#------------------------------------------------------------------------------ #$Date: 2011-01-02 22:00:31 +0200 (Sun, 02 Jan 2011) $ #$Revision: 5310 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/2204360.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2204360 loop_ _publ_author_name 'Li, Yan-Ping' 'Yang, Pin' 'Huang, Zi-Xiang' 'Xie, Fu-Xin' _publ_section_title ; [N,N'-ethylenediamide-bis(2-aminoethyl)]bis(imidazole)dicopper(II) diperchlorate ; _journal_issue 10 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first m1425 _journal_page_last m1427 _journal_volume 60 _journal_year 2004 _chemical_formula_iupac '[Cu2 C12 H20 N8 O2] , 2Cl O4' _chemical_formula_moiety 'C12 H20 Cl2 Cu2 N8 O10' _chemical_formula_sum 'C12 H20 Cl2 Cu2 N8 O10' _chemical_formula_weight 634.34 _chemical_name_common ; [N,N'-ethylenediamide-bis(2-aminoethyl)]bis(imidazole) dicopper(II) diperchlorate ; _chemical_name_systematic ; [N,N'-ethylenediamide-bis(2-aminoethyl)]bis(imidazole) dicopper(II) diperchlorate ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 114.741(12) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 8.7884(15) _cell_length_b 13.765(3) _cell_length_c 10.2773(12) _cell_measurement_reflns_used 25 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 18.88 _cell_measurement_theta_min 13.64 _cell_volume 1129.1(4) _computing_cell_refinement 'CAD-4 Software' _computing_data_collection 'CAD-4 Software (Enraf-Nonius, 1989)' _computing_data_reduction 'MolEN (Fair, 1990)' _computing_molecular_graphics 'SHELXTL (Sheldrick, 1997b)' _computing_publication_material 'SHELXTL ' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997a)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997a)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.977 _diffrn_measured_fraction_theta_max 0.977 _diffrn_measurement_device_type 'Enraf-Nonius CAD4' _diffrn_measurement_method \w/2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0379 _diffrn_reflns_av_sigmaI/netI 0.0157 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 16 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 11 _diffrn_reflns_limit_l_min -12 _diffrn_reflns_number 2294 _diffrn_reflns_theta_full 25.95 _diffrn_reflns_theta_max 25.95 _diffrn_reflns_theta_min 2.97 _diffrn_standards_decay_% 1.0 _diffrn_standards_interval_count 300 _diffrn_standards_interval_time 120 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 2.187 _exptl_absorpt_correction_T_max 0.335 _exptl_absorpt_correction_T_min 0.291 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Sheldrick, 1996)' _exptl_crystal_colour blue _exptl_crystal_density_diffrn 1.866 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 640 _exptl_crystal_size_max 0.60 _exptl_crystal_size_mid 0.50 _exptl_crystal_size_min 0.50 _refine_diff_density_max 0.773 _refine_diff_density_min -0.413 _refine_ls_extinction_coef 0.060(4) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXL97 _refine_ls_goodness_of_fit_ref 1.060 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 155 _refine_ls_number_reflns 2154 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.060 _refine_ls_R_factor_all 0.0309 _refine_ls_R_factor_gt 0.0293 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0425P)^2^+0.9241P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0755 _refine_ls_wR_factor_ref 0.0766 _reflns_number_gt 2058 _reflns_number_total 2154 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file lh6262.cif _[local]_cod_cif_authors_sg_H-M 'P 21/n' _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius ; _cod_database_code 2204360 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol Cu 0.23315(3) 0.10063(2) 0.19970(3) 0.02772(15) Uani d . 1 Cu Cl 0.07268(7) 0.35787(4) 0.24939(6) 0.03650(19) Uani d . 1 Cl O -0.1626(2) -0.07167(13) 0.00895(17) 0.0306(4) Uani d . 1 O O1 0.0969(3) 0.43705(19) 0.1715(3) 0.0680(7) Uani d . 1 O O2 -0.0675(3) 0.3811(2) 0.2798(3) 0.0739(7) Uani d . 1 O O3 0.0330(3) 0.27124(16) 0.1643(2) 0.0579(6) Uani d . 1 O O4 0.2184(3) 0.34287(16) 0.3802(2) 0.0559(6) Uani d . 1 O N1 0.0387(2) 0.02667(14) 0.1743(2) 0.0280(4) Uani d . 1 N N2 0.2527(3) 0.11431(16) 0.4018(2) 0.0333(5) Uani d . 1 N H2A 0.3309 0.0731 0.4603 0.040 Uiso calc R 1 H H2D 0.2838 0.1753 0.4335 0.040 Uiso calc R 1 H N3 0.4364(3) 0.16672(16) 0.2182(2) 0.0346(5) Uani d . 1 N N4 0.6528(3) 0.2618(2) 0.2876(3) 0.0511(6) Uani d . 1 N H4A 0.7240 0.3059 0.3342 0.061 Uiso calc R 1 H C1 -0.0379(3) -0.01392(15) 0.0517(2) 0.0243(4) Uani d . 1 C C2 0.0047(3) 0.0108(2) 0.2990(3) 0.0370(6) Uani d . 1 C H2B 0.0492 -0.0515 0.3424 0.044 Uiso calc R 1 H H2C -0.1151 0.0113 0.2720 0.044 Uiso calc R 1 H C3 0.0885(4) 0.0921(2) 0.4026(3) 0.0458(7) Uani d . 1 C H3A 0.0181 0.1495 0.3754 0.055 Uiso calc R 1 H H3B 0.1041 0.0732 0.4983 0.055 Uiso calc R 1 H C4 0.5204(4) 0.2354(2) 0.3091(3) 0.0454(7) Uani d . 1 C H4B 0.4907 0.2617 0.3786 0.054 Uiso calc R 1 H C5 0.6567(3) 0.2067(2) 0.1787(3) 0.0487(7) Uani d . 1 C H5A 0.7367 0.2089 0.1417 0.058 Uiso calc R 1 H C6 0.5214(3) 0.1485(2) 0.1357(3) 0.0422(6) Uani d . 1 C H6A 0.4906 0.1033 0.0619 0.051 Uiso calc R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Cu 0.0252(2) 0.0322(2) 0.0236(2) -0.00950(10) 0.00814(13) -0.00460(10) Cl 0.0312(3) 0.0332(3) 0.0369(3) -0.0074(2) 0.0061(2) 0.0049(2) O 0.0291(8) 0.0363(9) 0.0246(8) -0.0126(7) 0.0094(7) -0.0021(7) O1 0.0644(15) 0.0603(14) 0.0607(14) -0.0244(12) 0.0079(12) 0.0242(12) O2 0.0516(14) 0.0915(19) 0.0845(19) -0.0082(13) 0.0344(14) -0.0105(16) O3 0.0655(14) 0.0429(12) 0.0462(12) -0.0018(10) 0.0046(10) -0.0045(9) O4 0.0489(12) 0.0552(13) 0.0410(11) -0.0049(10) -0.0034(9) 0.0054(10) N1 0.0274(9) 0.0332(10) 0.0220(9) -0.0069(8) 0.0089(8) -0.0012(8) N2 0.0352(11) 0.0344(11) 0.0257(10) -0.0053(8) 0.0082(8) -0.0056(8) N3 0.0299(10) 0.0370(11) 0.0345(11) -0.0111(8) 0.0111(8) -0.0066(9) N4 0.0402(13) 0.0508(14) 0.0541(15) -0.0235(11) 0.0116(11) -0.0065(12) C1 0.0228(10) 0.0240(10) 0.0226(10) -0.0017(8) 0.0061(8) 0.0022(8) C2 0.0401(13) 0.0446(14) 0.0280(12) -0.0128(11) 0.0160(10) -0.0022(10) C3 0.0541(17) 0.0536(17) 0.0356(14) -0.0119(13) 0.0246(13) -0.0081(12) C4 0.0423(14) 0.0464(16) 0.0459(15) -0.0183(12) 0.0170(12) -0.0142(13) C5 0.0340(14) 0.0619(18) 0.0530(17) -0.0102(13) 0.0211(12) 0.0075(14) C6 0.0384(14) 0.0487(16) 0.0420(14) -0.0087(12) 0.0192(12) -0.0071(12) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cu Cu 0.3201 1.2651 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag N1 Cu N3 . . 175.16(9) y N1 Cu O . 3 83.63(7) y N3 Cu O . 3 93.33(8) y N1 Cu N2 . . 82.91(8) y N3 Cu N2 . . 100.18(9) y O Cu N2 3 . 166.48(8) y O1 Cl O2 . . 107.34(19) ? O1 Cl O4 . . 110.71(14) ? O2 Cl O4 . . 109.96(17) ? O1 Cl O3 . . 110.53(16) ? O2 Cl O3 . . 107.95(16) ? O4 Cl O3 . . 110.26(13) ? C1 O Cu . 3 109.23(13) ? C1 N1 C2 . . 125.82(19) ? C1 N1 Cu . . 116.02(15) ? C2 N1 Cu . . 117.60(15) ? C3 N2 Cu . . 108.85(16) ? C3 N2 H2A . . 109.9 ? Cu N2 H2A . . 109.9 ? C3 N2 H2D . . 109.9 ? Cu N2 H2D . . 109.9 ? H2A N2 H2D . . 108.3 ? C4 N3 C6 . . 106.4(2) ? C4 N3 Cu . . 128.73(19) ? C6 N3 Cu . . 124.90(18) ? C4 N4 C5 . . 108.1(2) ? C4 N4 H4A . . 126.0 ? C5 N4 H4A . . 126.0 ? O C1 N1 . . 129.3(2) ? O C1 C1 . 3 118.7(2) ? N1 C1 C1 . 3 111.9(2) ? N1 C2 C3 . . 106.9(2) ? N1 C2 H2B . . 110.3 ? C3 C2 H2B . . 110.3 ? N1 C2 H2C . . 110.3 ? C3 C2 H2C . . 110.3 ? H2B C2 H2C . . 108.6 ? N2 C3 C2 . . 109.9(2) ? N2 C3 H3A . . 109.7 ? C2 C3 H3A . . 109.7 ? N2 C3 H3B . . 109.7 ? C2 C3 H3B . . 109.7 ? H3A C3 H3B . . 108.2 ? N3 C4 N4 . . 110.5(3) ? N3 C4 H4B . . 124.8 ? N4 C4 H4B . . 124.8 ? C6 C5 N4 . . 106.2(2) ? C6 C5 H5A . . 126.9 ? N4 C5 H5A . . 126.9 ? C5 C6 N3 . . 108.9(3) ? C5 C6 H6A . . 125.5 ? N3 C6 H6A . . 125.5 ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Cu N1 . 1.9107(19) y Cu N3 . 1.942(2) y Cu O 3 2.0071(16) y Cu N2 . 2.020(2) y Cl O1 . 1.420(2) y Cl O2 . 1.428(3) y Cl O4 . 1.431(2) y Cl O3 . 1.433(2) y O C1 . 1.274(3) ? O Cu 3 2.0071(16) ? N1 C1 . 1.281(3) ? N1 C2 . 1.450(3) ? N2 C3 . 1.478(4) ? N2 H2A . 0.9000 ? N2 H2D . 0.9000 ? N3 C4 . 1.317(3) ? N3 C6 . 1.367(3) ? N4 C4 . 1.322(4) ? N4 C5 . 1.364(4) ? N4 H4A . 0.8600 ? C1 C1 3 1.521(4) ? C2 C3 . 1.508(4) ? C2 H2B . 0.9700 ? C2 H2C . 0.9700 ? C3 H3A . 0.9700 ? C3 H3B . 0.9700 ? C4 H4B . 0.9300 ? C5 C6 . 1.346(4) ? C5 H5A . 0.9300 ? C6 H6A . 0.9300 ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N2 H2D O4 . 0.90 2.39 3.159(3) 144.2 y N2 H2A O1 4_666 0.90 2.44 3.212(3) 144.1 y