#------------------------------------------------------------------------------ #$Date: 2010-01-30 15:59:17 +0200 (Sat, 30 Jan 2010) $ #$Revision: 966 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/2203533.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2203533 _space_group_IT_number 14 _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _[local]_cod_cif_authors_sg_H-M 'P 21/c' loop_ _publ_author_name 'Guo, Ming-Lin' _publ_section_title ; 2-(4-Methylpiperazin-4-ium-1-ylcarbonyl)benzoate monohydrate ; _journal_issue 5 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first o738 _journal_page_last o739 _journal_volume 60 _journal_year 2004 _chemical_formula_iupac 'C13 H16 N2 O3, H2 O' _chemical_formula_moiety 'C13 H16 N2 O3, H2 O' _chemical_formula_sum 'C13 H18 N2 O4' _chemical_formula_weight 266.29 _chemical_name_systematic ; 2-(4-methylpiperazin-4-ium-1-carbonyl)benzoate monohydrate ; _symmetry_cell_setting Monoclinic _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 116.478(6) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 11.494(6) _cell_length_b 12.754(5) _cell_length_c 10.252(4) _cell_measurement_reflns_used 734 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 24.85 _cell_measurement_theta_min 2.54 _cell_volume 1345.3(10) _computing_cell_refinement SMART _computing_data_collection 'SMART (Bruker 1997)' _computing_data_reduction 'SAINT (Bruker 1997)' _computing_molecular_graphics SHELXTL _computing_publication_material SHELXTL _computing_structure_refinement SHELXTL _computing_structure_solution 'SHELXTL (Sheldrick, 2001)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.997 _diffrn_measured_fraction_theta_max 0.997 _diffrn_measurement_device_type 'Bruker SMART CCD area-detector' _diffrn_measurement_method '\f and \w' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0323 _diffrn_reflns_av_sigmaI/netI 0.0378 _diffrn_reflns_limit_h_max 14 _diffrn_reflns_limit_h_min -9 _diffrn_reflns_limit_k_max 15 _diffrn_reflns_limit_k_min -15 _diffrn_reflns_limit_l_max 12 _diffrn_reflns_limit_l_min -12 _diffrn_reflns_number 7655 _diffrn_reflns_theta_full 26.41 _diffrn_reflns_theta_max 26.41 _diffrn_reflns_theta_min 1.98 _diffrn_standards_decay_% 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.098 _exptl_absorpt_correction_T_max 0.985 _exptl_absorpt_correction_T_min 0.965 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Sheldrick, 1996)' _exptl_crystal_colour Colorless _exptl_crystal_density_diffrn 1.315 _exptl_crystal_density_method 'not measured' _exptl_crystal_description Prism _exptl_crystal_F_000 568 _exptl_crystal_size_max 0.34 _exptl_crystal_size_mid 0.22 _exptl_crystal_size_min 0.18 _refine_diff_density_max 0.187 _refine_diff_density_min -0.160 _refine_ls_extinction_coef 0.023(2) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXL97 _refine_ls_goodness_of_fit_ref 1.005 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 174 _refine_ls_number_reflns 2757 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.005 _refine_ls_R_factor_all 0.0730 _refine_ls_R_factor_gt 0.0397 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0542P)^2^+0.1704P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0948 _refine_ls_wR_factor_ref 0.1103 _reflns_number_gt 1844 _reflns_number_total 2757 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file ac6089.cif loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol N1 0.47564(12) 0.48079(10) 0.22767(14) 0.0363(3) Uani d . 1 N N2 0.22630(12) 0.41742(10) 0.01290(15) 0.0374(3) Uani d . 1 N H2 0.2391 0.4318 -0.0667 0.045 Uiso calc R 1 H O1 0.59836(11) 0.59592(9) 0.40202(13) 0.0460(3) Uani d . 1 O O2 0.72528(12) 0.52754(11) 0.20561(14) 0.0543(4) Uani d . 1 O O3 0.91824(12) 0.45455(12) 0.27833(15) 0.0632(4) Uani d . 1 O C1 0.46002(15) 0.38234(13) 0.14978(19) 0.0415(4) Uani d . 1 C H1A 0.5237 0.3320 0.2125 0.050 Uiso calc R 1 H H1B 0.4749 0.3937 0.0648 0.050 Uiso calc R 1 H C2 0.32504(15) 0.33916(13) 0.10271(19) 0.0432(4) Uani d . 1 C H2A 0.3144 0.2755 0.0467 0.052 Uiso calc R 1 H H2B 0.3129 0.3218 0.1880 0.052 Uiso calc R 1 H C3 0.24354(15) 0.51663(13) 0.09581(19) 0.0385(4) Uani d . 1 C H3A 0.2283 0.5037 0.1802 0.046 Uiso calc R 1 H H3B 0.1805 0.5679 0.0347 0.046 Uiso calc R 1 H C4 0.37884(15) 0.55929(12) 0.14469(19) 0.0382(4) Uani d . 1 C H4A 0.3905 0.5799 0.0602 0.046 Uiso calc R 1 H H4B 0.3905 0.6210 0.2046 0.046 Uiso calc R 1 H C5 0.09270(16) 0.37540(16) -0.0389(2) 0.0546(5) Uani d . 1 C H5A 0.0749 0.3638 0.0430 0.082 Uiso calc R 1 H H5B 0.0854 0.3104 -0.0891 0.082 Uiso calc R 1 H H5C 0.0314 0.4249 -0.1040 0.082 Uiso calc R 1 H C6 0.58422(15) 0.50807(13) 0.34682(18) 0.0356(4) Uani d . 1 C C7 0.68344(15) 0.42455(12) 0.42379(17) 0.0351(4) Uani d . 1 C C8 0.79608(15) 0.41225(12) 0.40640(17) 0.0357(4) Uani d . 1 C C9 0.88945(16) 0.34121(14) 0.49599(19) 0.0449(4) Uani d . 1 C H9 0.9662 0.3337 0.4874 0.054 Uiso calc R 1 H C10 0.87048(18) 0.28183(15) 0.59711(19) 0.0510(5) Uani d . 1 C H10 0.9339 0.2346 0.6558 0.061 Uiso calc R 1 H C11 0.75753(19) 0.29263(15) 0.6109(2) 0.0535(5) Uani d . 1 C H11 0.7439 0.2518 0.6780 0.064 Uiso calc R 1 H C12 0.66403(18) 0.36410(14) 0.52512(19) 0.0474(5) Uani d . 1 C H12 0.5881 0.3717 0.5354 0.057 Uiso calc R 1 H C13 0.81701(16) 0.46983(13) 0.29007(18) 0.0394(4) Uani d . 1 C O4 0.84020(12) 0.62888(11) 0.66502(14) 0.0618(4) Uani d . 1 O H4C 0.7724 0.6122 0.5885 0.093 Uiso d R 1 H H4D 0.9062 0.5963 0.6691 0.093 Uiso d R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 N1 0.0292(7) 0.0313(7) 0.0423(8) 0.0037(6) 0.0104(6) -0.0024(6) N2 0.0315(7) 0.0409(8) 0.0392(8) -0.0035(6) 0.0153(6) -0.0003(6) O1 0.0402(7) 0.0362(7) 0.0540(8) 0.0002(5) 0.0142(6) -0.0087(6) O2 0.0440(7) 0.0721(9) 0.0501(8) 0.0155(6) 0.0239(6) 0.0198(7) O3 0.0435(8) 0.0813(10) 0.0741(10) 0.0124(7) 0.0345(7) 0.0127(8) C1 0.0352(9) 0.0387(10) 0.0457(10) 0.0054(7) 0.0136(8) -0.0045(8) C2 0.0432(10) 0.0329(9) 0.0471(10) 0.0016(7) 0.0144(8) -0.0005(8) C3 0.0331(9) 0.0387(9) 0.0438(10) 0.0048(7) 0.0171(7) 0.0022(8) C4 0.0342(9) 0.0330(9) 0.0439(10) 0.0032(7) 0.0144(8) 0.0035(7) C5 0.0371(10) 0.0608(12) 0.0619(12) -0.0125(9) 0.0184(9) -0.0049(10) C6 0.0314(9) 0.0372(9) 0.0412(9) -0.0004(7) 0.0188(7) 0.0004(8) C7 0.0331(9) 0.0338(9) 0.0330(9) 0.0016(7) 0.0100(7) -0.0029(7) C8 0.0324(9) 0.0349(9) 0.0329(9) 0.0014(7) 0.0083(7) -0.0065(7) C9 0.0380(9) 0.0449(10) 0.0438(10) 0.0083(8) 0.0109(8) -0.0050(9) C10 0.0553(11) 0.0436(10) 0.0395(10) 0.0135(9) 0.0081(9) 0.0033(9) C11 0.0684(13) 0.0469(11) 0.0432(11) 0.0053(10) 0.0231(10) 0.0094(9) C12 0.0498(11) 0.0495(11) 0.0460(10) 0.0039(9) 0.0241(9) 0.0045(9) C13 0.0342(9) 0.0420(10) 0.0401(10) -0.0009(8) 0.0148(8) -0.0077(8) O4 0.0483(8) 0.0704(10) 0.0571(8) 0.0021(7) 0.0148(6) -0.0122(7) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance N1 C6 1.346(2) N1 C1 1.456(2) N1 C4 1.4561(19) N2 C5 1.483(2) N2 C2 1.483(2) N2 C3 1.487(2) N2 H2 0.9100 O1 C6 1.2329(19) O2 C13 1.261(2) O3 C13 1.237(2) C1 C2 1.509(2) C1 H1A 0.9700 C1 H1B 0.9700 C2 H2A 0.9700 C2 H2B 0.9700 C3 C4 1.507(2) C3 H3A 0.9700 C3 H3B 0.9700 C4 H4A 0.9700 C4 H4B 0.9700 C5 H5A 0.9600 C5 H5B 0.9600 C5 H5C 0.9600 C6 C7 1.502(2) C7 C12 1.389(2) C7 C8 1.392(2) C8 C9 1.392(2) C8 C13 1.508(2) C9 C10 1.377(3) C9 H9 0.9300 C10 C11 1.374(3) C10 H10 0.9300 C11 C12 1.384(2) C11 H11 0.9300 C12 H12 0.9300 O4 H4C 0.8499 O4 H4D 0.8500 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C6 N1 C1 123.96(13) C6 N1 C4 120.68(13) C1 N1 C4 113.42(13) C5 N2 C2 111.26(14) C5 N2 C3 111.39(13) C2 N2 C3 110.34(12) C5 N2 H2 107.9 C2 N2 H2 107.9 C3 N2 H2 107.9 N1 C1 C2 110.37(13) N1 C1 H1A 109.6 C2 C1 H1A 109.6 N1 C1 H1B 109.6 C2 C1 H1B 109.6 H1A C1 H1B 108.1 N2 C2 C1 110.25(14) N2 C2 H2A 109.6 C1 C2 H2A 109.6 N2 C2 H2B 109.6 C1 C2 H2B 109.6 H2A C2 H2B 108.1 N2 C3 C4 110.61(13) N2 C3 H3A 109.5 C4 C3 H3A 109.5 N2 C3 H3B 109.5 C4 C3 H3B 109.5 H3A C3 H3B 108.1 N1 C4 C3 110.64(13) N1 C4 H4A 109.5 C3 C4 H4A 109.5 N1 C4 H4B 109.5 C3 C4 H4B 109.5 H4A C4 H4B 108.1 N2 C5 H5A 109.5 N2 C5 H5B 109.5 H5A C5 H5B 109.5 N2 C5 H5C 109.5 H5A C5 H5C 109.5 H5B C5 H5C 109.5 O1 C6 N1 122.05(15) O1 C6 C7 119.32(14) N1 C6 C7 118.24(14) C12 C7 C8 120.11(15) C12 C7 C6 116.68(15) C8 C7 C6 122.98(15) C9 C8 C7 118.45(16) C9 C8 C13 119.39(15) C7 C8 C13 122.11(14) C10 C9 C8 121.35(17) C10 C9 H9 119.3 C8 C9 H9 119.3 C11 C10 C9 119.74(17) C11 C10 H10 120.1 C9 C10 H10 120.1 C10 C11 C12 120.16(18) C10 C11 H11 119.9 C12 C11 H11 119.9 C11 C12 C7 120.15(18) C11 C12 H12 119.9 C7 C12 H12 119.9 O3 C13 O2 124.06(17) O3 C13 C8 119.25(15) O2 C13 C8 116.61(15) H4C O4 H4D 110.8 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C6 N1 C1 C2 139.99(16) C4 N1 C1 C2 -55.82(18) C5 N2 C2 C1 178.09(15) C3 N2 C2 C1 -57.73(18) N1 C1 C2 N2 56.35(19) C5 N2 C3 C4 -178.78(14) C2 N2 C3 C4 57.12(17) C6 N1 C4 C3 -140.07(15) C1 N1 C4 C3 55.16(18) N2 C3 C4 N1 -54.97(18) C1 N1 C6 O1 173.23(15) C4 N1 C6 O1 10.1(2) C1 N1 C6 C7 -14.0(2) C4 N1 C6 C7 -177.14(14) O1 C6 C7 C12 88.1(2) N1 C6 C7 C12 -84.87(19) O1 C6 C7 C8 -86.5(2) N1 C6 C7 C8 100.61(19) C12 C7 C8 C9 -2.2(2) C6 C7 C8 C9 172.12(15) C12 C7 C8 C13 175.16(15) C6 C7 C8 C13 -10.5(2) C7 C8 C9 C10 1.8(2) C13 C8 C9 C10 -175.65(15) C8 C9 C10 C11 -0.2(3) C9 C10 C11 C12 -1.0(3) C10 C11 C12 C7 0.6(3) C8 C7 C12 C11 1.1(3) C6 C7 C12 C11 -173.62(16) C9 C8 C13 O3 -1.5(2) C7 C8 C13 O3 -178.89(16) C9 C8 C13 O2 175.15(15) C7 C8 C13 O2 -2.2(2) loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA O4 H4D O3 3_766 0.85 1.95 2.782(2) 165 O4 H4C O1 . 0.85 2.07 2.9139(19) 171 N2 H2 O3 3_665 0.91 2.57 3.149(2) 123 N2 H2 O2 3_665 0.91 1.73 2.633(2) 173 _cod_database_code 2203533