#------------------------------------------------------------------------------ #$Date: 2016-02-20 18:35:30 +0200 (Sat, 20 Feb 2016) $ #$Revision: 176787 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/21/16/2211657.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2211657 loop_ _publ_author_name 'De-Jun Xiong' 'Cui-Ping Han' 'Hai-Bing Li' _publ_section_title ; Two tautomers in one crystal structure: ethyl 6(4)-oxo-1,6(1,4)-dihydropyrimidine-5-carboxylate ; _journal_coeditor_code WN2076 _journal_issue 12 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o5501 _journal_page_last o5502 _journal_paper_doi 10.1107/S1600536806045995 _journal_volume 62 _journal_year 2006 _chemical_formula_iupac 'C7 H8 N2 O3' _chemical_formula_moiety 'C7 H8 N2 O3' _chemical_formula_sum 'C7 H8 N2 O3' _chemical_formula_weight 168.15 _chemical_name_systematic ; ethyl 6-oxo-1,6-dihydropyrimidine-5-carboxylate--ethyl 4-oxo-1,4-dihydropyrimidine-5-carboxylate (1/1) ; _space_group_IT_number 9 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall 'C -2yc' _symmetry_space_group_name_H-M 'C 1 c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 97.687(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 8 _cell_length_a 4.768(3) _cell_length_b 25.590(16) _cell_length_c 12.821(8) _cell_measurement_reflns_used 1061 _cell_measurement_temperature 292(2) _cell_measurement_theta_max 20.23 _cell_measurement_theta_min 2.26 _cell_volume 1550.3(17) _computing_cell_refinement 'SAINT (Bruker, 1999)' _computing_data_collection 'SMART (Bruker, 1997)' _computing_data_reduction SAINT _computing_molecular_graphics 'SHELXTL (Bruker, 2001)' _computing_publication_material SHELXTL _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 292(2) _diffrn_measured_fraction_theta_full 1.000 _diffrn_measured_fraction_theta_max 1.000 _diffrn_measurement_device_type 'Bruker SMART APEX CCD' _diffrn_measurement_method '\f and \w' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0529 _diffrn_reflns_av_sigmaI/netI 0.0555 _diffrn_reflns_limit_h_max 5 _diffrn_reflns_limit_h_min -5 _diffrn_reflns_limit_k_max 31 _diffrn_reflns_limit_k_min -29 _diffrn_reflns_limit_l_max 15 _diffrn_reflns_limit_l_min -15 _diffrn_reflns_number 4986 _diffrn_reflns_theta_full 26.00 _diffrn_reflns_theta_max 26.00 _diffrn_reflns_theta_min 1.59 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.115 _exptl_absorpt_correction_type none _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.441 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 704 _exptl_crystal_size_max 0.40 _exptl_crystal_size_mid 0.10 _exptl_crystal_size_min 0.03 _refine_diff_density_max 0.250 _refine_diff_density_min -0.168 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.033 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 219 _refine_ls_number_reflns 1526 _refine_ls_number_restraints 4 _refine_ls_restrained_S_all 1.031 _refine_ls_R_factor_all 0.0767 _refine_ls_R_factor_gt 0.0527 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0587P)^2^] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1088 _refine_ls_wR_factor_ref 0.1176 _reflns_number_gt 1121 _reflns_number_total 1526 _reflns_threshold_expression I>2\s(I) _cod_data_source_file wn2076.cif _cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_original_cell_volume 1550.4(17) _cod_original_sg_symbol_H-M 'C c' _cod_database_code 2211657 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' 'x, -y, z+1/2' 'x+1/2, y+1/2, z' 'x+1/2, -y+1/2, z+1/2' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy C C1 0.5020(10) 0.10368(18) 0.5261(4) 0.0447(11) Uani d . 1 C C2 0.6793(9) 0.14479(16) 0.4943(3) 0.0404(11) Uani d . 1 C C3 0.8987(12) 0.1440(2) 0.6751(4) 0.0548(14) Uani d . 1 H H3 1.0341 0.1590 0.7252 0.066 Uiso calc R 1 C C4 0.5475(12) 0.0869(2) 0.6282(4) 0.0589(14) Uani d . 1 H H4 0.4319 0.0601 0.6468 0.071 Uiso calc R 1 C C5 0.2728(11) 0.0773(2) 0.4559(5) 0.0589(14) Uani d . 1 C C6 0.0149(16) 0.0703(3) 0.2828(6) 0.090(2) Uani d . 1 H H6A -0.1379 0.0596 0.3210 0.108 Uiso calc R 1 H H6B -0.0596 0.0956 0.2298 0.108 Uiso calc R 1 C C7 0.1191(17) 0.0266(3) 0.2338(6) 0.108(3) Uani d . 1 H H7A 0.2581 0.0377 0.1908 0.162 Uiso calc R 1 H H7B -0.0339 0.0095 0.1906 0.162 Uiso calc R 1 H H7C 0.2042 0.0027 0.2865 0.162 Uiso calc R 1 C C8 0.6203(10) 0.29602(18) 0.6021(3) 0.0382(10) Uani d . 1 C C9 0.4030(9) 0.25740(18) 0.6016(3) 0.0383(11) Uani d . 1 C C10 0.5240(11) 0.2486(2) 0.7818(4) 0.0479(12) Uani d . 1 H H10 0.4921 0.2336 0.8452 0.057 Uiso calc R 1 C C11 0.7818(10) 0.30764(18) 0.6961(3) 0.0429(11) Uani d . 1 H H11 0.9249 0.3325 0.6985 0.051 Uiso calc R 1 C C12 0.6773(10) 0.32283(17) 0.5031(3) 0.0434(11) Uani d . 1 C C13 0.9330(14) 0.3913(2) 0.4335(4) 0.0693(17) Uani d . 1 H H13A 0.7644 0.4047 0.3913 0.083 Uiso calc R 1 H H13B 1.0290 0.3682 0.3899 0.083 Uiso calc R 1 C C14 1.1210(16) 0.4348(2) 0.4721(5) 0.084(2) Uani d . 1 H H14A 1.0220 0.4583 0.5128 0.126 Uiso calc R 1 H H14B 1.1788 0.4532 0.4133 0.126 Uiso calc R 1 H H14C 1.2849 0.4213 0.5153 0.126 Uiso calc R 1 N N1 0.8717(8) 0.16304(14) 0.5768(3) 0.0426(9) Uani d D 1 H H1 0.9673 0.1895 0.5602 0.051 Uiso d RD 1 N N2 0.7456(11) 0.10560(18) 0.7047(3) 0.0646(12) Uani d . 1 N N3 0.3623(9) 0.23451(16) 0.6977(3) 0.0497(11) Uani d . 1 N N4 0.7330(8) 0.28318(16) 0.7841(3) 0.0474(10) Uani d D 1 H H4A 0.8566 0.2903 0.8377 0.057 Uiso d RD 1 O O1 0.6751(6) 0.16546(13) 0.4074(2) 0.0520(9) Uani d . 1 O O2 0.1230(10) 0.04496(17) 0.4861(4) 0.0884(14) Uani d . 1 O O3 0.2429(9) 0.09459(17) 0.3562(3) 0.0785(13) Uani d . 1 O O4 0.2451(7) 0.24239(13) 0.5226(2) 0.0558(10) Uani d . 1 O O5 0.5775(9) 0.31038(14) 0.4162(2) 0.0647(10) Uani d . 1 O O6 0.8548(8) 0.36256(14) 0.5243(2) 0.0561(9) Uani d . 1 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 C1 0.038(3) 0.051(3) 0.046(3) 0.000(2) 0.008(2) -0.001(2) C2 0.040(3) 0.044(3) 0.035(2) 0.006(2) 0.000(2) -0.002(2) C3 0.058(3) 0.069(4) 0.037(3) 0.005(3) 0.002(2) 0.000(2) C4 0.062(4) 0.053(3) 0.064(4) -0.006(3) 0.017(3) 0.011(3) C5 0.043(3) 0.061(3) 0.075(4) -0.004(3) 0.013(3) -0.013(3) C6 0.089(5) 0.080(5) 0.092(5) -0.024(4) -0.017(4) -0.018(4) C7 0.121(7) 0.084(5) 0.108(5) 0.010(5) -0.022(5) -0.028(4) C8 0.041(3) 0.046(3) 0.027(2) 0.001(2) 0.0014(18) -0.0050(18) C9 0.038(3) 0.048(3) 0.026(2) 0.006(2) -0.0062(19) 0.0002(19) C10 0.051(3) 0.063(3) 0.030(2) 0.002(3) 0.004(2) -0.001(2) C11 0.041(3) 0.053(3) 0.033(2) -0.001(2) -0.0009(19) -0.007(2) C12 0.045(3) 0.048(3) 0.036(3) 0.006(2) 0.001(2) 0.000(2) C13 0.090(5) 0.066(4) 0.054(3) -0.006(3) 0.016(3) 0.012(3) C14 0.105(6) 0.074(4) 0.074(4) -0.026(4) 0.015(4) 0.000(3) N1 0.047(3) 0.048(2) 0.0309(19) -0.0016(19) -0.0011(16) 0.0016(17) N2 0.071(3) 0.074(3) 0.048(2) -0.014(3) 0.007(2) 0.012(2) N3 0.052(3) 0.067(3) 0.0296(19) -0.006(2) 0.0030(18) 0.0010(17) N4 0.043(2) 0.071(3) 0.0261(18) -0.001(2) -0.0051(16) -0.0038(18) O1 0.046(2) 0.068(2) 0.0394(18) 0.0001(17) -0.0026(16) 0.0100(16) O2 0.078(3) 0.092(3) 0.095(3) -0.041(3) 0.012(2) -0.006(3) O3 0.069(3) 0.096(3) 0.065(3) -0.025(2) -0.011(2) -0.008(2) O4 0.062(2) 0.073(2) 0.0284(16) -0.0162(18) -0.0102(15) -0.0012(15) O5 0.082(3) 0.084(2) 0.0270(17) -0.023(2) 0.0030(16) 0.0005(17) O6 0.070(2) 0.059(2) 0.0385(16) -0.0171(19) 0.0055(17) -0.0006(16) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C4 C1 C2 118.5(4) C4 C1 C5 116.6(5) C2 C1 C5 124.9(4) O1 C2 N1 118.3(4) O1 C2 C1 129.1(4) N1 C2 C1 112.5(4) N2 C3 N1 123.8(5) N2 C3 H3 118.1 N1 C3 H3 118.1 N2 C4 C1 126.0(5) N2 C4 H4 117.0 C1 C4 H4 117.0 O2 C5 O3 123.2(5) O2 C5 C1 123.0(5) O3 C5 C1 113.8(5) C7 C6 O3 110.2(6) C7 C6 H6A 109.6 O3 C6 H6A 109.6 C7 C6 H6B 109.6 O3 C6 H6B 109.6 H6A C6 H6B 108.1 C6 C7 H7A 109.5 C6 C7 H7B 109.5 H7A C7 H7B 109.5 C6 C7 H7C 109.5 H7A C7 H7C 109.5 H7B C7 H7C 109.5 C11 C8 C9 118.3(4) C11 C8 C12 120.0(4) C9 C8 C12 121.6(4) O4 C9 N3 116.7(4) O4 C9 C8 125.3(4) N3 C9 C8 118.0(4) N3 C10 N4 124.6(4) N3 C10 H10 117.7 N4 C10 H10 117.7 N4 C11 C8 119.9(5) N4 C11 H11 120.0 C8 C11 H11 120.0 O5 C12 O6 124.0(4) O5 C12 C8 125.0(4) O6 C12 C8 111.0(4) O6 C13 C14 108.7(5) O6 C13 H13A 110.0 C14 C13 H13A 110.0 O6 C13 H13B 110.0 C14 C13 H13B 110.0 H13A C13 H13B 108.3 C13 C14 H14A 109.5 C13 C14 H14B 109.5 H14A C14 H14B 109.5 C13 C14 H14C 109.5 H14A C14 H14C 109.5 H14B C14 H14C 109.5 C3 N1 C2 124.5(4) C3 N1 H1 122.1 C2 N1 H1 113.3 C3 N2 C4 114.7(4) C10 N3 C9 118.7(4) C10 N4 C11 120.4(4) C10 N4 H4A 126.1 C11 N4 H4A 113.3 C5 O3 C6 116.3(5) C12 O6 C13 116.3(4) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance C1 C4 1.366(7) C1 C2 1.442(6) C1 C5 1.483(7) C2 O1 1.230(5) C2 N1 1.385(5) C3 N2 1.310(7) C3 N1 1.341(6) C3 H3 0.9300 C4 N2 1.355(7) C4 H4 0.9300 C5 O2 1.190(6) C5 O3 1.343(7) C6 C7 1.406(9) C6 O3 1.476(7) C6 H6A 0.9700 C6 H6B 0.9700 C7 H7A 0.9600 C7 H7B 0.9600 C7 H7C 0.9600 C8 C11 1.373(6) C8 C9 1.431(6) C8 C12 1.500(6) C9 O4 1.239(5) C9 N3 1.402(6) C10 N3 1.290(6) C10 N4 1.329(6) C10 H10 0.9300 C11 N4 1.338(6) C11 H11 0.9300 C12 O5 1.195(5) C12 O6 1.328(6) C13 O6 1.467(6) C13 C14 1.473(8) C13 H13A 0.9700 C13 H13B 0.9700 C14 H14A 0.9600 C14 H14B 0.9600 C14 H14C 0.9600 N1 H1 0.8595 N4 H4A 0.8626 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N1 H1 O4 1_655 0.86 2.00 2.847(5) 170 yes C3 H3 N3 1_655 0.93 2.54 3.188(7) 127 yes N4 H4A O1 4 0.86 2.01 2.789(5) 151 yes C3 H3 O5 4 0.93 2.55 3.307(6) 139 yes C10 H10 O4 4 0.93 2.50 3.135(6) 125 yes C10 H10 O5 4_455 0.93 2.55 3.281(7) 136 yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C4 C1 C2 O1 179.9(5) C5 C1 C2 O1 0.7(7) C4 C1 C2 N1 -2.1(6) C5 C1 C2 N1 178.7(4) C2 C1 C4 N2 0.6(8) C5 C1 C4 N2 179.8(5) C4 C1 C5 O2 4.0(7) C2 C1 C5 O2 -176.8(5) C4 C1 C5 O3 -178.5(5) C2 C1 C5 O3 0.7(7) C11 C8 C9 O4 -178.7(5) C12 C8 C9 O4 0.2(7) C11 C8 C9 N3 1.6(6) C12 C8 C9 N3 -179.5(4) C9 C8 C11 N4 -0.3(7) C12 C8 C11 N4 -179.1(4) C11 C8 C12 O5 168.8(5) C9 C8 C12 O5 -10.0(7) C11 C8 C12 O6 -11.1(6) C9 C8 C12 O6 170.1(4) N2 C3 N1 C2 0.2(7) O1 C2 N1 C3 -179.9(5) C1 C2 N1 C3 1.9(6) N1 C3 N2 C4 -1.9(8) C1 C4 N2 C3 1.5(8) N4 C10 N3 C9 -1.2(8) O4 C9 N3 C10 179.3(4) C8 C9 N3 C10 -0.9(6) N3 C10 N4 C11 2.6(8) C8 C11 N4 C10 -1.8(7) O2 C5 O3 C6 -1.6(8) C1 C5 O3 C6 -179.1(5) C7 C6 O3 C5 -90.7(8) O5 C12 O6 C13 -1.4(7) C8 C12 O6 C13 178.6(4) C14 C13 O6 C12 177.9(5)