#------------------------------------------------------------------------------ #$Date: 2009-11-23 07:50:56 +0200 (Mon, 23 Nov 2009) $ #$Revision: 903 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/2218165.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2218165 loop_ _publ_author_name 'Shabnam Habib, Rana' 'Jamshaid, Muhammad' 'Tahir, M. Nawaz' 'Khan, Tahir Javed' 'Khan, Islam Ullah' _publ_section_title ; (4R,5R,6S,7R,8S,9R,10S,13S)-7,8\b-Epoxymomilactone-A ; _journal_coeditor_code IM2057 _journal_issue 5 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o892 _journal_volume 64 _journal_year 2008 _chemical_formula_iupac 'C20 H26 O4' _chemical_formula_moiety 'C20 H26 O4' _chemical_formula_sum 'C20 H26 O4' _chemical_formula_weight 330.41 _chemical_name_systematic ; (4R,5R,6S,7R,8S,9R,10S,\ 13S)-7,8\b-Epoxymomilactone-A ; _space_group_IT_number 19 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'P 2ac 2ab' _symmetry_space_group_name_H-M 'P 21 21 21' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL97 _cell_angle_alpha 90.000 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 6.3996(7) _cell_length_b 13.1759(3) _cell_length_c 20.8540(10) _cell_measurement_reflns_used 1295 _cell_measurement_temperature 296(2) _cell_measurement_theta_max 28.63 _cell_measurement_theta_min 1.59 _cell_volume 1758.4(2) _computing_cell_refinement 'APEX2 (Bruker, 2007)' _computing_data_collection 'APEX2 (Bruker, 2007)' _computing_data_reduction 'SAINT (Bruker, 2007)' _computing_molecular_graphics 'ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2003)' _computing_publication_material ; WinGX (Farrugia, 1999) and PLATON (Spek, 2003) ; _computing_structure_refinement 'SHELXL97 (Sheldrick, 2008)' _computing_structure_solution 'SHELXS97 (Sheldrick, 2008)' _diffrn_ambient_temperature 296(2) _diffrn_detector_area_resol_mean 7.30 _diffrn_measured_fraction_theta_full 0.996 _diffrn_measured_fraction_theta_max 0.996 _diffrn_measurement_device_type 'Bruker Kappa APEX2 CCD' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0750 _diffrn_reflns_av_sigmaI/netI 0.0695 _diffrn_reflns_limit_h_max 8 _diffrn_reflns_limit_h_min -8 _diffrn_reflns_limit_k_max 14 _diffrn_reflns_limit_k_min -17 _diffrn_reflns_limit_l_max 28 _diffrn_reflns_limit_l_min -28 _diffrn_reflns_number 19288 _diffrn_reflns_theta_full 28.85 _diffrn_reflns_theta_max 28.85 _diffrn_reflns_theta_min 2.49 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.086 _exptl_absorpt_correction_T_max 0.990 _exptl_absorpt_correction_T_min 0.980 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Bruker, 2005)' _exptl_crystal_colour Colourless _exptl_crystal_density_diffrn 1.248 _exptl_crystal_density_method 'not measured' _exptl_crystal_description needle _exptl_crystal_F_000 712 _exptl_crystal_size_max 0.25 _exptl_crystal_size_mid 0.10 _exptl_crystal_size_min 0.09 _refine_diff_density_max 0.137 _refine_diff_density_min -0.175 _refine_ls_goodness_of_fit_ref 1.030 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 223 _refine_ls_number_reflns 2635 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.030 _refine_ls_R_factor_all 0.1418 _refine_ls_R_factor_gt 0.0496 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0443P)^2^+0.0772P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0923 _refine_ls_wR_factor_ref 0.1168 _reflns_number_gt 1202 _reflns_number_total 2635 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file im2057.cif _[local]_cod_data_source_block I loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' 'x+1/2, -y+1/2, -z' '-x, y+1/2, -z+1/2' loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy O O1 0.2901(4) 0.5384(2) 0.77739(11) 0.1276(11) Uani d . 1 O O2 0.6901(4) 0.54820(17) 0.70678(11) 0.0895(7) Uani d . 1 O O3 0.6511(3) 0.64702(13) 0.62196(9) 0.0641(5) Uani d . 1 O O4 0.4101(3) 0.82859(12) 0.50957(8) 0.0624(5) Uani d . 1 C C1 0.0673(4) 0.7697(2) 0.70647(13) 0.0687(8) Uani d . 1 H H1A -0.0511 0.7524 0.6796 0.082 Uiso calc R 1 H H1B 0.0347 0.8324 0.7288 0.082 Uiso calc R 1 C C2 0.1031(5) 0.6849(2) 0.75567(14) 0.0848(10) Uani d . 1 H H2A 0.1551 0.7159 0.7947 0.102 Uiso calc R 1 H H2B -0.0316 0.6551 0.7657 0.102 Uiso calc R 1 C C3 0.2466(5) 0.6019(3) 0.73828(15) 0.0739(9) Uani d . 1 C C4 0.3374(5) 0.5948(2) 0.67075(12) 0.0577(7) Uani d . 1 C C5 0.2923(4) 0.68587(18) 0.62796(11) 0.0499(7) Uani d . 1 H H5 0.1673 0.6716 0.6024 0.060 Uiso calc R 1 C C6 0.4805(4) 0.68849(19) 0.58381(11) 0.0553(7) Uani d . 1 H H6 0.4545 0.6434 0.5473 0.066 Uiso calc R 1 C C7 0.5436(4) 0.7907(2) 0.55901(11) 0.0535(7) Uani d . 1 H H7 0.6937 0.8028 0.5537 0.064 Uiso calc R 1 C C8 0.4140(4) 0.87944(18) 0.57182(11) 0.0462(6) Uani d . 1 C C9 0.2192(4) 0.86667(18) 0.61280(11) 0.0459(6) Uani d . 1 H H9 0.1100 0.8397 0.5846 0.055 Uiso calc R 1 C C10 0.2590(4) 0.78561(18) 0.66466(11) 0.0449(6) Uani d . 1 C C11 0.1424(5) 0.9704(2) 0.63641(13) 0.0654(8) Uani d . 1 H H11A 0.0037 0.9639 0.6547 0.078 Uiso calc R 1 H H11B 0.2354 0.9960 0.6694 0.078 Uiso calc R 1 C C12 0.1373(5) 1.0436(2) 0.57995(14) 0.0672(8) Uani d . 1 H H12A 0.0686 1.1058 0.5932 0.081 Uiso calc R 1 H H12B 0.0551 1.0139 0.5457 0.081 Uiso calc R 1 C C13 0.3552(5) 1.06931(19) 0.55425(14) 0.0631(8) Uani d . 1 C C14 0.5096(4) 0.98319(19) 0.57133(14) 0.0608(8) Uani d . 1 H H14A 0.6235 0.9839 0.5406 0.073 Uiso calc R 1 H H14B 0.5684 0.9968 0.6133 0.073 Uiso calc R 1 C C15 0.3421(6) 1.0775(3) 0.48310(17) 0.0956(12) Uani d . 1 H H15 0.3070 1.0178 0.4619 0.115 Uiso calc R 1 C C16 0.3716(10) 1.1536(5) 0.4474(3) 0.171(3) Uani d . 1 C C17 0.4321(6) 1.1672(2) 0.5862(2) 0.1304(16) Uani d . 1 H H17A 0.4403 1.1573 0.6317 0.196 Uiso calc R 1 H H17B 0.3363 1.2213 0.5770 0.196 Uiso calc R 1 H H17C 0.5679 1.1843 0.5699 0.196 Uiso calc R 1 C C18 0.5739(5) 0.5923(2) 0.67153(14) 0.0635(8) Uani d . 1 C C19 0.2609(7) 0.4944(2) 0.64183(16) 0.1028(13) Uani d . 1 H H19A 0.1109 0.4939 0.6409 0.154 Uiso calc R 1 H H19B 0.3099 0.4389 0.6675 0.154 Uiso calc R 1 H H19C 0.3139 0.4876 0.5990 0.154 Uiso calc R 1 C C20 0.4458(4) 0.81615(19) 0.70649(11) 0.0535(7) Uani d . 1 H H20A 0.5665 0.8259 0.6799 0.080 Uiso calc R 1 H H20B 0.4735 0.7635 0.7372 0.080 Uiso calc R 1 H H20C 0.4143 0.8782 0.7286 0.080 Uiso calc R 1 H H16A 0.378(5) 1.143(2) 0.4045(13) 0.080 Uiso d . 1 H H16B 0.397(5) 1.214(2) 0.4727(13) 0.080 Uiso d . 1 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.124(2) 0.153(2) 0.1054(19) 0.0407(19) 0.0296(18) 0.0790(18) O2 0.0755(17) 0.0982(17) 0.0950(15) 0.0171(13) -0.0114(13) 0.0445(13) O3 0.0669(13) 0.0666(12) 0.0588(11) 0.0172(10) 0.0070(11) 0.0134(10) O4 0.0828(15) 0.0634(12) 0.0409(10) 0.0064(10) -0.0036(9) 0.0013(9) C1 0.0527(19) 0.082(2) 0.0713(19) -0.0007(16) 0.0122(16) 0.0101(18) C2 0.072(2) 0.105(3) 0.078(2) -0.011(2) 0.0138(18) 0.028(2) C3 0.061(2) 0.084(2) 0.077(2) -0.0048(19) -0.0003(18) 0.0255(19) C4 0.063(2) 0.0541(17) 0.0558(18) -0.0116(16) -0.0113(16) 0.0105(14) C5 0.0542(18) 0.0468(16) 0.0487(14) -0.0096(13) -0.0153(13) 0.0047(13) C6 0.074(2) 0.0522(18) 0.0399(14) 0.0088(15) -0.0037(15) -0.0001(13) C7 0.0567(18) 0.0583(18) 0.0455(15) 0.0058(14) 0.0061(14) 0.0049(13) C8 0.0454(16) 0.0496(16) 0.0435(14) 0.0008(13) -0.0021(13) -0.0003(12) C9 0.0398(16) 0.0517(16) 0.0462(14) 0.0009(12) -0.0024(13) 0.0008(13) C10 0.0387(15) 0.0545(17) 0.0415(13) -0.0029(12) -0.0001(13) -0.0006(13) C11 0.064(2) 0.0643(18) 0.0679(19) 0.0148(17) 0.0105(16) -0.0003(16) C12 0.069(2) 0.0561(18) 0.076(2) 0.0125(16) 0.0017(18) 0.0033(15) C13 0.059(2) 0.0462(18) 0.084(2) -0.0008(15) -0.0015(17) 0.0065(16) C14 0.0503(18) 0.0530(18) 0.0792(19) -0.0029(14) -0.0015(17) 0.0058(15) C15 0.098(3) 0.087(3) 0.102(3) 0.030(2) 0.018(2) 0.046(2) C16 0.207(6) 0.156(5) 0.150(5) 0.099(5) 0.068(5) 0.061(4) C17 0.125(4) 0.053(2) 0.213(5) -0.012(2) -0.034(3) -0.014(3) C18 0.075(2) 0.0528(18) 0.0624(19) 0.0052(17) -0.0019(19) 0.0097(16) C19 0.132(3) 0.054(2) 0.123(3) -0.0241(19) -0.047(3) 0.0172(19) C20 0.0569(18) 0.0573(17) 0.0462(14) -0.0039(14) -0.0069(13) -0.0065(13) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance O1 C3 1.201(3) O2 C18 1.196(3) O3 C18 1.354(3) O3 C6 1.457(3) O4 C7 1.429(3) O4 C8 1.461(3) C1 C10 1.519(3) C1 C2 1.534(4) C1 H1A 0.9700 C1 H1B 0.9700 C2 C3 1.474(4) C2 H2A 0.9700 C2 H2B 0.9700 C3 C4 1.526(4) C4 C18 1.514(4) C4 C5 1.523(3) C4 C19 1.534(4) C5 C6 1.516(4) C5 C10 1.536(3) C5 H5 0.9800 C6 C7 1.499(3) C6 H6 0.9800 C7 C8 1.458(3) C7 H7 0.9800 C8 C14 1.498(3) C8 C9 1.521(3) C9 C11 1.533(3) C9 C10 1.541(3) C9 H9 0.9800 C10 C20 1.534(3) C11 C12 1.523(3) C11 H11A 0.9700 C11 H11B 0.9700 C12 C13 1.532(4) C12 H12A 0.9700 C12 H12B 0.9700 C13 C15 1.490(4) C13 C17 1.533(4) C13 C14 1.546(4) C14 H14A 0.9700 C14 H14B 0.9700 C15 C16 1.263(6) C15 H15 0.9300 C16 H16A 0.91(2) C16 H16B 0.97(2) C17 H17A 0.9600 C17 H17B 0.9600 C17 H17C 0.9600 C19 H19A 0.9600 C19 H19B 0.9600 C19 H19C 0.9600 C20 H20A 0.9600 C20 H20B 0.9600 C20 H20C 0.9600 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C18 O3 C6 110.1(2) C7 O4 C8 60.57(15) C10 C1 C2 111.3(2) C10 C1 H1A 109.4 C2 C1 H1A 109.4 C10 C1 H1B 109.4 C2 C1 H1B 109.4 H1A C1 H1B 108.0 C3 C2 C1 118.0(3) C3 C2 H2A 107.8 C1 C2 H2A 107.8 C3 C2 H2B 107.8 C1 C2 H2B 107.8 H2A C2 H2B 107.1 O1 C3 C2 119.6(3) O1 C3 C4 119.7(3) C2 C3 C4 120.6(3) C18 C4 C5 102.3(2) C18 C4 C3 111.8(2) C5 C4 C3 114.9(2) C18 C4 C19 107.7(3) C5 C4 C19 112.9(2) C3 C4 C19 107.1(3) C6 C5 C4 102.9(2) C6 C5 C10 113.2(2) C4 C5 C10 114.10(19) C6 C5 H5 108.8 C4 C5 H5 108.8 C10 C5 H5 108.8 O3 C6 C7 108.9(2) O3 C6 C5 104.77(18) C7 C6 C5 116.4(2) O3 C6 H6 108.9 C7 C6 H6 108.9 C5 C6 H6 108.9 O4 C7 C8 60.81(15) O4 C7 C6 113.7(2) C8 C7 C6 120.3(2) O4 C7 H7 116.7 C8 C7 H7 116.7 C6 C7 H7 116.7 C7 C8 O4 58.63(14) C7 C8 C14 119.9(2) O4 C8 C14 114.8(2) C7 C8 C9 118.7(2) O4 C8 C9 115.74(19) C14 C8 C9 116.1(2) C8 C9 C11 110.2(2) C8 C9 C10 109.59(19) C11 C9 C10 116.4(2) C8 C9 H9 106.7 C11 C9 H9 106.7 C10 C9 H9 106.7 C1 C10 C20 109.82(19) C1 C10 C5 106.3(2) C20 C10 C5 113.6(2) C1 C10 C9 111.4(2) C20 C10 C9 110.3(2) C5 C10 C9 105.44(18) C12 C11 C9 108.9(2) C12 C11 H11A 109.9 C9 C11 H11A 109.9 C12 C11 H11B 109.9 C9 C11 H11B 109.9 H11A C11 H11B 108.3 C11 C12 C13 113.0(2) C11 C12 H12A 109.0 C13 C12 H12A 109.0 C11 C12 H12B 109.0 C13 C12 H12B 109.0 H12A C12 H12B 107.8 C15 C13 C12 108.3(3) C15 C13 C17 112.9(3) C12 C13 C17 109.0(3) C15 C13 C14 108.6(2) C12 C13 C14 109.8(2) C17 C13 C14 108.2(3) C8 C14 C13 114.2(2) C8 C14 H14A 108.7 C13 C14 H14A 108.7 C8 C14 H14B 108.7 C13 C14 H14B 108.7 H14A C14 H14B 107.6 C16 C15 C13 129.5(5) C16 C15 H15 115.2 C13 C15 H15 115.2 C15 C16 H16A 118(2) C15 C16 H16B 111(2) H16A C16 H16B 131(3) C13 C17 H17A 109.5 C13 C17 H17B 109.5 H17A C17 H17B 109.5 C13 C17 H17C 109.5 H17A C17 H17C 109.5 H17B C17 H17C 109.5 O2 C18 O3 120.1(3) O2 C18 C4 129.7(3) O3 C18 C4 110.2(3) C4 C19 H19A 109.5 C4 C19 H19B 109.5 H19A C19 H19B 109.5 C4 C19 H19C 109.5 H19A C19 H19C 109.5 H19B C19 H19C 109.5 C10 C20 H20A 109.5 C10 C20 H20B 109.5 H20A C20 H20B 109.5 C10 C20 H20C 109.5 H20A C20 H20C 109.5 H20B C20 H20C 109.5 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C10 C1 C2 C3 -30.0(4) C1 C2 C3 O1 174.5(3) C1 C2 C3 C4 -6.6(4) O1 C3 C4 C18 -57.0(4) C2 C3 C4 C18 124.1(3) O1 C3 C4 C5 -173.1(3) C2 C3 C4 C5 8.0(4) O1 C3 C4 C19 60.7(4) C2 C3 C4 C19 -118.2(3) C18 C4 C5 C6 28.8(2) C3 C4 C5 C6 150.2(2) C19 C4 C5 C6 -86.7(3) C18 C4 C5 C10 -94.2(3) C3 C4 C5 C10 27.2(3) C19 C4 C5 C10 150.3(3) C18 O3 C6 C7 145.2(2) C18 O3 C6 C5 20.1(3) C4 C5 C6 O3 -30.2(2) C10 C5 C6 O3 93.4(2) C4 C5 C6 C7 -150.5(2) C10 C5 C6 C7 -26.9(3) C8 O4 C7 C6 112.7(2) O3 C6 C7 O4 166.57(18) C5 C6 C7 O4 -75.4(3) O3 C6 C7 C8 -124.6(2) C5 C6 C7 C8 -6.5(3) C6 C7 C8 O4 -101.9(3) O4 C7 C8 C14 -102.5(3) C6 C7 C8 C14 155.6(2) O4 C7 C8 C9 104.2(2) C6 C7 C8 C9 2.3(3) C7 O4 C8 C14 111.2(2) C7 O4 C8 C9 -109.3(2) C7 C8 C9 C11 163.7(2) O4 C8 C9 C11 -129.6(2) C14 C8 C9 C11 9.4(3) C7 C8 C9 C10 34.3(3) O4 C8 C9 C10 101.1(2) C14 C8 C9 C10 -119.9(2) C2 C1 C10 C20 -60.7(3) C2 C1 C10 C5 62.5(3) C2 C1 C10 C9 176.9(2) C6 C5 C10 C1 -179.6(2) C4 C5 C10 C1 -62.4(3) C6 C5 C10 C20 -58.8(3) C4 C5 C10 C20 58.5(3) C6 C5 C10 C9 62.1(3) C4 C5 C10 C9 179.3(2) C8 C9 C10 C1 -179.5(2) C11 C9 C10 C1 54.6(3) C8 C9 C10 C20 58.3(2) C11 C9 C10 C20 -67.5(3) C8 C9 C10 C5 -64.7(2) C11 C9 C10 C5 169.5(2) C8 C9 C11 C12 47.6(3) C10 C9 C11 C12 173.2(2) C9 C11 C12 C13 -67.5(3) C11 C12 C13 C15 142.6(3) C11 C12 C13 C17 -94.1(3) C11 C12 C13 C14 24.2(3) C7 C8 C14 C13 153.1(2) O4 C8 C14 C13 86.4(3) C9 C8 C14 C13 -52.9(3) C15 C13 C14 C8 -84.6(3) C12 C13 C14 C8 33.6(3) C17 C13 C14 C8 152.5(3) C12 C13 C15 C16 115.8(5) C17 C13 C15 C16 -5.0(6) C14 C13 C15 C16 -125.0(5) C6 O3 C18 O2 176.6(3) C6 O3 C18 C4 -1.0(3) C5 C4 C18 O2 164.5(3) C3 C4 C18 O2 41.0(4) C19 C4 C18 O2 -76.3(4) C5 C4 C18 O3 -18.1(3) C3 C4 C18 O3 -141.6(2) C19 C4 C18 O3 101.0(3) loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag C2 H2B O2 1_455 0.97 2.58 3.356(5) 137 yes C7 H7 O4 3_566 0.98 2.58 3.164(4) 118 yes C11 H11A O1 4_556 0.97 2.55 3.420(5) 149 yes C14 H14B O1 4_656 0.97 2.52 3.486(5) 178 yes