#------------------------------------------------------------------------------ #$Date: 2010-01-30 15:59:17 +0200 (Sat, 30 Jan 2010) $ #$Revision: 966 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/2212429.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2212429 _space_group_IT_number 4 _symmetry_space_group_name_Hall 'P 2yb' _symmetry_space_group_name_H-M 'P 1 21 1' _[local]_cod_cif_authors_sg_H-M 'P 21' loop_ _publ_author_name 'Juhl, Martin' 'Tanner, David' 'S\/otofte, Inger' _publ_section_title ;\ (1R,5R,6S)-6-(2-Hydroxyethyl)-2-methyl-5-(prop-1-en-2-yl)\ cyclohex-2-enol ; _journal_coeditor_code YM2046 _journal_issue 2 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first o836 _journal_page_last o837 _journal_volume 63 _journal_year 2007 _chemical_formula_iupac 'C12 H20 O2' _chemical_formula_moiety 'C12 H20 O2' _chemical_formula_sum 'C12 H20 O2' _chemical_formula_weight 196.28 _chemical_name_systematic ; (1R,5R,6S)-6-(2-Hydroxyethyl)-2-methyl-5-(prop-1-en-2-yl)cyclohex-2-enol ; _symmetry_cell_setting monoclinic _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 100.563(2) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 6.9388(6) _cell_length_b 6.7185(6) _cell_length_c 12.9422(11) _cell_measurement_reflns_used 4218 _cell_measurement_temperature 295(2) _cell_measurement_theta_max 27.99 _cell_measurement_theta_min 1.60 _cell_volume 593.12(9) _computing_cell_refinement 'SAINT (Bruker, 1998)' _computing_data_collection 'SMART (Bruker, 1998)' _computing_data_reduction SAINT _computing_molecular_graphics SHELXTL _computing_publication_material SHELXTL _computing_structure_refinement SHELXTL _computing_structure_solution 'SHELXTL (Sheldrick, 2001b)' _diffrn_ambient_temperature 295(2) _diffrn_measured_fraction_theta_full 0.99 _diffrn_measured_fraction_theta_max 0.99 _diffrn_measurement_device_type 'Bruker SMART 1K CCD area-detector' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'normal-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0174 _diffrn_reflns_av_sigmaI/netI 0.0232 _diffrn_reflns_limit_h_max 9 _diffrn_reflns_limit_h_min -8 _diffrn_reflns_limit_k_max 8 _diffrn_reflns_limit_k_min -8 _diffrn_reflns_limit_l_max 16 _diffrn_reflns_limit_l_min -17 _diffrn_reflns_number 4218 _diffrn_reflns_theta_full 27.9 _diffrn_reflns_theta_max 27.99 _diffrn_reflns_theta_min 1.60 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.073 _exptl_absorpt_correction_T_max 0.992 _exptl_absorpt_correction_T_min 0.889 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Sheldrick, 2001a)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.099 _exptl_crystal_density_method 'not measured' _exptl_crystal_description Block _exptl_crystal_F_000 216 _exptl_crystal_size_max 0.38 _exptl_crystal_size_mid 0.33 _exptl_crystal_size_min 0.24 _refine_diff_density_max 0.17 _refine_diff_density_min -0.24 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.08 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 127 _refine_ls_number_reflns 1536 _refine_ls_number_restraints 1 _refine_ls_restrained_S_all 1.08 _refine_ls_R_factor_all 0.050 _refine_ls_R_factor_gt 0.049 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.001 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0904P)^2^+0.0286P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.133 _refine_ls_wR_factor_ref 0.134 _reflns_number_gt 1449 _reflns_number_total 1536 _reflns_threshold_expression I>2/s(I) _[local]_cod_data_source_file ym2046.cif loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy O O1 0.3613(2) 0.1269(3) 0.56458(11) 0.0579(4) Uani d . 1 H H11 0.2774 0.0877 0.5158 0.069 Uiso calc R 1 O O2 -0.2962(3) 0.3104(4) 0.55797(18) 0.0955(9) Uani d . 1 H H21 -0.3938 0.2408 0.5561 0.115 Uiso calc R 1 C C1 0.3009(3) 0.0832(3) 0.66260(15) 0.0465(4) Uani d . 1 H H1 0.1917 -0.0114 0.6490 0.056 Uiso calc R 1 C C2 0.2259(3) 0.2780(3) 0.70185(14) 0.0437(4) Uani d . 1 H H2 0.3284 0.3780 0.7009 0.052 Uiso calc R 1 C C3 0.2017(3) 0.2541(3) 0.81787(14) 0.0474(4) Uani d . 1 H H3 0.1178 0.1378 0.8215 0.057 Uiso calc R 1 C C4 0.4030(3) 0.2085(4) 0.88542(17) 0.0619(6) Uani d . 1 H H41 0.4815 0.3289 0.8934 0.074 Uiso calc R 1 H H42 0.3854 0.1668 0.9548 0.074 Uiso calc R 1 C C5 0.5100(3) 0.0498(4) 0.83840(19) 0.0602(6) Uani d . 1 H H5 0.6150 -0.0112 0.8818 0.072 Uiso calc R 1 C C6 0.4665(3) -0.0112(3) 0.73917(18) 0.0533(5) Uani d . 1 C C7 0.0420(3) 0.3534(4) 0.62897(15) 0.0517(5) Uani d . 1 H H71 0.0122 0.4858 0.6514 0.062 Uiso calc R 1 H H72 0.0697 0.3642 0.5584 0.062 Uiso calc R 1 C C8 -0.1368(3) 0.2238(4) 0.62551(18) 0.0579(5) Uani d . 1 H H81 -0.1117 0.0920 0.6004 0.070 Uiso calc R 1 H H82 -0.1667 0.2109 0.6955 0.070 Uiso calc R 1 C C9 0.1058(3) 0.4295(4) 0.86050(16) 0.0548(5) Uani d . 1 C C10 -0.0519(4) 0.4052(5) 0.9040(2) 0.0764(8) Uani d . 1 H H101 -0.1078 0.5142 0.9316 0.092 Uiso calc R 1 H H102 -0.1064 0.2793 0.9068 0.092 Uiso calc R 1 C C11 0.1942(5) 0.6304(4) 0.8556(2) 0.0772(8) Uani d . 1 H H111 0.1040 0.7298 0.8709 0.116 Uiso calc R 1 H H112 0.2217 0.6525 0.7865 0.116 Uiso calc R 1 H H113 0.3137 0.6385 0.9063 0.116 Uiso calc R 1 C C12 0.5697(4) -0.1812(4) 0.6980(2) 0.0713(7) Uani d . 1 H H121 0.6739 -0.2274 0.7519 0.107 Uiso calc R 1 H H122 0.6231 -0.1376 0.6384 0.107 Uiso calc R 1 H H123 0.4785 -0.2875 0.6772 0.107 Uiso calc R 1 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.0555(8) 0.0716(10) 0.0482(7) -0.0111(8) 0.0136(6) -0.0049(7) O2 0.0482(9) 0.128(2) 0.1017(14) -0.0177(11) -0.0090(9) 0.0650(15) C1 0.0427(9) 0.0490(10) 0.0481(9) -0.0106(8) 0.0088(7) 0.0000(8) C2 0.0417(8) 0.0462(9) 0.0434(8) -0.0126(7) 0.0081(7) 0.0034(7) C3 0.0465(9) 0.0525(10) 0.0429(8) -0.0109(8) 0.0075(7) 0.0033(8) C4 0.0552(12) 0.0809(16) 0.0467(9) -0.0080(12) 0.0013(8) -0.0008(10) C5 0.0468(10) 0.0669(14) 0.0626(12) -0.0025(10) -0.0012(8) 0.0137(11) C6 0.0452(9) 0.0509(11) 0.0644(11) -0.0064(9) 0.0113(8) 0.0072(10) C7 0.0499(10) 0.0557(11) 0.0493(9) -0.0060(10) 0.0086(8) 0.0121(9) C8 0.0462(10) 0.0668(13) 0.0573(10) -0.0072(10) 0.0002(8) 0.0119(10) C9 0.0583(12) 0.0590(12) 0.0482(9) -0.0085(10) 0.0127(8) -0.0008(8) C10 0.0760(17) 0.0796(18) 0.0826(16) -0.0053(14) 0.0383(14) -0.0026(15) C11 0.095(2) 0.0612(14) 0.0811(16) -0.0208(15) 0.0310(15) -0.0142(13) C12 0.0675(14) 0.0579(14) 0.0909(17) 0.0042(12) 0.0210(13) 0.0065(12) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance O1 C1 1.437(2) O1 H11 0.8200 O2 C8 1.404(3) O2 H21 0.8200 C1 C6 1.512(3) C1 C2 1.529(3) C1 H1 0.9800 C2 C7 1.527(3) C2 C3 1.550(2) C2 H2 0.9800 C3 C9 1.507(3) C3 C4 1.537(3) C3 H3 0.9800 C4 C5 1.491(4) C4 H41 0.9700 C4 H42 0.9700 C5 C6 1.329(4) C5 H5 0.9300 C6 C12 1.498(4) C7 C8 1.509(3) C7 H71 0.9700 C7 H72 0.9700 C8 H81 0.9700 C8 H82 0.9700 C9 C10 1.329(3) C9 C11 1.489(4) C10 H101 0.9300 C10 H102 0.9300 C11 H111 0.9600 C11 H112 0.9600 C11 H113 0.9600 C12 H121 0.9600 C12 H122 0.9600 C12 H123 0.9600 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C1 O1 H11 109.5 C8 O2 H21 109.5 O1 C1 C6 110.77(16) O1 C1 C2 106.87(15) C6 C1 C2 113.90(16) O1 C1 H1 108.4 C6 C1 H1 108.4 C2 C1 H1 108.4 C7 C2 C1 112.04(16) C7 C2 C3 113.95(16) C1 C2 C3 109.70(15) C7 C2 H2 106.9 C1 C2 H2 106.9 C3 C2 H2 106.9 C9 C3 C4 111.33(18) C9 C3 C2 114.04(17) C4 C3 C2 108.84(17) C9 C3 H3 107.4 C4 C3 H3 107.4 C2 C3 H3 107.4 C5 C4 C3 112.25(18) C5 C4 H41 109.2 C3 C4 H41 109.2 C5 C4 H42 109.2 C3 C4 H42 109.2 H41 C4 H42 107.9 C6 C5 C4 125.0(2) C6 C5 H5 117.5 C4 C5 H5 117.5 C5 C6 C12 122.7(2) C5 C6 C1 121.0(2) C12 C6 C1 116.2(2) C8 C7 C2 114.59(17) C8 C7 H71 108.6 C2 C7 H71 108.6 C8 C7 H72 108.6 C2 C7 H72 108.6 H71 C7 H72 107.6 O2 C8 C7 109.2(2) O2 C8 H81 109.8 C7 C8 H81 109.8 O2 C8 H82 109.8 C7 C8 H82 109.8 H81 C8 H82 108.3 C10 C9 C11 120.4(3) C10 C9 C3 120.8(2) C11 C9 C3 118.75(19) C9 C10 H101 120.0 C9 C10 H102 120.0 H101 C10 H102 120.0 C9 C11 H111 109.5 C9 C11 H112 109.5 H111 C11 H112 109.5 C9 C11 H113 109.5 H111 C11 H113 109.5 H112 C11 H113 109.5 C6 C12 H121 109.5 C6 C12 H122 109.5 H121 C12 H122 109.5 C6 C12 H123 109.5 H121 C12 H123 109.5 H122 C12 H123 109.5 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion O1 C1 C2 C7 64.91(18) C6 C1 C2 C7 -172.42(16) O1 C1 C2 C3 -167.48(14) C6 C1 C2 C3 -44.8(2) C7 C2 C3 C9 -46.6(2) C1 C2 C3 C9 -173.13(16) C7 C2 C3 C4 -171.56(19) C1 C2 C3 C4 61.9(2) C9 C3 C4 C5 -173.83(18) C2 C3 C4 C5 -47.3(3) C3 C4 C5 C6 16.6(3) C4 C5 C6 C12 -175.5(2) C4 C5 C6 C1 1.4(4) O1 C1 C6 C5 133.9(2) C2 C1 C6 C5 13.4(3) O1 C1 C6 C12 -48.9(2) C2 C1 C6 C12 -169.42(17) C1 C2 C7 C8 66.8(2) C3 C2 C7 C8 -58.5(3) C2 C7 C8 O2 178.8(2) C4 C3 C9 C10 -110.6(3) C2 C3 C9 C10 125.7(2) C4 C3 C9 C11 67.8(3) C2 C3 C9 C11 -55.8(3) loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA O1 H11 O2 2_546 0.82 2.11 2.641(3) 122.6 O2 H21 O1 1_455 0.82 1.89 2.693(2) 168.1 _cod_database_code 2212429