#------------------------------------------------------------------------------ #$Date: 2008-04-03 13:11:48 +0300 (Thu, 03 Apr 2008) $ #$Revision: 326 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/2216069.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2216069 loop_ _publ_author_name 'Sejer Pedersen, Daniel' 'Taylor, Dennis K.' 'Tiekink, Edward R. T.' _publ_section_title ; tert-Butyl N-(3,6-dihydro-1,2-dioxin-4-ylmethyl)carbamate ; _journal_coeditor_code NG2332 _journal_issue 11 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first o4301 _journal_page_last o4301 _journal_volume 63 _journal_year 2007 _chemical_formula_iupac 'C10 H17 N O4' _chemical_formula_moiety 'C10 H17 N O4' _chemical_formula_sum 'C10 H17 N O4' _chemical_formula_weight 215.25 _chemical_name_systematic ; tert-Butyl N-(3,6-dihydro-1,2-dioxin-4-ylmethyl)carbamate ; _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'P 2ac 2ab' _symmetry_space_group_name_H-M 'P 21 21 21' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90 _cell_angle_beta 90 _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 9.435(4) _cell_length_b 9.628(4) _cell_length_c 12.698(6) _cell_measurement_reflns_used 4236 _cell_measurement_temperature 120(2) _cell_measurement_theta_max 30.4 _cell_measurement_theta_min 2.2 _cell_volume 1153.6(9) _computing_cell_refinement 'CrystalClear (Rigaku Americas Corporation, 2005)' _computing_data_collection 'CrystalClear (Rigaku Americas Corporation, 2005)' _computing_data_reduction 'CrystalClear (Rigaku Americas Corporation, 2005)' _computing_molecular_graphics 'ORTEPII (Johnson, 1976) and DIAMOND (Brandenburg, 2006)' _computing_publication_material 'SHELXL97 (Sheldrick, 1997)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SIR92 (Altomare et al., 1994)' _diffrn_ambient_temperature 120(2) _diffrn_measured_fraction_theta_full 0.991 _diffrn_measured_fraction_theta_max 0.991 _diffrn_measurement_device_type 'Rigaku AFC12\k/SATURN724' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71070 _diffrn_reflns_av_R_equivalents 0.027 _diffrn_reflns_av_sigmaI/netI 0.012 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min -10 _diffrn_reflns_limit_k_max 12 _diffrn_reflns_limit_k_min -10 _diffrn_reflns_limit_l_max 15 _diffrn_reflns_limit_l_min -15 _diffrn_reflns_number 11678 _diffrn_reflns_theta_full 26.5 _diffrn_reflns_theta_max 26.5 _diffrn_reflns_theta_min 2.7 _diffrn_standards_decay_% '< 1' _diffrn_standards_interval_count 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.095 _exptl_absorpt_correction_type none _exptl_crystal_colour Colorless _exptl_crystal_density_diffrn 1.239 _exptl_crystal_density_method 'not measured' _exptl_crystal_description Prism _exptl_crystal_F_000 464 _exptl_crystal_size_max 0.40 _exptl_crystal_size_mid 0.40 _exptl_crystal_size_min 0.10 _refine_diff_density_max 0.14 _refine_diff_density_min -0.16 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.07 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 145 _refine_ls_number_reflns 1369 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.07 _refine_ls_R_factor_all 0.039 _refine_ls_R_factor_gt 0.038 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0581P)^2^+0.2125P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.099 _refine_ls_wR_factor_ref 0.100 _reflns_number_gt 1347 _reflns_number_total 1369 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file ng2332.cif loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' 'x+1/2, -y+1/2, -z' '-x, y+1/2, -z+1/2' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group O O3 0.45338(14) 0.52172(13) 0.69574(12) 0.0403(3) Uani d . 1 . . O O4 0.33495(14) 0.72768(13) 0.68622(11) 0.0370(3) Uani d . 1 . . C C3 0.8147(3) 0.6760(3) 1.05230(18) 0.0568(6) Uani d P 0.706(5) A 1 H H3A 0.8892 0.6070 1.0690 0.068 Uiso calc PR 0.706(5) A 1 H H3B 0.8385 0.7636 1.0891 0.068 Uiso calc PR 0.706(5) A 1 C C4 0.6062(2) 0.5477(2) 0.92708(15) 0.0393(4) Uani d P 0.706(5) A 1 H H4A 0.5147 0.5971 0.9347 0.047 Uiso calc PR 0.706(5) A 1 H H4B 0.5905 0.4671 0.8801 0.047 Uiso calc PR 0.706(5) A 1 O O1 0.6742(3) 0.6237(2) 1.09082(16) 0.0500(8) Uani d P 0.706(5) A 1 O O2 0.6513(2) 0.4980(2) 1.02975(15) 0.0429(7) Uani d P 0.706(5) A 1 C C3A 0.8147(3) 0.6760(3) 1.05230(18) 0.0568(6) Uani d P 0.294(5) A 2 H H3C 0.9137 0.6753 1.0782 0.068 Uiso calc PR 0.294(5) A 2 H H3D 0.7621 0.7501 1.0896 0.068 Uiso calc PR 0.294(5) A 2 C C4A 0.6062(2) 0.5477(2) 0.92708(15) 0.0393(4) Uani d P 0.294(5) A 2 H H4C 0.5113 0.5591 0.8949 0.047 Uiso calc PR 0.294(5) A 2 H H4D 0.6361 0.4497 0.9199 0.047 Uiso calc PR 0.294(5) A 2 O O1A 0.7525(6) 0.5504(6) 1.0696(4) 0.0480(18) Uiso d P 0.294(5) A 2 O O2A 0.6048(6) 0.5901(6) 1.0373(4) 0.0443(16) Uiso d P 0.294(5) A 2 N N1 0.56110(16) 0.72726(15) 0.73168(12) 0.0330(3) Uani d . 1 . . H H1 0.5514 0.8181 0.7329 0.040 Uiso calc R 1 . . C C1 0.71146(19) 0.64320(18) 0.87711(14) 0.0317(4) Uani d . 1 . . C C2 0.8118(2) 0.7010(2) 0.93588(16) 0.0402(5) Uani d . 1 A . H H2 0.8817 0.7582 0.9041 0.048 Uiso calc R 1 B 1 C C5 0.69754(18) 0.6658(2) 0.76017(14) 0.0336(4) Uani d . 1 A . H H5A 0.7748 0.7278 0.7360 0.040 Uiso calc R 1 . . H H5B 0.7083 0.5757 0.7235 0.040 Uiso calc R 1 . . C C6 0.45012(19) 0.64797(18) 0.70358(13) 0.0314(4) Uani d . 1 . . C C7 0.2026(2) 0.6673(2) 0.64337(17) 0.0412(5) Uani d . 1 . . C C8 0.1393(2) 0.5642(2) 0.7209(2) 0.0512(6) Uani d . 1 . . H H8A 0.2016 0.4832 0.7268 0.077 Uiso calc R 1 . . H H8B 0.0458 0.5347 0.6960 0.077 Uiso calc R 1 . . H H8C 0.1298 0.6084 0.7901 0.077 Uiso calc R 1 . . C C9 0.1067(2) 0.7929(3) 0.6341(3) 0.0623(7) Uani d . 1 . . H H9A 0.0893 0.8317 0.7042 0.093 Uiso calc R 1 . . H H9B 0.0164 0.7651 0.6022 0.093 Uiso calc R 1 . . H H9C 0.1523 0.8632 0.5897 0.093 Uiso calc R 1 . . C C10 0.2326(3) 0.6033(3) 0.53635(19) 0.0593(7) Uani d . 1 . . H H10A 0.2947 0.5225 0.5450 0.089 Uiso calc R 1 . . H H10B 0.2792 0.6721 0.4912 0.089 Uiso calc R 1 . . H H10C 0.1433 0.5740 0.5038 0.089 Uiso calc R 1 . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O3 0.0397(7) 0.0282(7) 0.0530(8) -0.0002(5) -0.0028(6) -0.0033(6) O4 0.0308(6) 0.0281(6) 0.0521(7) -0.0014(5) -0.0070(6) -0.0002(6) C3 0.0668(15) 0.0525(13) 0.0513(12) -0.0174(13) -0.0236(12) 0.0077(10) C4 0.0340(9) 0.0463(11) 0.0376(9) -0.0043(8) -0.0034(8) 0.0026(8) O1 0.0606(15) 0.0528(14) 0.0366(10) -0.0119(12) 0.0015(11) -0.0054(9) O2 0.0519(12) 0.0383(12) 0.0384(10) -0.0098(10) -0.0043(9) 0.0065(8) C3A 0.0668(15) 0.0525(13) 0.0513(12) -0.0174(13) -0.0236(12) 0.0077(10) C4A 0.0340(9) 0.0463(11) 0.0376(9) -0.0043(8) -0.0034(8) 0.0026(8) N1 0.0326(8) 0.0274(7) 0.0390(8) -0.0008(6) -0.0047(6) 0.0008(6) C1 0.0297(8) 0.0268(8) 0.0386(9) 0.0035(7) -0.0015(7) -0.0013(7) C2 0.0384(10) 0.0337(9) 0.0484(10) -0.0047(9) -0.0084(9) 0.0022(8) C5 0.0274(8) 0.0344(9) 0.0391(9) -0.0002(7) 0.0009(7) 0.0005(7) C6 0.0330(9) 0.0282(8) 0.0329(8) -0.0008(7) -0.0008(7) 0.0002(7) C7 0.0292(9) 0.0395(10) 0.0551(11) -0.0065(8) -0.0074(9) 0.0022(9) C8 0.0383(10) 0.0475(12) 0.0677(14) -0.0083(9) 0.0038(10) 0.0065(11) C9 0.0337(10) 0.0512(13) 0.102(2) -0.0017(11) -0.0148(12) 0.0145(14) C10 0.0469(12) 0.0782(18) 0.0527(12) -0.0201(13) -0.0100(10) -0.0062(12) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance O3 C6 1.220(2) O4 C6 1.349(2) O4 C7 1.481(2) C3 O1 1.500(4) C3 C2 1.498(3) C3 H3A 0.9900 C3 H3B 0.9900 C4 O2 1.453(3) C4 C1 1.495(3) C4 H4A 0.9900 C4 H4B 0.9900 O1 O2 1.454(3) C3A O1A 1.362(6) C3A C2 1.498(3) C3A H3C 0.9900 C3A H3D 0.9900 C4A O2A 1.458(6) C4A C1 1.495(3) C4A H4C 0.9900 C4A H4D 0.9900 O1A O2A 1.502(8) N1 C6 1.344(2) N1 C5 1.462(2) N1 H1 0.8800 C1 C2 1.327(3) C1 C5 1.507(3) C2 H2 0.9500 C5 H5A 0.9900 C5 H5B 0.9900 C7 C9 1.515(3) C7 C10 1.519(3) C7 C8 1.520(3) C8 H8A 0.9800 C8 H8B 0.9800 C8 H8C 0.9800 C9 H9A 0.9800 C9 H9B 0.9800 C9 H9C 0.9800 C10 H10A 0.9800 C10 H10B 0.9800 C10 H10C 0.9800 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C6 O4 C7 121.07(14) O1 C3 C2 111.0(2) O1 C3 H3A 109.4 C2 C3 H3A 109.4 O1 C3 H3B 109.4 C2 C3 H3B 109.4 H3A C3 H3B 108.0 O2 C4 C1 112.89(17) O2 C4 H4A 109.0 C1 C4 H4A 109.0 O2 C4 H4B 109.0 C1 C4 H4B 109.0 H4A C4 H4B 107.8 O2 O1 C3 103.7(2) C4 O2 O1 104.33(18) O1A C3A C2 107.1(3) O1A C3A H3C 110.3 C2 C3A H3C 110.3 O1A C3A H3D 110.3 C2 C3A H3D 110.3 H3C C3A H3D 108.6 O2A C4A C1 104.0(3) O2A C4A H4C 111.0 C1 C4A H4C 111.0 O2A C4A H4D 111.0 C1 C4A H4D 111.0 H4C C4A H4D 109.0 C3A O1A O2A 97.5(4) C4A O2A O1A 100.5(4) C6 N1 C5 121.46(14) C6 N1 H1 119.3 C5 N1 H1 119.3 C2 C1 C4 119.53(17) C2 C1 C4A 119.53(17) C2 C1 C5 123.74(18) C4 C1 C5 116.71(16) C4A C1 C5 116.71(16) C1 C2 C3 120.0(2) C1 C2 C3A 120.0(2) C1 C2 H2 120.0 C3 C2 H2 120.0 C3A C2 H2 120.0 N1 C5 C1 112.28(15) N1 C5 H5A 109.1 C1 C5 H5A 109.1 N1 C5 H5B 109.1 C1 C5 H5B 109.1 H5A C5 H5B 107.9 O3 C6 N1 124.61(17) O3 C6 O4 125.03(17) N1 C6 O4 110.36(14) O4 C7 C9 102.64(17) O4 C7 C10 109.30(17) C9 C7 C10 111.4(2) O4 C7 C8 110.44(17) C9 C7 C8 109.71(19) C10 C7 C8 112.8(2) C7 C8 H8A 109.5 C7 C8 H8B 109.5 H8A C8 H8B 109.5 C7 C8 H8C 109.5 H8A C8 H8C 109.5 H8B C8 H8C 109.5 C7 C9 H9A 109.5 C7 C9 H9B 109.5 H9A C9 H9B 109.5 C7 C9 H9C 109.5 H9A C9 H9C 109.5 H9B C9 H9C 109.5 C7 C10 H10A 109.5 C7 C10 H10B 109.5 H10A C10 H10B 109.5 C7 C10 H10C 109.5 H10A C10 H10C 109.5 H10B C10 H10C 109.5 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C2 C3 O1 O2 58.0(2) C1 C4 O2 O1 57.4(2) C3 O1 O2 C4 -77.6(2) C2 C3A O1A O2A -67.3(4) C1 C4A O2A O1A -66.0(4) C3A O1A O2A C4A 93.9(4) O2 C4 C1 C2 -16.9(3) O2 C4 C1 C4A 0(11) O2 C4 C1 C5 162.06(17) O2A C4A C1 C2 24.3(3) O2A C4A C1 C4 0E1(4) O2A C4A C1 C5 -156.7(3) C4 C1 C2 C3 -3.0(3) C4A C1 C2 C3 -3.0(3) C5 C1 C2 C3 178.1(2) C4 C1 C2 C3A -3.0(3) C4A C1 C2 C3A -3.0(3) C5 C1 C2 C3A 178.1(2) O1 C3 C2 C1 -18.2(3) O1 C3 C2 C3A 0E1(10) O1A C3A C2 C1 27.2(4) O1A C3A C2 C3 0E1(10) C6 N1 C5 C1 -93.6(2) C2 C1 C5 N1 -120.2(2) C4 C1 C5 N1 60.9(2) C4A C1 C5 N1 60.9(2) C5 N1 C6 O3 -2.6(3) C5 N1 C6 O4 176.90(14) C7 O4 C6 O3 -7.0(3) C7 O4 C6 N1 173.47(15) C6 O4 C7 C9 -178.27(18) C6 O4 C7 C10 -59.9(2) C6 O4 C7 C8 64.8(2) loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N1 H1 O3 4_656 0.88 2.16 2.984(2) 156 y C3 H3A O3 2_665 0.99 2.52 3.425(3) 152 y C4 H4B O4 4_646 0.99 2.55 3.446(3) 150 y