#------------------------------------------------------------------------------ #$Date: 2016-02-20 22:30:07 +0200 (Sat, 20 Feb 2016) $ #$Revision: 176789 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/22/33/2223369.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2223369 loop_ _publ_author_name 'Monroe, Thomas Blake' 'Moazami, Yasamin' 'Jones, Daniel S.' 'Ogle, Craig A.' _publ_section_title ; Methyl 5,6-dimethoxy-1H-indole-2-carboxylate ; _journal_coeditor_code FJ2241 _journal_issue 10 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o2353 _journal_paper_doi 10.1107/S1600536809034667 _journal_volume 65 _journal_year 2009 _chemical_formula_iupac 'C12 H13 N1 O4' _chemical_formula_moiety 'C12 H13 N1 O4' _chemical_formula_sum 'C12 H13 N O4' _chemical_formula_weight 235.23 _chemical_name_systematic ; Methyl 5,6-dimethoxy-1H-indole-2-carboxylate ; _space_group_IT_number 61 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall '-P 2ac 2ab' _symmetry_space_group_name_H-M 'P b c a' _audit_creation_method 'WinGX routine CIF_UPDATE' _cell_angle_alpha 90 _cell_angle_beta 90 _cell_angle_gamma 90 _cell_formula_units_Z 8 _cell_length_a 17.0768(19) _cell_length_b 7.7232(11) _cell_length_c 17.678(2) _cell_measurement_reflns_used 25 _cell_measurement_temperature 295(2) _cell_measurement_theta_max 43.03 _cell_measurement_theta_min 10.03 _cell_volume 2331.5(5) _computing_cell_refinement 'CAD-4 EXPRESS (Enraf--Nonius, 1994)' _computing_data_collection 'CAD-4 EXPRESS (Enraf--Nonius, 1994)' _computing_data_reduction 'XCAD4 (Harms & Wocadlo, 1995)' _computing_molecular_graphics ;ORTEP-3 for Windows (Farrugia, 1997) and Mercury (Macrae et al., 2006) ; _computing_publication_material 'WinGX (Farrugia, 1999)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 2008)' _computing_structure_solution 'SHELXS97 (Sheldrick, 2008)' _diffrn_ambient_temperature 295(2) _diffrn_measured_fraction_theta_full 1 _diffrn_measured_fraction_theta_max 1 _diffrn_measurement_device '\k-geometry diffractometer' _diffrn_measurement_device_type 'Enraf--Nonius CAD-4' _diffrn_measurement_method 'Non-profiled \w/2\q' _diffrn_radiation_type CuK\a _diffrn_radiation_wavelength 1.54184 _diffrn_reflns_av_R_equivalents 0.0302 _diffrn_reflns_limit_h_max 20 _diffrn_reflns_limit_h_min -20 _diffrn_reflns_limit_k_max 9 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 21 _diffrn_reflns_limit_l_min -21 _diffrn_reflns_number 9909 _diffrn_reflns_theta_full 67.41 _diffrn_reflns_theta_max 67.41 _diffrn_reflns_theta_min 5 _diffrn_standards_decay_% 1 _diffrn_standards_interval_count 171 _diffrn_standards_interval_time 57 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.85 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.34 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 992 _exptl_crystal_size_max 0.36 _exptl_crystal_size_mid 0.22 _exptl_crystal_size_min 0.21 _refine_diff_density_max 0.143 _refine_diff_density_min -0.117 _refine_ls_extinction_coef 0.0047(4) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method 'SHELXL97 (Sheldrick, 2008)' _refine_ls_goodness_of_fit_ref 1.019 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 162 _refine_ls_number_reflns 2098 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.019 _refine_ls_R_factor_gt 0.0345 _refine_ls_shift/su_max 0 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0613P)^2^+0.2248P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref 0.1015 _reflns_number_gt 1522 _reflns_number_total 2098 _reflns_threshold_expression I>2\s(I) _cod_data_source_file fj2241.cif _cod_data_source_block I _cod_database_code 2223369 _cod_database_fobs_code 2223369 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' 'x+1/2, -y+1/2, -z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, y, -z-1/2' '-x-1/2, y-1/2, z' 'x, -y-1/2, z-1/2' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group N N 0.05760(8) 0.76815(19) 0.51504(7) 0.0509(3) Uani d . 1 . . O O1 0.07015(8) 1.05091(17) 0.41553(7) 0.0727(4) Uani d . 1 . . O O2 0.17099(7) 0.92154(18) 0.35786(7) 0.0722(4) Uani d . 1 . . O O3 0.00702(6) 0.30330(14) 0.69682(6) 0.0564(3) Uani d . 1 . . O O4 0.12332(7) 0.14080(15) 0.64271(7) 0.0656(4) Uani d . 1 . . C C2 0.11320(9) 0.7786(2) 0.45863(8) 0.0516(4) Uani d . 1 . . C C3 0.15832(9) 0.6316(2) 0.46040(8) 0.0530(4) Uani d . 1 . . H H3 0.2001 0.6062 0.4285 0.064 Uiso calc R 1 . . C C4 0.15041(8) 0.3618(2) 0.54858(8) 0.0495(4) Uani d . 1 . . H H4 0.1918 0.2997 0.5277 0.059 Uiso calc R 1 . . C C5 0.10882(9) 0.2958(2) 0.60783(8) 0.0476(4) Uani d . 1 . . C C6 0.04402(8) 0.3882(2) 0.63953(8) 0.0453(4) Uani d . 1 . . C C7 0.02331(8) 0.5479(2) 0.61286(8) 0.0459(4) Uani d . 1 . . H H7 -0.018 0.6096 0.634 0.055 Uiso calc R 1 . . C C8 0.06679(8) 0.6150(2) 0.55251(8) 0.0448(4) Uani d . 1 . . C C9 0.12971(8) 0.5256(2) 0.51953(8) 0.0466(4) Uani d . 1 . . C C10 0.11447(10) 0.9300(2) 0.41017(9) 0.0556(4) Uani d . 1 . . C C11 0.17434(13) 1.0657(4) 0.30566(12) 0.0936(8) Uani d . 1 . . H H11A 0.1271 1.0693 0.2763 0.14 Uiso calc R 1 . . H H11B 0.2184 1.0517 0.2725 0.14 Uiso calc R 1 . . H H11C 0.1797 1.1718 0.3335 0.14 Uiso calc R 1 . . C C12 0.18869(10) 0.0457(2) 0.61719(11) 0.0661(5) Uani d . 1 . . H H12A 0.1826 0.0201 0.5644 0.099 Uiso calc R 1 . . H H12B 0.1925 -0.0604 0.6452 0.099 Uiso calc R 1 . . H H12C 0.2354 0.1128 0.6246 0.099 Uiso calc R 1 . . C C13 -0.05334(10) 0.3942(2) 0.73565(10) 0.0622(5) Uani d . 1 . . H H13A -0.0324 0.4989 0.7568 0.093 Uiso calc R 1 . . H H13B -0.0737 0.3228 0.7755 0.093 Uiso calc R 1 . . H H13C -0.0946 0.4221 0.7009 0.093 Uiso calc R 1 . . H H1 0.0202(10) 0.852(2) 0.5251(10) 0.064(5) Uiso d . 1 . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 N 0.0517(7) 0.0518(8) 0.0492(7) -0.0002(6) 0.0024(6) 0.0013(6) O1 0.0850(9) 0.0656(9) 0.0676(8) 0.0067(7) 0.0120(7) 0.0111(6) O2 0.0623(7) 0.0919(10) 0.0624(7) 0.0005(7) 0.0096(6) 0.0236(7) O3 0.0601(6) 0.0515(7) 0.0576(6) 0.0056(5) 0.0185(5) 0.0030(5) O4 0.0607(7) 0.0554(7) 0.0806(8) 0.0140(6) 0.0226(6) 0.0125(6) C2 0.0472(8) 0.0623(10) 0.0454(8) -0.0074(8) -0.0004(7) 0.0008(7) C3 0.0422(8) 0.0693(11) 0.0475(8) -0.0042(8) 0.0021(6) 0.0007(8) C4 0.0390(7) 0.0577(10) 0.0517(8) 0.0014(7) 0.0033(6) -0.0050(8) C5 0.0442(8) 0.0465(9) 0.0520(8) 0.0006(6) 0.0013(6) -0.0026(7) C6 0.0437(7) 0.0482(9) 0.0438(7) -0.0035(7) 0.0026(6) -0.0036(7) C7 0.0435(8) 0.0486(9) 0.0457(8) 0.0003(7) 0.0029(6) -0.0069(7) C8 0.0431(7) 0.0474(8) 0.0438(7) -0.0037(6) -0.0037(6) -0.0030(7) C9 0.0375(7) 0.0583(10) 0.0441(7) -0.0041(7) -0.0016(6) -0.0028(7) C10 0.0522(9) 0.0675(11) 0.0470(8) -0.0070(9) -0.0033(7) 0.0026(8) C11 0.0829(14) 0.124(2) 0.0739(12) -0.0071(13) 0.0069(11) 0.0451(13) C12 0.0582(10) 0.0595(11) 0.0806(12) 0.0141(9) 0.0098(9) 0.0036(9) C13 0.0647(10) 0.0622(10) 0.0598(10) 0.0076(9) 0.0219(8) 0.0008(9) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0181 0.0091 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0 0 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0311 0.018 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0492 0.0322 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _diffrn_standard_refln_index_h _diffrn_standard_refln_index_k _diffrn_standard_refln_index_l 0 0 4 0 -2 1 0 2 1 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag C8 N C2 . . 108.82(14) ? C8 N H1 . . 126.2(11) ? C2 N H1 . . 125.0(11) ? C10 O2 C11 . . 115.57(16) ? C6 O3 C13 . . 117.19(12) ? C5 O4 C12 . . 117.03(13) ? C3 C2 N . . 108.74(14) ? C3 C2 C10 . . 132.24(14) ? N C2 C10 . . 119.01(15) ? C2 C3 C9 . . 107.56(14) ? C2 C3 H3 . . 126.2 ? C9 C3 H3 . . 126.2 ? C5 C4 C9 . . 118.94(14) ? C5 C4 H4 . . 120.5 ? C9 C4 H4 . . 120.5 ? C4 C5 O4 . . 125.31(14) ? C4 C5 C6 . . 121.15(15) ? O4 C5 C6 . . 113.54(13) ? O3 C6 C7 . . 124.82(13) ? O3 C6 C5 . . 114.20(13) ? C7 C6 C5 . . 120.98(14) ? C6 C7 C8 . . 117.36(13) ? C6 C7 H7 . . 121.3 ? C8 C7 H7 . . 121.3 ? N C8 C7 . . 129.03(14) ? N C8 C9 . . 108.22(13) ? C7 C8 C9 . . 122.74(14) ? C8 C9 C4 . . 118.80(14) ? C8 C9 C3 . . 106.66(14) ? C4 C9 C3 . . 134.55(14) ? O1 C10 O2 . . 123.01(16) ? O1 C10 C2 . . 124.67(15) ? O2 C10 C2 . . 112.32(16) ? O2 C11 H11A . . 109.5 ? O2 C11 H11B . . 109.5 ? H11A C11 H11B . . 109.5 ? O2 C11 H11C . . 109.5 ? H11A C11 H11C . . 109.5 ? H11B C11 H11C . . 109.5 ? O4 C12 H12A . . 109.5 ? O4 C12 H12B . . 109.5 ? H12A C12 H12B . . 109.5 ? O4 C12 H12C . . 109.5 ? H12A C12 H12C . . 109.5 ? H12B C12 H12C . . 109.5 ? O3 C13 H13A . . 109.5 ? O3 C13 H13B . . 109.5 ? H13A C13 H13B . . 109.5 ? O3 C13 H13C . . 109.5 ? H13A C13 H13C . . 109.5 ? H13B C13 H13C . . 109.5 ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag N C8 . 1.365(2) ? N C2 . 1.3792(19) ? N H1 . 0.926(19) ? O1 C10 . 1.206(2) ? O2 C10 . 1.338(2) ? O2 C11 . 1.447(2) ? O3 C6 . 1.3619(18) ? O3 C13 . 1.4235(19) ? O4 C5 . 1.3695(19) ? O4 C12 . 1.410(2) ? C2 C3 . 1.373(2) ? C2 C10 . 1.449(2) ? C3 C9 . 1.415(2) ? C3 H3 . 0.93 ? C4 C5 . 1.364(2) ? C4 C9 . 1.410(2) ? C4 H4 . 0.93 ? C5 C6 . 1.431(2) ? C6 C7 . 1.367(2) ? C7 C8 . 1.399(2) ? C7 H7 . 0.93 ? C8 C9 . 1.404(2) ? C11 H11A . 0.96 ? C11 H11B . 0.96 ? C11 H11C . 0.96 ? C12 H12A . 0.96 ? C12 H12B . 0.96 ? C12 H12C . 0.96 ? C13 H13A . 0.96 ? C13 H13B . 0.96 ? C13 H13C . 0.96 ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA N H1 O1 5_576 0.926(19) 2.011(19) 2.867(2) 152.9(16)