#------------------------------------------------------------------------------ #$Date: 2013-12-28 15:58:47 +0200 (Sat, 28 Dec 2013) $ #$Revision: 91933 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/21/66/2216671.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2216671 loop_ _publ_author_name 'Di-Chang Zhong' 'Gui-Quan Guo' 'Ji-Hua Deng' 'Rong-Hua Zhu' 'Yi-Bin Zhou' _publ_section_title Bis(2-aminopyridine-\kN^1^)bis(benzoato-\k^2^O,O')cadmium(II) _journal_coeditor_code NC2078 _journal_issue 12 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first m3091 _journal_page_last m3092 _journal_volume 63 _journal_year 2007 _chemical_formula_iupac '[Cd (C7 H5 O2)2 (C5 H6 N2)2]' _chemical_formula_moiety 'C24 H22 Cd N4 O4' _chemical_formula_sum 'C24 H22 Cd N4 O4' _chemical_formula_weight 542.86 _chemical_name_systematic ; Bis(2-aminopyridine-\kN^1^)bis(benzoato-\kO^2^)cadmium(II) ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 96.1090(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 9.1226(9) _cell_length_b 11.4153(11) _cell_length_c 22.520(2) _cell_measurement_temperature 296(2) _cell_measurement_theta_max 27.69 _cell_measurement_theta_min 2.33 _cell_volume 2331.9(4) _computing_cell_refinement 'SMART (Bruker, 2004)' _computing_data_collection 'SMART (Bruker, 2004)' _computing_data_reduction 'SAINT (Bruker, 2004)' _computing_molecular_graphics 'SHELXTL (Sheldrick, 1997b)' _computing_publication_material 'SHELXTL(Sheldrick, 1997b)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997a)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997a)' _diffrn_ambient_temperature 296(2) _diffrn_measured_fraction_theta_full 0.993 _diffrn_measured_fraction_theta_max 0.993 _diffrn_measurement_device_type 'Bruker SMART CCD area-detector' _diffrn_measurement_method 'phi and omega scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0204 _diffrn_reflns_av_sigmaI/netI 0.0183 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min -11 _diffrn_reflns_limit_k_max 14 _diffrn_reflns_limit_k_min -14 _diffrn_reflns_limit_l_max 28 _diffrn_reflns_limit_l_min -29 _diffrn_reflns_number 20104 _diffrn_reflns_theta_full 27.72 _diffrn_reflns_theta_max 27.72 _diffrn_reflns_theta_min 1.82 _diffrn_standards_decay_% 0 _diffrn_standards_interval_time 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.974 _exptl_absorpt_correction_T_max 0.758 _exptl_absorpt_correction_T_min 0.672 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Sheldrick, 1996)' _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.546 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 1096 _exptl_crystal_size_max 0.42 _exptl_crystal_size_mid 0.36 _exptl_crystal_size_min 0.28 _refine_diff_density_max 0.236 _refine_diff_density_min -0.557 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.040 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 298 _refine_ls_number_reflns 5418 _refine_ls_number_restraints 276 _refine_ls_restrained_S_all 1.097 _refine_ls_R_factor_all 0.0265 _refine_ls_R_factor_gt 0.0221 _refine_ls_shift/su_max 0.022 _refine_ls_shift/su_mean 0.002 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0259P)^2^+0.8501P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0546 _refine_ls_wR_factor_ref 0.0574 _reflns_number_gt 4817 _reflns_number_total 5418 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file nc2078.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M 'P 21/n' _[local]_cod_cif_authors_sg_Hall '-P 2yn ' _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. '_geom_hbond_publ_flag' value 'Y' changed to 'y' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (3 times). Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. '_geom_hbond_publ_flag' value 'Y' changed to 'y' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (3 times). Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_original_cell_volume 2331.8(4) _cod_database_code 2216671 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, -y-1/2, z-1/2' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy Cd Cd1 0.308844(14) 0.551275(12) 0.124286(5) 0.03915(5) Uani d . 1 O O1 0.56299(16) 0.48583(14) 0.14239(6) 0.0541(3) Uani d . 1 O O2 0.47033(17) 0.59585(17) 0.20791(7) 0.0656(4) Uani d . 1 O O3 0.15943(18) 0.42390(12) 0.05863(6) 0.0517(3) Uani d . 1 O O4 0.24832(18) 0.35974(13) 0.14697(7) 0.0581(4) Uani d . 1 N N1 0.38419(17) 0.67576(14) 0.05352(6) 0.0406(3) Uani d . 1 N N2 0.3290(2) 0.55339(14) -0.02765(7) 0.0490(4) Uani d . 1 H H2A 0.2774 0.5107 -0.0063 0.059 Uiso calc R 1 H H2B 0.3365 0.5348 -0.0642 0.059 Uiso calc R 1 N N3 0.11118(17) 0.65797(14) 0.14799(7) 0.0416(3) Uani d . 1 N N4 0.2241(2) 0.73593(19) 0.23601(8) 0.0658(5) Uani d . 1 H H4A 0.3047 0.7018 0.2293 0.079 Uiso calc R 1 H H4B 0.2211 0.7777 0.2677 0.079 Uiso calc R 1 C C1 0.1026(2) 0.72404(16) 0.19711(8) 0.0442(4) Uani d U 1 C C2 -0.0298(2) 0.78070(18) 0.20682(10) 0.0537(5) Uani d U 1 H H2 -0.0352 0.8247 0.2413 0.064 Uiso calc R 1 C C3 -0.1490(2) 0.77110(19) 0.16603(11) 0.0581(5) Uani d U 1 H H3 -0.2365 0.8088 0.1722 0.070 Uiso calc R 1 C C4 -0.1403(2) 0.7043(2) 0.11449(11) 0.0573(5) Uani d U 1 H H4 -0.2206 0.6976 0.0856 0.069 Uiso calc R 1 C C5 -0.0104(2) 0.64945(19) 0.10798(9) 0.0499(4) Uani d U 1 H H5 -0.0048 0.6035 0.0742 0.060 Uiso calc R 1 C C6 0.4484(2) 0.77564(18) 0.07639(9) 0.0491(4) Uani d U 1 H H6 0.4370 0.7946 0.1158 0.059 Uiso calc R 1 C C7 0.5282(2) 0.84974(19) 0.04511(10) 0.0550(5) Uani d U 1 H H7 0.5690 0.9180 0.0623 0.066 Uiso calc R 1 C C8 0.5467(2) 0.81977(19) -0.01361(10) 0.0547(5) Uani d U 1 H H8 0.6027 0.8674 -0.0360 0.066 Uiso calc R 1 C C9 0.4830(2) 0.72089(18) -0.03821(9) 0.0492(4) Uani d U 1 H H9 0.4952 0.7007 -0.0774 0.059 Uiso calc R 1 C C10 0.39819(19) 0.64920(16) -0.00389(7) 0.0387(4) Uani d U 1 C C11 0.1700(2) 0.34529(17) 0.09790(8) 0.0431(4) Uani d U 1 C C12 0.0872(2) 0.23300(17) 0.08679(8) 0.0437(4) Uani d U 1 C C13 0.1306(3) 0.13299(19) 0.11883(11) 0.0591(5) Uani d U 1 H H13 0.2121 0.1355 0.1474 0.071 Uiso calc R 1 C C14 0.0532(3) 0.0292(2) 0.10853(13) 0.0735(7) Uani d U 1 H H14 0.0844 -0.0382 0.1293 0.088 Uiso calc R 1 C C15 -0.0691(3) 0.0260(2) 0.06784(14) 0.0739(7) Uani d U 1 H H15 -0.1222 -0.0433 0.0618 0.089 Uiso calc R 1 C C16 -0.1141(3) 0.1243(2) 0.03587(13) 0.0716(7) Uani d U 1 H H16 -0.1973 0.1214 0.0082 0.086 Uiso calc R 1 C C17 -0.0355(2) 0.2279(2) 0.04486(11) 0.0568(5) Uani d U 1 H H17 -0.0651 0.2941 0.0227 0.068 Uiso calc R 1 C C18 0.5755(2) 0.53716(16) 0.19175(8) 0.0405(4) Uani d U 1 C C19 0.7157(2) 0.52812(18) 0.23220(9) 0.0455(4) Uani d U 1 C C20 0.7305(3) 0.5873(2) 0.28624(10) 0.0635(6) Uani d U 1 H H20 0.6531 0.6320 0.2977 0.076 Uiso calc R 1 C C21 0.8625(4) 0.5790(3) 0.32314(13) 0.0870(9) Uani d U 1 H H21 0.8738 0.6185 0.3595 0.104 Uiso calc R 1 C C22 0.9756(3) 0.5129(3) 0.30603(17) 0.0942(10) Uani d U 1 H H22 1.0636 0.5083 0.3309 0.113 Uiso calc R 1 C C23 0.9618(3) 0.4543(3) 0.25367(18) 0.0894(10) Uani d U 1 H H23 1.0398 0.4094 0.2428 0.107 Uiso calc R 1 C C24 0.8304(3) 0.4612(2) 0.21574(13) 0.0651(6) Uani d U 1 H H24 0.8205 0.4209 0.1796 0.078 Uiso calc R 1 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Cd1 0.04208(8) 0.04492(8) 0.03039(7) 0.00135(5) 0.00357(5) -0.00096(5) O1 0.0543(8) 0.0687(9) 0.0392(7) 0.0014(7) 0.0042(6) -0.0117(7) O2 0.0535(9) 0.0896(12) 0.0517(9) 0.0229(8) -0.0033(7) -0.0207(8) O3 0.0677(9) 0.0414(7) 0.0463(8) -0.0019(6) 0.0080(7) 0.0074(6) O4 0.0652(9) 0.0560(9) 0.0506(8) -0.0115(7) -0.0052(7) 0.0119(7) N1 0.0456(8) 0.0433(8) 0.0329(7) 0.0031(6) 0.0049(6) -0.0003(6) N2 0.0646(11) 0.0494(9) 0.0345(8) -0.0032(8) 0.0122(7) -0.0055(7) N3 0.0445(8) 0.0450(8) 0.0362(7) 0.0032(7) 0.0085(6) -0.0001(6) N4 0.0578(11) 0.0837(14) 0.0553(11) 0.0109(10) 0.0032(9) -0.0319(10) C1 0.0500(10) 0.0404(9) 0.0439(10) -0.0004(8) 0.0134(8) -0.0009(7) C2 0.0601(12) 0.0433(10) 0.0609(12) 0.0059(9) 0.0212(10) -0.0051(9) C3 0.0497(11) 0.0471(11) 0.0798(15) 0.0106(9) 0.0170(10) 0.0042(10) C4 0.0486(11) 0.0546(12) 0.0674(13) 0.0074(9) -0.0001(10) 0.0067(10) C5 0.0511(11) 0.0531(11) 0.0449(10) 0.0058(9) 0.0023(8) 0.0013(9) C6 0.0557(11) 0.0501(11) 0.0410(10) -0.0001(9) 0.0020(8) -0.0039(8) C7 0.0549(12) 0.0468(11) 0.0618(12) -0.0051(9) -0.0005(10) -0.0010(9) C8 0.0524(11) 0.0522(12) 0.0611(12) -0.0005(9) 0.0131(9) 0.0126(9) C9 0.0558(11) 0.0524(11) 0.0414(10) 0.0075(9) 0.0148(8) 0.0067(8) C10 0.0408(9) 0.0411(9) 0.0344(8) 0.0096(7) 0.0044(7) 0.0030(7) C11 0.0434(9) 0.0440(10) 0.0435(10) 0.0039(8) 0.0116(7) 0.0048(8) C12 0.0440(9) 0.0433(10) 0.0452(10) 0.0014(8) 0.0118(8) 0.0041(8) C13 0.0653(13) 0.0502(12) 0.0609(13) -0.0029(10) 0.0020(10) 0.0121(10) C14 0.0891(18) 0.0493(13) 0.0830(17) -0.0043(12) 0.0135(14) 0.0159(12) C15 0.0734(16) 0.0561(14) 0.0943(19) -0.0182(12) 0.0179(14) -0.0044(13) C16 0.0555(13) 0.0692(15) 0.0882(17) -0.0069(11) -0.0011(12) -0.0093(13) C17 0.0510(11) 0.0526(12) 0.0655(13) 0.0035(9) 0.0008(10) 0.0034(10) C18 0.0430(9) 0.0447(10) 0.0340(9) -0.0028(7) 0.0041(7) 0.0024(7) C19 0.0419(10) 0.0519(11) 0.0424(10) -0.0073(8) 0.0025(8) 0.0129(8) C20 0.0657(14) 0.0758(15) 0.0463(11) -0.0165(12) -0.0059(10) 0.0044(10) C21 0.089(2) 0.104(2) 0.0612(15) -0.0350(17) -0.0242(14) 0.0168(14) C22 0.0589(16) 0.119(2) 0.097(2) -0.0305(16) -0.0255(15) 0.0531(19) C23 0.0507(14) 0.105(2) 0.112(2) 0.0073(14) 0.0064(15) 0.0476(18) C24 0.0494(12) 0.0740(15) 0.0723(15) 0.0067(11) 0.0083(11) 0.0212(12) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cd Cd -0.8075 1.2024 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle N3 Cd1 N1 97.72(5) N3 Cd1 O2 98.17(5) N1 Cd1 O2 102.51(6) N3 Cd1 O4 103.77(6) N1 Cd1 O4 146.17(5) O2 Cd1 O4 99.96(6) N3 Cd1 O3 93.24(5) N1 Cd1 O3 98.06(5) O2 Cd1 O3 154.83(6) O4 Cd1 O3 55.36(5) N3 Cd1 O1 152.55(5) N1 Cd1 O1 87.47(5) O2 Cd1 O1 54.48(5) O4 Cd1 O1 85.33(6) O3 Cd1 O1 112.80(5) C18 O1 Cd1 90.02(12) C18 O2 Cd1 94.96(12) C11 O3 Cd1 90.18(12) C11 O4 Cd1 93.22(11) C10 N1 C6 118.16(17) C10 N1 Cd1 126.38(12) C6 N1 Cd1 113.92(12) C10 N2 H2A 120.0 C10 N2 H2B 120.0 H2A N2 H2B 120.0 C1 N3 C5 118.06(17) C1 N3 Cd1 127.30(13) C5 N3 Cd1 114.62(12) C1 N4 H4A 120.0 C1 N4 H4B 120.0 H4A N4 H4B 120.0 N4 C1 N3 118.39(17) N4 C1 C2 120.91(19) N3 C1 C2 120.69(19) C3 C2 C1 119.9(2) C3 C2 H2 120.0 C1 C2 H2 120.0 C2 C3 C4 119.7(2) C2 C3 H3 120.1 C4 C3 H3 120.1 C5 C4 C3 117.9(2) C5 C4 H4 121.1 C3 C4 H4 121.1 N3 C5 C4 123.7(2) N3 C5 H5 118.1 C4 C5 H5 118.1 N1 C6 C7 123.95(19) N1 C6 H6 118.0 C7 C6 H6 118.0 C6 C7 C8 117.7(2) C6 C7 H7 121.2 C8 C7 H7 121.2 C9 C8 C7 120.03(19) C9 C8 H8 120.0 C7 C8 H8 120.0 C8 C9 C10 119.57(18) C8 C9 H9 120.2 C10 C9 H9 120.2 N2 C10 N1 118.46(17) N2 C10 C9 120.98(17) N1 C10 C9 120.56(17) O3 C11 O4 121.14(18) O3 C11 C12 119.67(17) O4 C11 C12 119.19(17) C13 C12 C17 119.0(2) C13 C12 C11 120.52(18) C17 C12 C11 120.46(18) C14 C13 C12 120.3(2) C14 C13 H13 119.9 C12 C13 H13 119.9 C15 C14 C13 120.1(2) C15 C14 H14 120.0 C13 C14 H14 120.0 C14 C15 C16 120.5(2) C14 C15 H15 119.8 C16 C15 H15 119.8 C15 C16 C17 119.9(2) C15 C16 H16 120.0 C17 C16 H16 120.0 C16 C17 C12 120.2(2) C16 C17 H17 119.9 C12 C17 H17 119.9 O1 C18 O2 120.48(18) O1 C18 C19 120.08(18) O2 C18 C19 119.43(17) C24 C19 C20 120.0(2) C24 C19 C18 120.0(2) C20 C19 C18 120.0(2) C19 C20 C21 119.2(3) C19 C20 H20 120.4 C21 C20 H20 120.4 C22 C21 C20 120.0(3) C22 C21 H21 120.0 C20 C21 H21 120.0 C23 C22 C21 121.1(3) C23 C22 H22 119.4 C21 C22 H22 119.4 C22 C23 C24 120.0(3) C22 C23 H23 120.0 C24 C23 H23 120.0 C19 C24 C23 119.6(3) C19 C24 H24 120.2 C23 C24 H24 120.2 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag Cd1 N3 2.2857(15) y Cd1 N1 2.2945(15) y Cd1 O2 2.3206(15) y Cd1 O4 2.3251(15) y Cd1 O3 2.3936(15) y Cd1 O1 2.4287(15) y O1 C18 1.251(2) y O2 C18 1.255(2) y O3 C11 1.256(2) y O4 C11 1.261(2) y N1 C10 1.347(2) ? N1 C6 1.358(2) ? N2 C10 1.345(2) ? N2 H2A 0.8600 ? N2 H2B 0.8600 ? N3 C1 1.348(2) ? N3 C5 1.356(2) ? N4 C1 1.344(3) ? N4 H4A 0.8600 ? N4 H4B 0.8600 ? C1 C2 1.407(3) ? C2 C3 1.351(3) ? C2 H2 0.9300 ? C3 C4 1.398(3) ? C3 H3 0.9300 ? C4 C5 1.361(3) ? C4 H4 0.9300 ? C5 H5 0.9300 ? C6 C7 1.361(3) ? C6 H6 0.9300 ? C7 C8 1.393(3) ? C7 H7 0.9300 ? C8 C9 1.360(3) ? C8 H8 0.9300 ? C9 C10 1.412(3) ? C9 H9 0.9300 ? C11 C12 1.495(3) ? C12 C13 1.386(3) ? C12 C17 1.386(3) ? C13 C14 1.386(3) ? C13 H13 0.9300 ? C14 C15 1.367(4) ? C14 H14 0.9300 ? C15 C16 1.372(4) ? C15 H15 0.9300 ? C16 C17 1.387(3) ? C16 H16 0.9300 ? C17 H17 0.9300 ? C18 C19 1.492(3) ? C19 C24 1.378(3) ? C19 C20 1.386(3) ? C20 C21 1.392(4) ? C20 H20 0.9300 ? C21 C22 1.366(5) ? C21 H21 0.9300 ? C22 C23 1.350(5) ? C22 H22 0.9300 ? C23 C24 1.398(4) ? C23 H23 0.9300 ? C24 H24 0.9300 ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N2 H2A O3 . 0.86 2.15 2.999(2) 170 y N2 H2B O1 3_665 0.86 2.08 2.897(2) 157 y N4 H4A O2 . 0.86 2.03 2.880(3) 169 y N4 H4B O4 2_555 0.86 2.13 2.979(2) 168 y _cod_database_fobs_code 2216671 _journal_paper_doi 10.1107/S1600536807059181