#------------------------------------------------------------------------------ #$Date: 2010-01-30 15:59:17 +0200 (Sat, 30 Jan 2010) $ #$Revision: 966 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/2216653.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2216653 _space_group_IT_number 14 _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _[local]_cod_cif_authors_sg_H-M 'P 21/n' _[local]_cod_cif_authors_sg_Hall -P_2yn loop_ _publ_author_name 'Su, Kun-Mei' 'Li, Zhen-huan' _publ_section_title ; Piperazindiium bis(3,4,5-trihydroxybenzoate) dihydrate ; _journal_coeditor_code LX2020 _journal_issue 12 _journal_name_full 'Acta Crystallographica, Section E' _journal_page_first o4512 _journal_page_last o4512 _journal_volume 63 _journal_year 2007 _chemical_formula_iupac 'C4 H12 N2 2+, 2C7 H5 O5 -, 2H2 O' _chemical_formula_moiety 'C4 H12 N2 2+, 2(C7 H5 O5 -), 2(H2 O)' _chemical_formula_sum 'C18 H26 N2 O12' _chemical_formula_weight 462.41 _chemical_name_systematic ; Piperazindiium bis(3,4,5-trihydroxybenzoate) dihydrate ; _symmetry_cell_setting monoclinic _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 106.516(3) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 8.197(2) _cell_length_b 9.449(2) _cell_length_c 12.655(2) _cell_measurement_reflns_used 2556 _cell_measurement_temperature 294(2) _cell_measurement_theta_max 26.36 _cell_measurement_theta_min 2.73 _cell_volume 939.7(3) _computing_cell_refinement 'SAINT (Bruker, 2000)' _computing_data_collection 'SMART (Bruker, 2000)' _computing_data_reduction 'SAINT (Bruker, 2000)' _computing_molecular_graphics 'SHELXTL (Sheldrick, 2001)' _computing_publication_material 'SHELXTL (Sheldrick, 2001)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1990)' _diffrn_ambient_temperature 294(2) _diffrn_detector_area_resol_mean 10.0 _diffrn_measured_fraction_theta_full 0.999 _diffrn_measured_fraction_theta_max 0.999 _diffrn_measurement_device_type 'Bruker SMART CCD area-detector' _diffrn_measurement_method '\f and \w' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0277 _diffrn_reflns_av_sigmaI/netI 0.0279 _diffrn_reflns_limit_h_max 9 _diffrn_reflns_limit_h_min -10 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 15 _diffrn_reflns_limit_l_min -11 _diffrn_reflns_number 5263 _diffrn_reflns_theta_full 26.37 _diffrn_reflns_theta_max 26.37 _diffrn_reflns_theta_min 2.66 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.139 _exptl_absorpt_correction_type none _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.634 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 488 _exptl_crystal_size_max 0.20 _exptl_crystal_size_mid 0.16 _exptl_crystal_size_min 0.12 _refine_diff_density_max 0.225 _refine_diff_density_min -0.419 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.096 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 161 _refine_ls_number_reflns 1922 _refine_ls_number_restraints 4 _refine_ls_restrained_S_all 1.095 _refine_ls_R_factor_all 0.0477 _refine_ls_R_factor_gt 0.0389 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0541P)^2^+0.3692P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1010 _refine_ls_wR_factor_ref 0.1074 _reflns_number_gt 1591 _reflns_number_total 1922 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file lx2020.cif loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, -y-1/2, z-1/2' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy O O1 0.58286(17) 0.49827(12) 0.69747(9) 0.0276(3) Uani d . 1 O O2 0.53936(15) 0.33368(12) 0.81110(9) 0.0270(3) Uani d . 1 O O3 0.83718(16) 0.49981(12) 1.19238(9) 0.0279(3) Uani d D 1 H H3 0.7719 0.4333 1.1896 0.042 Uiso calc RD 1 O O4 1.02059(15) 0.72094(12) 1.17301(9) 0.0277(3) Uani d . 1 H H4 1.0744 0.7876 1.1583 0.042 Uiso calc R 1 O O5 1.02560(14) 0.82015(12) 0.96955(9) 0.0249(3) Uani d . 1 H H5 1.0160 0.8417 0.9053 0.037 Uiso calc R 1 O O6 0.2251(2) 0.26564(15) 0.68561(10) 0.0325(3) Uani d D 1 H H6A 0.325(4) 0.295(3) 0.717(2) 0.067(9) Uiso d D 1 H H6B 0.161(3) 0.282(3) 0.724(2) 0.064(8) Uiso d D 1 N N 0.58220(17) 0.12224(14) 0.97017(12) 0.0215(3) Uani d . 1 H H1A 0.651(2) 0.151(2) 1.0349(18) 0.030(5) Uiso d . 1 H H1B 0.592(3) 0.186(2) 0.9169(19) 0.042(6) Uiso d . 1 C C1 0.6055(2) 0.44903(16) 0.79314(12) 0.0196(3) Uani d . 1 C C2 0.71553(19) 0.52807(16) 0.89041(12) 0.0179(3) Uani d . 1 C C3 0.7195(2) 0.48134(16) 0.99537(12) 0.0194(3) Uani d . 1 H H3A 0.6495 0.4071 1.0033 0.023 Uiso calc R 1 C C4 0.8266(2) 0.54420(16) 1.08790(12) 0.0187(3) Uani d . 1 C C5 0.92582(19) 0.65932(16) 1.07747(12) 0.0185(3) Uani d . 1 C C6 0.92217(19) 0.70748(16) 0.97240(13) 0.0179(3) Uani d . 1 C C7 0.81769(19) 0.64194(16) 0.87896(12) 0.0186(3) Uani d . 1 H H7 0.8160 0.6739 0.8092 0.022 Uiso calc R 1 C C8 0.6298(2) -0.02284(17) 0.94383(14) 0.0257(4) Uani d . 1 H H8A 0.7493 -0.0248 0.9467 0.031 Uiso calc R 1 H H8B 0.5638 -0.0484 0.8698 0.031 Uiso calc R 1 C C9 0.4030(2) 0.12800(18) 0.97492(15) 0.0268(4) Uani d . 1 H H9A 0.3271 0.1084 0.9023 0.032 Uiso calc R 1 H H9B 0.3784 0.2226 0.9959 0.032 Uiso calc R 1 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.0437(7) 0.0207(6) 0.0155(6) -0.0033(5) 0.0037(5) 0.0001(4) O2 0.0343(7) 0.0218(6) 0.0215(6) -0.0079(5) 0.0024(5) 0.0016(5) O3 0.0448(8) 0.0233(6) 0.0148(6) -0.0069(5) 0.0072(5) 0.0005(4) O4 0.0376(7) 0.0228(6) 0.0180(6) -0.0087(5) 0.0002(5) -0.0020(5) O5 0.0268(6) 0.0243(6) 0.0210(6) -0.0077(5) 0.0026(5) 0.0036(5) O6 0.0358(8) 0.0343(7) 0.0252(7) 0.0079(6) 0.0050(6) -0.0087(5) N 0.0236(7) 0.0196(7) 0.0214(7) -0.0013(5) 0.0067(6) 0.0028(6) C1 0.0221(8) 0.0173(7) 0.0191(7) 0.0017(6) 0.0053(6) 0.0001(6) C2 0.0183(7) 0.0171(7) 0.0174(7) 0.0020(6) 0.0034(6) -0.0011(6) C3 0.0231(8) 0.0155(7) 0.0197(8) -0.0005(6) 0.0065(6) 0.0007(6) C4 0.0240(8) 0.0171(7) 0.0150(7) 0.0043(6) 0.0057(6) 0.0012(6) C5 0.0198(7) 0.0165(7) 0.0167(7) 0.0032(6) 0.0011(6) -0.0028(6) C6 0.0158(7) 0.0153(7) 0.0224(8) 0.0022(6) 0.0052(6) 0.0014(6) C7 0.0206(7) 0.0200(8) 0.0154(7) 0.0029(6) 0.0056(6) 0.0025(6) C8 0.0250(8) 0.0244(8) 0.0311(9) 0.0010(7) 0.0135(7) -0.0023(7) C9 0.0234(8) 0.0217(8) 0.0351(9) 0.0074(7) 0.0082(7) 0.0051(7) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance O1 C1 . 1.261(2) O2 C1 . 1.266(2) O3 C4 . 1.366(2) O3 H3 . 0.8200 O4 C5 . 1.368(2) O4 H4 . 0.8200 O5 C6 . 1.368(2) O5 H5 . 0.8200 O6 H6A . 0.85(3) O6 H6B . 0.83(3) N C9 . 1.488(2) N C8 . 1.489(2) N H1A . 0.89(2) N H1B . 0.92(2) C1 C2 . 1.502(2) C2 C3 . 1.391(2) C2 C7 . 1.396(2) C3 C4 . 1.382(2) C3 H3A . 0.9300 C4 C5 . 1.387(2) C5 C6 . 1.398(2) C6 C7 . 1.393(2) C7 H7 . 0.9300 C8 C9 3_657 1.508(2) C8 H8A . 0.9700 C8 H8B . 0.9700 C9 C8 3_657 1.508(2) C9 H9A . 0.9700 C9 H9B . 0.9700 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle C4 O3 H3 . . 109.5 C5 O4 H4 . . 109.5 C6 O5 H5 . . 109.5 H6A O6 H6B . . 111(3) C9 N C8 . . 111.60(10) C9 N H1A . . 109.0(10) C8 N H1A . . 110.0(10) C9 N H1B . . 107.0(10) C8 N H1B . . 111.0(10) H1A N H1B . . 108(2) O1 C1 O2 . . 122.40(10) O1 C1 C2 . . 119.60(10) O2 C1 C2 . . 118.00(10) C3 C2 C7 . . 119.60(10) C3 C2 C1 . . 118.10(10) C7 C2 C1 . . 122.50(10) C4 C3 C2 . . 120.6(2) C4 C3 H3A . . 119.7 C2 C3 H3A . . 119.7 O3 C4 C3 . . 122.60(10) O3 C4 C5 . . 117.10(10) C3 C4 C5 . . 120.30(10) O4 C5 C4 . . 116.80(10) O4 C5 C6 . . 123.80(10) C4 C5 C6 . . 119.40(10) O5 C6 C7 . . 124.10(10) O5 C6 C5 . . 115.60(10) C7 C6 C5 . . 120.30(10) C6 C7 C2 . . 119.80(10) C6 C7 H7 . . 120.1 C2 C7 H7 . . 120.1 N C8 C9 . 3_657 110.17(13) N C8 H8A . . 109.6 C9 C8 H8A 3_657 . 109.6 N C8 H8B . . 109.6 C9 C8 H8B 3_657 . 109.6 H8A C8 H8B . . 108.1 N C9 C8 . 3_657 111.90(13) N C9 H9A . . 109.2 C8 C9 H9A 3_657 . 109.2 N C9 H9B . . 109.2 C8 C9 H9B 3_657 . 109.2 H9A C9 H9B . . 107.9 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_4 _geom_torsion O1 C1 C2 C3 . 171.50(14) O2 C1 C2 C3 . -8.9(2) O1 C1 C2 C7 . -11.1(2) O2 C1 C2 C7 . 168.51(14) C7 C2 C3 C4 . -1.7(2) C1 C2 C3 C4 . 175.86(14) C2 C3 C4 O3 . -178.62(14) C2 C3 C4 C5 . 3.1(2) O3 C4 C5 O4 . -2.3(2) C3 C4 C5 O4 . 176.13(14) O3 C4 C5 C6 . 178.85(13) C3 C4 C5 C6 . -2.8(2) O4 C5 C6 O5 . 2.1(2) C4 C5 C6 O5 . -179.08(13) O4 C5 C6 C7 . -177.75(14) C4 C5 C6 C7 . 1.1(2) O5 C6 C7 C2 . -179.52(13) C5 C6 C7 C2 . 0.3(2) C3 C2 C7 C6 . 0.0(2) C1 C2 C7 C6 . -177.44(14) C9 N C8 C9 3_657 -55.1(2) C8 N C9 C8 3_657 56.0(2) loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA O3 H3 O6 4_666 0.82 1.92 2.664(2) 151.2 O4 H4 O1 4_676 0.82 2.08 2.703(2) 132.6 O5 H5 O1 2_656 0.82 1.98 2.650(2) 137.8 O6 H6A O2 . 0.85(3) 1.85(3) 2.691(2) 167(3) O6 H6B O3 3_667 0.83(3) 2.31(3) 2.829(2) 121(2) O6 H6B O4 3_667 0.83(3) 2.23(3) 3.054(2) 169(3) N H1B O2 . 0.92(2) 1.90(2) 2.787(2) 161(2) N H1A O6 4_666 0.89(2) 1.99(2) 2.848(2) 160.0(17) _cod_database_code 2216653