C16 C15 H15A . . 109.1 no N2 C15 H15B . . 109.1 no C16 C15 H15B . . 109.1 no H15A C15 H15B . . 107.9 no C15 C16 H16A . . 109.5 no C15 C16 H16B . . 109.5 no H16A C16 H16B . . 109.5 no C15 C16 H16C . . 109.5 no H16A C16 H16C . . 109.5 no H16B C16 H16C . . 109.5 no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag O1 C2 . 1.353(2) yes O1 C3 . 1.402(2) yes O2 C2 . 1.199(2) yes O3 C11 . 1.225(2) yes O4 C12 . 1.236(2) yes N1 C7 . 1.379(2) yes N1 C10 . 1.339(2) yes N2 C12 . 1.327(2) yes N2 C15 . 1.467(2) yes N2 C13 . 1.467(2) yes C1 C2 . 1.487(2) yes C3 C4 . 1.372(2) yes C3 C8 . 1.399(2) yes C4 C5 . 1.393(2) yes C5 C6 . 1.370(2) yes C6 C7 . 1.392(2) yes C7 C8 . 1.410(2) yes C8 C9 . 1.449(2) yes C9 C10 . 1.383(2) yes C9 C11 . 1.439(2) yes C11 C12 . 1.526(2) yes C13 C14 . 1.503(3) yes C15 C16 . 1.480(3) yes O1W H1W1 . 0.850(10) no O1W H1W2 . 0.850(10) no N1 H1N . 0.860(10) no C1 H1A . 0.96 no C1 H1B . 0.96 no C1 H1C . 0.96 no C4 H4 . 0.93 no C5 H5 . 0.93 no C6 H6 . 0.93 no C10 H10 . 0.93 no C13 H13A . 0.97 no C13 H13B . 0.97 no C14 H14A . 0.96 no C14 H14B . 0.96 no C14 H14C . 0.96 no C15 H15A . 0.97 no C15 H15B . 0.97 no C16 H16A . 0.96 no C16 H16B . 0.96 no C16 H16C . 0.96 no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N1 H1N O1W . 0.860(10) 1.910(10) 2.743(2) 161(2) yes O1W H1W1 O2 3_666 0.850(10) 1.990(10) 2.841(2) 175(2) yes O1W H1W2 O4 4_656 0.850(10) 1.980(10) 2.810(2) 165(2) yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_2 _geom_torsion_site_symmetry_3 _geom_torsion_site_symmetry_4 _geom_torsion _geom_torsion_publ_flag C3 O1 C2 O2 . . . . 3.0(2) no C3 O1 C2 C1 . . . . -177.90(10) no C2 O1 C3 C4 . . . . -112.5(2) no C2 O1 C3 C8 . . . . 70.9(2) no O1 C3 C4 C5 . . . . -177.80(10) no C8 C3 C4 C5 . . . . -1.2(2) no C3 C4 C5 C6 . . . . -0.1(3) no C4 C5 C6 C7 . . . . 0.5(2) no C10 N1 C7 C6 . . . . -179.80(10) no C10 N1 C7 C8 . . . . 0.1(2) no C5 C6 C7 N1 . . . . -179.70(10) no C5 C6 C7 C8 . . . . 0.3(2) no C4 C3 C8 C7 . . . . 1.9(2) no O1 C3 C8 C7 . . . . 178.50(10) no C4 C3 C8 C9 . . . . -179.6(2) no O1 C3 C8 C9 . . . . -3.0(2) no N1 C7 C8 C3 . . . . 178.50(10) no C6 C7 C8 C3 . . . . -1.5(2) no N1 C7 C8 C9 . . . . -0.40(10) no C6 C7 C8 C9 . . . . 179.50(10) no C3 C8 C9 C10 . . . . -178.1(2) no C7 C8 C9 C10 . . . . 0.60(10) no C3 C8 C9 C11 . . . . 2.5(2) no C7 C8 C9 C11 . . . . -178.90(10) no C7 N1 C10 C9 . . . . 0.2(2) no C11 C9 C10 N1 . . . . 179.00(10) no C8 C9 C10 N1 . . . . -0.5(2) no C10 C9 C11 O3 . . . . -169.30(10) no C8 C9 C11 O3 . . . . 10.1(2) no C10 C9 C11 C12 . . . . 7.7(2) no C8 C9 C11 C12 . . . . -173.00(10) no C15 N2 C12 O4 . . . . -0.3(2) no C13 N2 C12 O4 . . . . -179.5(2) no C15 N2 C12 C11 . . . . 176.80(10) no C13 N2 C12 C11 . . . . -2.5(2) no O3 C11 C12 O4 . . . . 94.3(2) no C9 C11 C12 O4 . . . . -82.9(2) no O3 C11 C12 N2 . . . . -82.9(2) no C9 C11 C12 N2 . . . . 99.9(2) no C12 N2 C13 C14 . . . . 98.0(2) no C15 N2 C13 C14 . . . . -81.3(2) no C12 N2 C15 C16 . . . . 82.8(2) no C13 N2 C15 C16 . . . . -98.0(2) no