#------------------------------------------------------------------------------ #$Date: 2011-09-10 06:16:28 +0300 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: file:///home/coder/svn-repositories/cod/cif/2/2223369.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2223369 loop_ _publ_author_name 'Monroe, Thomas Blake' 'Moazami, Yasamin' 'Jones, Daniel S.' 'Ogle, Craig A.' _publ_section_title ; Methyl 5,6-dimethoxy-1H-indole-2-carboxylate ; _journal_coeditor_code FJ2241 _journal_issue 10 _journal_name_full 'Acta Crystallographica Section E' _journal_page_first o2353 _journal_volume 65 _journal_year 2009 _chemical_formula_iupac 'C12 H13 N1 O4' _chemical_formula_moiety 'C12 H13 N1 O4' _chemical_formula_sum 'C12 H13 N O4' _chemical_formula_weight 235.23 _chemical_name_systematic ; Methyl 5,6-dimethoxy-1H-indole-2-carboxylate ; _space_group_IT_number 61 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall '-P 2ac 2ab' _symmetry_space_group_name_H-M 'P b c a' _audit_creation_method 'WinGX routine CIF_UPDATE' _cell_angle_alpha 90 _cell_angle_beta 90 _cell_angle_gamma 90 _cell_formula_units_Z 8 _cell_length_a 17.0768(19) _cell_length_b 7.7232(11) _cell_length_c 17.678(2) _cell_measurement_reflns_used 25 _cell_measurement_temperature 295(2) _cell_measurement_theta_max 43.03 _cell_measurement_theta_min 10.03 _cell_volume 2331.5(5) _computing_cell_refinement 'CAD-4 EXPRESS (Enraf--Nonius, 1994)' _computing_data_collection 'CAD-4 EXPRESS (Enraf--Nonius, 1994)' _computing_data_reduction 'XCAD4 (Harms & Wocadlo, 1995)' _computing_molecular_graphics ;ORTEP-3 for Windows (Farrugia, 1997) and Mercury (Macrae et al., 2006) ; _computing_publication_material 'WinGX (Farrugia, 1999)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 2008)' _computing_structure_solution 'SHELXS97 (Sheldrick, 2008)' _diffrn_ambient_temperature 295(2) _diffrn_measured_fraction_theta_full 1 _diffrn_measured_fraction_theta_max 1 _diffrn_measurement_device '\k-geometry diffractometer' _diffrn_measurement_device_type 'Enraf--Nonius CAD-4' _diffrn_measurement_method 'Non-profiled \w/2\q' _diffrn_radiation_type CuK\a _diffrn_radiation_wavelength 1.54184 _diffrn_reflns_av_R_equivalents 0.0302 _diffrn_reflns_limit_h_max 20 _diffrn_reflns_limit_h_min -20 _diffrn_reflns_limit_k_max 9 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 21 _diffrn_reflns_limit_l_min -21 _diffrn_reflns_number 9909 _diffrn_reflns_theta_full 67.41 _diffrn_reflns_theta_max 67.41 _diffrn_reflns_theta_min 5 _diffrn_standards_decay_% 1 _diffrn_standards_interval_count 171 _diffrn_standards_interval_time 57 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.85 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.34 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 992 _exptl_crystal_size_max 0.36 _exptl_crystal_size_mid 0.22 _exptl_crystal_size_min 0.21 _refine_diff_density_max 0.143 _refine_diff_density_min -0.117 _refine_ls_extinction_coef 0.0047(4) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method 'SHELXL97 (Sheldrick, 2008)' _refine_ls_goodness_of_fit_ref 1.019 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 162 _refine_ls_number_reflns 2098 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.019 _refine_ls_R_factor_gt 0.0345 _refine_ls_shift/su_max 0 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0613P)^2^+0.2248P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref 0.1015 _reflns_number_gt 1522 _reflns_number_total 2098 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file fj2241.cif _[local]_cod_data_source_block I _cod_database_code 2223369 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' 'x+1/2, -y+1/2, -z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, y, -z-1/2' '-x-1/2, y-1/2, z' 'x, -y-1/2, z-1/2' loop_ _atom_site_type_symbol _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy N N 0.05760(8) 0.76815(19) 0.51504(7) 0.0509(3) Uani d . 1 O O1 0.07015(8) 1.05091(17) 0.41553(7) 0.0727(4) Uani d . 1 O O2 0.17099(7) 0.92154(18) 0.35786(7) 0.0722(4) Uani d . 1 O O3 0.00702(6) 0.30330(14) 0.69682(6) 0.0564(3) Uani d . 1 O O4 0.12332(7) 0.14080(15) 0.64271(7) 0.0656(4) Uani d . 1 C C2 0.11320(9) 0.7786(2) 0.45863(8) 0.0516(4) Uani d . 1 C C3 0.15832(9) 0.6316(2) 0.46040(8) 0.0530(4) Uani d . 1 H H3 0.2001 0.6062 0.4285 0.064 Uiso calc R 1 C C4 0.15041(8) 0.3618(2) 0.54858(8) 0.0495(4) Uani d . 1 H H4 0.1918 0.2997 0.5277 0.059 Uiso calc R 1 C C5 0.10882(9) 0.2958(2) 0.60783(8) 0.0476(4) Uani d . 1 C C6 0.04402(8) 0.3882(2) 0.63953(8) 0.0453(4) Uani d . 1 C C7 0.02331(8) 0.5479(2) 0.61286(8) 0.0459(4) Uani d . 1 H H7 -0.018 0.6096 0.634 0.055 Uiso calc R 1 C C8 0.06679(8) 0.6150(2) 0.55251(8) 0.0448(4) Uani d . 1 C C9 0.12971(8) 0.5256(2) 0.51953(8) 0.0466(4) Uani d . 1 C C10 0.11447(10) 0.9300(2) 0.41017(9) 0.0556(4) Uani d . 1 C C11 0.17434(13) 1.0657(4) 0.30566(12) 0.0936(8) Uani d . 1 H H11A 0.1271 1.0693 0.2763 0.14 Uiso calc R 1 H H11B 0.2184 1.0517 0.2725 0.14 Uiso calc R 1 H H11C 0.1797 1.1718 0.3335 0.14 Uiso calc R 1 C C12 0.18869(10) 0.0457(2) 0.61719(11) 0.0661(5) Uani d . 1 H H12A 0.1826 0.0201 0.5644 0.099 Uiso calc R 1 H H12B 0.1925 -0.0604 0.6452 0.099 Uiso calc R 1 H H12C 0.2354 0.1128 0.6246 0.099 Uiso calc R 1 C C13 -0.05334(10) 0.3942(2) 0.73565(10) 0.0622(5) Uani d . 1 H H13A -0.0324 0.4989 0.7568 0.093 Uiso calc R 1 H H13B -0.0737 0.3228 0.7755 0.093 Uiso calc R 1 H H13C -0.0946 0.4221 0.7009 0.093 Uiso calc R 1 H H1 0.0202(10) 0.852(2) 0.5251(10) 0.064(5) Uiso d . 1 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 N 0.0517(7) 0.0518(8) 0.0492(7) -0.0002(6) 0.0024(6) 0.0013(6) O1 0.0850(9) 0.0656(9) 0.0676(8) 0.0067(7) 0.0120(7) 0.0111(6) O2 0.0623(7) 0.0919(10) 0.0624(7) 0.0005(7) 0.0096(6) 0.0236(7) O3 0.0601(6) 0.0515(7) 0.0576(6) 0.0056(5) 0.0185(5) 0.0030(5) O4 0.0607(7) 0.0554(7) 0.0806(8) 0.0140(6) 0.0226(6) 0.0125(6) C2 0.0472(8) 0.0623(10) 0.0454(8) -0.0074(8) -0.0004(7) 0.0008(7) C3 0.0422(8) 0.0693(11) 0.0475(8) -0.0042(8) 0.0021(6) 0.0007(8) C4 0.0390(7) 0.0577(10) 0.0517(8) 0.0014(7) 0.0033(6) -0.0050(8) C5 0.0442(8) 0.0465(9) 0.0520(8) 0.0006(6) 0.0013(6) -0.0026(7) C6 0.0437(7) 0.0482(9) 0.0438(7) -0.0035(7) 0.0026(6) -0.0036(7) C7 0.0435(8) 0.0486(9) 0.0457(8) 0.0003(7) 0.0029(6) -0.0069(7) C8 0.0431(7) 0.0474(8) 0.0438(7) -0.0037(6) -0.0037(6) -0.0030(7) C9 0.0375(7) 0.0583(10) 0.0441(7) -0.0041(7) -0.0016(6) -0.0028(7) C10 0.0522(9) 0.0675(11) 0.0470(8) -0.0070(9) -0.0033(7) 0.0026(8) C11 0.0829(14) 0.124(2) 0.0739(12) -0.0071(13) 0.0069(11) 0.0451(13) C12 0.0582(10) 0.0595(11) 0.0806(12) 0.0141(9) 0.0098(9) 0.0036(9) C13 0.0647(10) 0.0622(10) 0.0598(10) 0.0076(9) 0.0219(8) 0.0008(9) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0181 0.0091 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0 0 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0311 0.018 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0492 0.0322 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _diffrn_standard_refln_index_h _diffrn_standard_refln_index_k _diffrn_standard_refln_index_l 0 0 4 0 -2 1 0 2 1 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C8 N C2 108.82(14) C8 N H1 126.2(11) C2 N H1 125.0(11) C10 O2 C11 115.57(16) C6 O3 C13 117.19(12) C5 O4 C12 117.03(13) C3 C2 N 108.74(14) C3 C2 C10 132.24(14) N C2 C10 119.01(15) C2 C3 C9 107.56(14) C2 C3 H3 126.2 C9 C3 H3 126.2 C5 C4 C9 118.94(14) C5 C4 H4 120.5 C9 C4 H4 120.5 C4 C5 O4 125.31(14) C4 C5 C6 121.15(15) O4 C5 C6 113.54(13) O3 C6 C7 124.82(13) O3 C6 C5 114.20(13) C7 C6 C5 120.98(14) C6 C7 C8 117.36(13) C6 C7 H7 121.3 C8 C7 H7 121.3 N C8 C7 129.03(14) N C8 C9 108.22(13) C7 C8 C9 122.74(14) C8 C9 C4 118.80(14) C8 C9 C3 106.66(14) C4 C9 C3 134.55(14) O1 C10 O2 123.01(16) O1 C10 C2 124.67(15) O2 C10 C2 112.32(16) O2 C11 H11A 109.5 O2 C11 H11B 109.5 H11A C11 H11B 109.5 O2 C11 H11C 109.5 H11A C11 H11C 109.5 H11B C11 H11C 109.5 O4 C12 H12A 109.5 O4 C12 H12B 109.5 H12A C12 H12B 109.5 O4 C12 H12C 109.5 H12A C12 H12C 109.5 H12B C12 H12C 109.5 O3 C13 H13A 109.5 O3 C13 H13B 109.5 H13A C13 H13B 109.5 O3 C13 H13C 109.5 H13A C13 H13C 109.5 H13B C13 H13C 109.5 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance N C8 1.365(2) N C2 1.3792(19) N H1 0.926(19) O1 C10 1.206(2) O2 C10 1.338(2) O2 C11 1.447(2) O3 C6 1.3619(18) O3 C13 1.4235(19) O4 C5 1.3695(19) O4 C12 1.410(2) C2 C3 1.373(2) C2 C10 1.449(2) C3 C9 1.415(2) C3 H3 0.93 C4 C5 1.364(2) C4 C9 1.410(2) C4 H4 0.93 C5 C6 1.431(2) C6 C7 1.367(2) C7 C8 1.399(2) C7 H7 0.93 C8 C9 1.404(2) C11 H11A 0.96 C11 H11B 0.96 C11 H11C 0.96 C12 H12A 0.96 C12 H12B 0.96 C12 H12C 0.96 C13 H13A 0.96 C13 H13B 0.96 C13 H13C 0.96 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA N H1 O1 5_576 0.926(19) 2.011(19) 2.867(2) 152.9(16)