#------------------------------------------------------------------------------ #$Date: 2019-11-11 20:34:14 +0200 (Mon, 11 Nov 2019) $ #$Revision: 227283 $ #$URL: file:///home/coder/svn-repositories/cod/cif/4/03/58/4035872.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_4035872 loop_ _publ_author_name 'Lv, Xiaokang' 'Li, Tingting' 'Wu, Qinghua' 'Yu, Changjiang' 'Jiao, Lijuan' 'Hao, Erhong' _publ_section_title ; Polybrominated BOPHY Dyes: Synthesis, Reactivity, and Properties. ; _journal_issue 3 _journal_name_full 'The Journal of organic chemistry' _journal_page_first 1134 _journal_page_last 1145 _journal_paper_doi 10.1021/acs.joc.7b02415 _journal_volume 83 _journal_year 2018 _chemical_formula_moiety '2(C10 H12 B Br2.5 F2 N4)' _chemical_formula_sum 'C20 H24 B2 Br5 F4 N8' _chemical_formula_weight 873.63 _space_group_crystal_system triclinic _space_group_IT_number 2 _space_group_name_Hall '-P 1' _space_group_name_H-M_alt 'P -1' _symmetry_Int_Tables_number 2 _audit_creation_date 2017-07-18 _audit_creation_method ; Olex2 1.2-beta (compiled 2016.11.30 svn.r3356 for OlexSys, GUI svn.r5269) ; _cell_angle_alpha 79.967(9) _cell_angle_beta 85.892(9) _cell_angle_gamma 85.819(10) _cell_formula_units_Z 1 _cell_length_a 6.275(5) _cell_length_b 10.748(8) _cell_length_c 11.424(9) _cell_measurement_reflns_used 3113 _cell_measurement_temperature 293.15 _cell_measurement_theta_max 26.874 _cell_measurement_theta_min 2.413 _cell_volume 755.3(10) _computing_cell_refinement 'SAINT v8.34A (Bruker, 2013)' _computing_data_reduction 'SAINT v8.34A (Bruker, 2013)' _computing_molecular_graphics 'Olex2 (Dolomanov et al., 2009)' _computing_publication_material 'Olex2 (Dolomanov et al., 2009)' _computing_structure_refinement 'olex2.refine (Bourhis et al., 2015)' _diffrn_ambient_temperature 293.15 _diffrn_detector 'CCD area detector' _diffrn_detector_area_resol_mean 5.6 _diffrn_detector_type 'Bruker SMART CCD 6000 area detector' _diffrn_measured_fraction_theta_full 0.9843 _diffrn_measured_fraction_theta_max 0.9843 _diffrn_measurement_device 'three-circle diffractometer' _diffrn_measurement_device_type 'Bruker APEX-II CCD' _diffrn_measurement_method '\w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_probe x-ray _diffrn_radiation_type 'Mo K\a' _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0311 _diffrn_reflns_av_unetI/netI 0.0398 _diffrn_reflns_limit_h_max 8 _diffrn_reflns_limit_h_min -8 _diffrn_reflns_limit_k_max 13 _diffrn_reflns_limit_k_min -13 _diffrn_reflns_limit_l_max 14 _diffrn_reflns_limit_l_min -14 _diffrn_reflns_number 8912 _diffrn_reflns_theta_full 27.4047 _diffrn_reflns_theta_max 27.40 _diffrn_reflns_theta_min 1.81 _diffrn_source 'sealed X-ray tube' _diffrn_source_target Mo _exptl_absorpt_coefficient_mu 6.701 _exptl_absorpt_correction_T_max 0.7456 _exptl_absorpt_correction_T_min 0.5484 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details ; SADABS-2014/5 (Bruker,2014/5) was used for absorption correction. wR2(int) was 0.1066 before and 0.0398 after correction. The Ratio of minimum to maximum transmission is 0.7355. The \l/2 correction factor is 0.00150. ; _exptl_crystal_colour 'metallic light colourless' _exptl_crystal_colour_lustre metallic _exptl_crystal_colour_modifier light _exptl_crystal_colour_primary colourless _exptl_crystal_density_diffrn 1.9205 _exptl_crystal_description cube _exptl_crystal_F_000 419.8772 _exptl_crystal_size_max 0.23 _exptl_crystal_size_mid 0.22 _exptl_crystal_size_min 0.21 _refine_diff_density_max 1.3456 _refine_diff_density_min -1.1694 _refine_diff_density_rms 0.1480 _refine_ls_d_res_high 0.7721 _refine_ls_d_res_low 11.2290 _refine_ls_goodness_of_fit_ref 1.0194 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_constraints 19 _refine_ls_number_parameters 181 _refine_ls_number_reflns 3387 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.0194 _refine_ls_R_factor_all 0.0757 _refine_ls_R_factor_gt 0.0454 _refine_ls_shift/su_max 0.0000 _refine_ls_shift/su_mean 0.0000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w=1/[\s^2^(Fo^2^)+(0.0434P)^2^+1.4390P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1001 _refine_ls_wR_factor_ref 0.1138 _reflns_Friedel_coverage 0.0 _reflns_limit_h_max 8 _reflns_limit_h_min -8 _reflns_limit_k_max 13 _reflns_limit_k_min -13 _reflns_limit_l_max 14 _reflns_limit_l_min 0 _reflns_number_gt 2306 _reflns_number_total 3387 _reflns_threshold_expression I>=2u(I) _cod_data_source_file jo7b02415_si_002.cif _cod_data_source_block 11 _cod_database_code 4035872 _olex2_refinement_description ; 1. Fixed Uiso At 1.2 times of: All C(H) groups, All C(H,H) groups, All N(H) groups At 1.5 times of: All C(H,H,H) groups 2. Others Fixed Sof: Br1(0.5) 3.a Secondary CH2 refined with riding coordinates: C7(H7a,H7b), C8(H8a,H8b), C9(H9a,H9b) 3.b Aromatic/amide H refined with riding coordinates: N1(H1), C5(H5), C11(H11) 3.c Idealised Me refined as rotating group: C10(H10a,H10b,H10c) ; _olex2_submission_special_instructions 'No special instructions were received' loop_ _space_group_symop_id _space_group_symop_operation_xyz 1 x,y,z 2 -x,-y,-z loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_refinement_flags_posn Br0a Br -0.36313(9) -0.36857(6) 0.03382(5) 0.0686(2) Uani 1.000000 . Br2 Br 0.10964(9) -0.23587(6) -0.12121(4) 0.05858(19) Uani 1.000000 . Br1 Br -0.3842(2) -0.27191(14) 0.31136(11) 0.0747(4) Uani 0.500000 . F1 F 0.0988(5) -0.1976(3) 0.4081(2) 0.0624(8) Uani 1.000000 . F2 F -0.1359(4) -0.0313(3) 0.3628(3) 0.0621(8) Uani 1.000000 . N1 N 0.4413(6) 0.1282(4) 0.3141(3) 0.0485(10) Uani 1.000000 . H1 H 0.5083(6) 0.1295(4) 0.2456(3) 0.0582(12) Uiso 1.000000 R N2 N 0.2192(6) -0.0185(3) 0.2707(3) 0.0379(8) Uani 1.000000 . N3 N -0.0323(5) -0.1594(3) 0.2112(3) 0.0341(8) Uani 1.000000 . N4 N 0.3380(6) -0.0088(4) 0.1615(3) 0.0432(9) Uani 1.000000 . C1 C -0.1948(7) -0.2330(4) 0.2011(4) 0.0384(10) Uani 1.000000 . C2 C -0.1762(7) -0.2699(4) 0.0913(4) 0.0397(10) Uani 1.000000 . C3 C 0.0058(7) -0.2178(4) 0.0319(4) 0.0359(10) Uani 1.000000 . C4 C 0.0930(7) -0.1490(4) 0.1061(4) 0.0359(9) Uani 1.000000 . C5 C 0.2719(7) -0.0732(4) 0.0880(4) 0.0421(11) Uani 1.000000 . H5 H 0.3496(7) -0.0696(4) 0.0151(4) 0.0506(13) Uiso 1.000000 R C7 C 0.5118(9) 0.2097(5) 0.3922(5) 0.0561(14) Uani 1.000000 . H7a H 0.4472(9) 0.1850(5) 0.4718(5) 0.0673(16) Uiso 1.000000 R H7b H 0.6659(9) 0.1975(5) 0.3965(5) 0.0673(16) Uiso 1.000000 R C8 C 0.4531(9) 0.3471(6) 0.3494(5) 0.0653(15) Uani 1.000000 . H8a H 0.5152(9) 0.3979(6) 0.3990(5) 0.0784(18) Uiso 1.000000 R H8b H 0.5117(9) 0.3712(6) 0.2684(5) 0.0784(18) Uiso 1.000000 R C9 C 0.2109(11) 0.3735(7) 0.3535(7) 0.086(2) Uani 1.000000 . H9a H 0.1509(11) 0.3232(7) 0.3027(7) 0.104(2) Uiso 1.000000 R H9b H 0.1536(11) 0.3459(7) 0.4343(7) 0.104(2) Uiso 1.000000 R C10 C 0.1419(16) 0.5038(8) 0.3169(11) 0.146(4) Uani 1.000000 . H10a H 0.173(12) 0.5519(16) 0.376(4) 0.219(6) Uiso 1.000000 GR H10b H 0.216(10) 0.536(2) 0.242(4) 0.219(6) Uiso 1.000000 GR H10c H -0.010(3) 0.5106(12) 0.307(8) 0.219(6) Uiso 1.000000 GR C11 C 0.2853(7) 0.0545(4) 0.3413(4) 0.0399(10) Uani 1.000000 . H11 H 0.2142(7) 0.0525(4) 0.4158(4) 0.0479(12) Uiso 1.000000 R B1 B 0.0318(8) -0.1048(5) 0.3185(5) 0.0410(12) Uani 1.000000 . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Br0a 0.0642(4) 0.0867(5) 0.0660(4) -0.0350(3) -0.0035(3) -0.0317(3) Br2 0.0575(3) 0.0861(4) 0.0381(3) -0.0153(3) 0.0040(2) -0.0253(3) Br1 0.0685(7) 0.0960(10) 0.0635(7) -0.0312(7) 0.0142(6) -0.0210(7) F1 0.080(2) 0.0666(19) 0.0401(15) -0.0277(16) -0.0152(14) 0.0063(14) F2 0.0489(16) 0.079(2) 0.0670(19) -0.0144(15) 0.0201(14) -0.0405(16) N1 0.050(2) 0.058(3) 0.043(2) -0.017(2) 0.0038(18) -0.0214(19) N2 0.0381(19) 0.043(2) 0.0347(19) -0.0063(16) 0.0023(15) -0.0134(16) N3 0.0326(18) 0.041(2) 0.0301(18) -0.0075(15) 0.0023(14) -0.0096(15) N4 0.044(2) 0.052(2) 0.036(2) -0.0150(18) 0.0109(16) -0.0137(18) C1 0.038(2) 0.041(3) 0.037(2) -0.0069(19) -0.0008(18) -0.0071(19) C2 0.038(2) 0.042(3) 0.042(2) -0.010(2) -0.0064(19) -0.011(2) C3 0.035(2) 0.044(3) 0.030(2) -0.0050(19) -0.0008(17) -0.0121(19) C4 0.038(2) 0.039(2) 0.032(2) -0.0058(19) 0.0048(17) -0.0090(19) C5 0.042(2) 0.053(3) 0.032(2) -0.013(2) 0.0094(18) -0.012(2) C7 0.056(3) 0.069(4) 0.053(3) -0.021(3) -0.003(2) -0.028(3) C8 0.064(3) 0.069(4) 0.072(4) -0.016(3) 0.004(3) -0.036(3) C9 0.094(5) 0.078(5) 0.095(5) -0.003(4) -0.020(4) -0.029(4) C10 0.131(8) 0.080(6) 0.220(12) 0.019(6) -0.011(8) -0.019(7) C11 0.043(2) 0.045(3) 0.035(2) -0.006(2) 0.0010(19) -0.013(2) B1 0.044(3) 0.046(3) 0.035(3) -0.012(2) 0.005(2) -0.012(2) loop_ _atom_type_symbol _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_Cromer_Mann_a1 _atom_type_scat_Cromer_Mann_a2 _atom_type_scat_Cromer_Mann_a3 _atom_type_scat_Cromer_Mann_a4 _atom_type_scat_Cromer_Mann_b1 _atom_type_scat_Cromer_Mann_b2 _atom_type_scat_Cromer_Mann_b3 _atom_type_scat_Cromer_Mann_b4 _atom_type_scat_Cromer_Mann_c _atom_type_scat_source _atom_type_scat_dispersion_source C 0.00347 0.00161 2.31000 1.02000 1.58860 0.86500 20.84390 10.20750 0.56870 51.65120 0.215599998832 'International Tables Volume C Table 6.1.1.4 (pp. 500-502)' 'Henke, Gullikson and Davis, At. Data and Nucl. Data Tables, 1993, 54, 2' B 0.00141 0.00067 2.05450 1.33260 1.09790 0.70680 23.21850 1.02100 60.34980 0.14030 -0.193200007081 'International Tables Volume C Table 6.1.1.4 (pp. 500-502)' 'Henke, Gullikson and Davis, At. Data and Nucl. Data Tables, 1993, 54, 2' F 0.01794 0.01033 3.53920 2.64120 1.51700 1.02430 10.28250 4.29440 0.26150 26.14760 0.277599990368 'International Tables Volume C Table 6.1.1.4 (pp. 500-502)' 'Henke, Gullikson and Davis, At. Data and Nucl. Data Tables, 1993, 54, 2' H 0.00000 0.00000 0.49300 0.32291 0.14019 0.04081 10.51090 26.12570 3.14236 57.79970 0.0030380000826 'International Tables Volume C Table 6.1.1.4 (pp. 500-502)' 'Henke, Gullikson and Davis, At. Data and Nucl. Data Tables, 1993, 54, 2' N 0.00653 0.00323 12.21260 3.13220 2.01250 1.16630 0.00570 9.89330 28.99750 0.58260 -11.5290002823 'International Tables Volume C Table 6.1.1.4 (pp. 500-502)' 'Henke, Gullikson and Davis, At. Data and Nucl. Data Tables, 1993, 54, 2' Br -0.28346 2.55990 17.17890 5.23580 5.63770 3.98510 2.17230 16.57960 0.26090 41.43280 2.95569992065 'International Tables Volume C Table 6.1.1.4 (pp. 500-502)' 'Henke, Gullikson and Davis, At. Data and Nucl. Data Tables, 1993, 54, 2' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C7 N1 H1 117.8(3) C11 N1 H1 117.8(3) C11 N1 C7 124.3(4) C11 N2 N4 112.9(4) B1 N2 N4 128.9(3) B1 N2 C11 118.2(4) C4 N3 C1 107.4(3) B1 N3 C1 130.5(3) B1 N3 C4 121.8(3) C5 N4 N2 114.8(3) N3 C1 Br1 123.0(3) C2 C1 Br1 127.1(3) C2 C1 N3 109.9(4) C1 C2 Br0a 126.2(3) C3 C2 Br0a 127.1(3) C3 C2 C1 106.7(4) C2 C3 Br2 125.8(3) C4 C3 Br2 126.4(3) C4 C3 C2 107.8(4) C3 C4 N3 108.2(3) C5 C4 N3 120.6(4) C5 C4 C3 131.1(4) C4 C5 N4 126.8(4) H5 C5 N4 116.6(2) H5 C5 C4 116.6(2) H7a C7 N1 109.1(3) H7b C7 N1 109.1(3) H7b C7 H7a 107.9 C8 C7 N1 112.4(4) C8 C7 H7a 109.1(3) C8 C7 H7b 109.1(3) H8a C8 C7 109.4(3) H8b C8 C7 109.4(3) H8b C8 H8a 108.0 C9 C8 C7 111.1(5) C9 C8 H8a 109.4(3) C9 C8 H8b 109.4(4) H9a C9 C8 108.6(3) H9b C9 C8 108.6(4) H9b C9 H9a 107.6 C10 C9 C8 114.5(7) C10 C9 H9a 108.6(6) C10 C9 H9b 108.6(6) H10a C10 C9 109.5 H10b C10 C9 109.5 H10b C10 H10a 109.5 H10c C10 C9 109.5 H10c C10 H10a 109.5 H10c C10 H10b 109.5 N2 C11 N1 124.7(4) H11 C11 N1 117.7(3) H11 C11 N2 117.7(2) F2 B1 F1 109.1(4) N2 B1 F1 109.7(4) N2 B1 F2 108.7(4) N3 B1 F1 112.0(4) N3 B1 F2 111.4(4) N3 B1 N2 105.9(3) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance Br0a C2 1.861(4) Br2 C3 1.860(4) Br1 C1 1.688(4) F1 B1 1.365(6) F2 B1 1.389(6) N1 H1 0.8600 N1 C7 1.465(6) N1 C11 1.291(6) N2 N4 1.398(5) N2 C11 1.324(5) N2 B1 1.559(6) N3 C1 1.359(5) N3 C4 1.379(5) N3 B1 1.538(6) N4 C5 1.286(5) C1 C2 1.374(6) C2 C3 1.389(6) C3 C4 1.382(6) C4 C5 1.417(6) C5 H5 0.9300 C7 H7a 0.9700 C7 H7b 0.9700 C7 C8 1.500(8) C8 H8a 0.9700 C8 H8b 0.9700 C8 C9 1.524(9) C9 H9a 0.9700 C9 H9b 0.9700 C9 C10 1.435(10) C10 H10a 0.9600 C10 H10b 0.9600 C10 H10c 0.9600 C11 H11 0.9300