#------------------------------------------------------------------------------ #$Date: 2012-02-10 22:23:03 +0200 (Fri, 10 Feb 2012) $ #$Revision: 32783 $ #$URL: file:///home/coder/svn-repositories/cod/cif/4/4064104.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_4064104 loop_ _publ_author_name 'Cabeza, Javier A.' 'del R\'io, Ignacio' 'P\'erez-Carre\~no, Enrique' 'Pruneda, Vanessa' _publ_section_title ; Reactivity of Cationic Triruthenium Carbonyl Clusters: From Pyrimidinium Ligands to N-Heterocyclic Carbenes ; _journal_issue 5 _journal_name_full Organometallics _journal_page_first 1148 _journal_volume 30 _journal_year 2011 _chemical_formula_moiety 'C14 H8 N2 O9 Ru3' _chemical_formula_sum 'C14 H8 N2 O9 Ru3' _chemical_formula_weight 651.43 _chemical_name_systematic ; ? ; _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.455(2) _cell_angle_beta 94.805(2) _cell_angle_gamma 110.822(2) _cell_formula_units_Z 2 _cell_length_a 8.8891(2) _cell_length_b 8.9331(2) _cell_length_c 12.7932(4) _cell_measurement_reflns_used 21449 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 73.8987 _cell_measurement_theta_min 5.2956 _cell_volume 945.41(4) _computing_cell_refinement ; CrysAlisPro, Oxford Diffraction Ltd., Version 1.171.33.32 (release 27-01-2009 CrysAlis171 .NET) (compiled Jan 27 2009,14:17:37) ; _computing_data_collection ; CrysAlisPro, Oxford Diffraction Ltd., Version 1.171.33.32 (release 27-01-2009 CrysAlis171 .NET) (compiled Jan 27 2009,14:17:37) ; _computing_data_reduction ; CrysAlisPro, Oxford Diffraction Ltd., Version 1.171.33.32 (release 27-01-2009 CrysAlis171 .NET) (compiled Jan 27 2009,14:17:37) ; _computing_molecular_graphics 'PLATON (Spek, 2008)' _computing_publication_material 'SHELXL-97 (Sheldrick, 2008)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 2008)' _computing_structure_solution 'DIRDIF-2008 (Beurskens et al., 2008)' _diffrn_ambient_temperature 293(2) _diffrn_detector_area_resol_mean 8.2640 _diffrn_measured_fraction_theta_full 0.992 _diffrn_measured_fraction_theta_max 0.992 _diffrn_radiation_monochromator mirror _diffrn_radiation_source 'Nova (Cu) X-ray Source' _diffrn_radiation_type 'Cu K\a' _diffrn_radiation_wavelength 1.54184 _diffrn_reflns_av_R_equivalents 0.0640 _diffrn_reflns_av_sigmaI/netI 0.0257 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min -9 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 15 _diffrn_reflns_limit_l_min -15 _diffrn_reflns_number 27829 _diffrn_reflns_theta_full 74.25 _diffrn_reflns_theta_max 74.25 _diffrn_reflns_theta_min 5.30 _exptl_absorpt_coefficient_mu 19.641 _exptl_absorpt_correction_T_max 1.00000 _exptl_absorpt_correction_T_min 0.10737 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details ; CrysAlis RED, Oxford Diffraction Ltd., Version 1.171.33.32 (release 27-01-2009 CrysAlis171 .NET) (compiled Jan 27 2009,14:17:37) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. ; _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 2.288 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plates _exptl_crystal_F_000 620 _exptl_crystal_size_max 0.2258 _exptl_crystal_size_mid 0.1215 _exptl_crystal_size_min 0.0371 _refine_diff_density_max 1.582 _refine_diff_density_min -1.566 _refine_diff_density_rms 0.197 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.013 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 256 _refine_ls_number_reflns 3821 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.013 _refine_ls_R_factor_all 0.0333 _refine_ls_R_factor_gt 0.0318 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details ; calc [1.00000+-1.00000exp(-10.00(sin\q/\l)^2^)]/ [\s^2^(Fo^2^)+0.0000+1.8157*P+(0.0629P)^2^+0.0000sin\q/\l] where P = 0.33333Fo^2^ + 0.66667Fc^2^ ; _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0888 _refine_ls_wR_factor_ref 0.0954 _reflns_number_gt 3669 _reflns_number_total 3821 _reflns_threshold_expression >2\s(I) _[local]_cod_data_source_file om101130g_si_002.cif _[local]_cod_data_source_block 5_(v88f1b) _cod_database_code 4064104 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags C1 C 0.3840(5) 0.3028(5) 0.3285(3) 0.0184(7) Uani 1 1 d . C2 C 0.5362(5) 0.4897(5) 0.2010(3) 0.0231(8) Uani 1 1 d . H2A H 0.5256 0.5905 0.2203 0.028 Uiso 1 1 calc R H2B H 0.5450 0.4869 0.1260 0.028 Uiso 1 1 calc R C3 C 0.6855(5) 0.4775(5) 0.2594(4) 0.0268(9) Uani 1 1 d . H3 H 0.7839 0.5119 0.2302 0.032 Uiso 1 1 calc R C4 C 0.6725(5) 0.4168(5) 0.3528(4) 0.0277(9) Uani 1 1 d . H4 H 0.7646 0.4154 0.3925 0.033 Uiso 1 1 calc R C5 C 0.5184(6) 0.3119(6) 0.5048(3) 0.0296(10) Uani 1 1 d . H5A H 0.5356 0.2122 0.5122 0.044 Uiso 1 1 calc R H5B H 0.4158 0.3017 0.5287 0.044 Uiso 1 1 calc R H5C H 0.6029 0.3948 0.5460 0.044 Uiso 1 1 calc R C101 C 0.0844(5) 0.2491(5) 0.4401(3) 0.0245(8) Uani 1 1 d . C102 C 0.2246(5) 0.0043(5) 0.4355(3) 0.0255(9) Uani 1 1 d . C103 C -0.0537(5) -0.0296(5) 0.2993(3) 0.0240(8) Uani 1 1 d . C201 C 0.1313(5) 0.4895(5) 0.2671(3) 0.0226(8) Uani 1 1 d . C202 C 0.1906(5) 0.4568(5) 0.0520(3) 0.0202(8) Uani 1 1 d . C203 C -0.0791(5) 0.2313(5) 0.1481(3) 0.0199(8) Uani 1 1 d . C301 C 0.4499(5) 0.0251(5) 0.2423(3) 0.0250(9) Uani 1 1 d . C302 C 0.4114(5) 0.1474(5) 0.0348(3) 0.0217(8) Uani 1 1 d . C303 C 0.1584(5) -0.1029(5) 0.1345(3) 0.0239(8) Uani 1 1 d . N1 N 0.3915(4) 0.3539(4) 0.2275(3) 0.0183(6) Uani 1 1 d . N2 N 0.5199(4) 0.3532(4) 0.3944(3) 0.0227(7) Uani 1 1 d . O101 O 0.0476(5) 0.3245(5) 0.4988(3) 0.0373(8) Uani 1 1 d . O102 O 0.2684(5) -0.0732(4) 0.4930(3) 0.0356(8) Uani 1 1 d . O103 O -0.1750(4) -0.1272(4) 0.2733(3) 0.0366(8) Uani 1 1 d . O201 O 0.1215(5) 0.5871(4) 0.3207(3) 0.0348(8) Uani 1 1 d . O202 O 0.2065(4) 0.5317(4) -0.0197(3) 0.0303(7) Uani 1 1 d . O203 O -0.2150(4) 0.1679(4) 0.1299(3) 0.0286(7) Uani 1 1 d . O301 O 0.5288(5) -0.0303(5) 0.2894(3) 0.0356(8) Uani 1 1 d . O302 O 0.4711(4) 0.1682(4) -0.0410(3) 0.0320(7) Uani 1 1 d . O303 O 0.0672(5) -0.2301(4) 0.1155(3) 0.0355(8) Uani 1 1 d . Ru1 Ru 0.15582(3) 0.13524(3) 0.34099(2) 0.01704(12) Uani 1 1 d . Ru2 Ru 0.14865(3) 0.32751(3) 0.17625(2) 0.01563(12) Uani 1 1 d . Ru3 Ru 0.30437(3) 0.10831(3) 0.16512(2) 0.01616(12) Uani 1 1 d . H100 H 0.155(9) 0.163(9) 0.098(6) 0.050 Uiso 1 1 d . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 C1 0.0174(18) 0.0216(18) 0.0219(17) -0.0039(14) -0.0004(14) 0.0145(15) C2 0.0145(19) 0.024(2) 0.030(2) 0.0026(15) 0.0013(15) 0.0054(15) C3 0.0156(19) 0.0231(19) 0.039(2) -0.0031(17) 0.0009(16) 0.0037(15) C4 0.017(2) 0.027(2) 0.039(2) -0.0059(17) -0.0076(17) 0.0099(16) C5 0.032(2) 0.040(2) 0.023(2) -0.0051(17) -0.0083(17) 0.023(2) C101 0.022(2) 0.031(2) 0.0235(19) 0.0004(16) 0.0019(15) 0.0124(17) C102 0.021(2) 0.028(2) 0.026(2) 0.0036(16) 0.0047(16) 0.0067(17) C103 0.027(2) 0.026(2) 0.0246(19) 0.0061(15) 0.0030(16) 0.0155(18) C201 0.0175(19) 0.028(2) 0.0263(19) -0.0001(16) -0.0020(15) 0.0142(16) C202 0.0122(18) 0.0229(19) 0.0265(19) 0.0012(15) 0.0013(14) 0.0076(14) C203 0.020(2) 0.0215(18) 0.0218(18) 0.0021(14) 0.0036(14) 0.0116(16) C301 0.026(2) 0.028(2) 0.0206(18) -0.0001(15) 0.0050(16) 0.0088(17) C302 0.0201(19) 0.0213(19) 0.0229(19) 0.0004(15) 0.0019(15) 0.0065(15) C303 0.027(2) 0.028(2) 0.0183(18) -0.0002(15) -0.0011(15) 0.0117(18) N1 0.0153(16) 0.0183(15) 0.0204(15) -0.0004(12) 0.0004(12) 0.0054(12) N2 0.0187(17) 0.0253(17) 0.0238(17) -0.0073(13) -0.0044(13) 0.0092(14) O101 0.0340(19) 0.0382(19) 0.0377(18) -0.0097(15) 0.0109(15) 0.0090(15) O102 0.0366(19) 0.0395(19) 0.0348(17) 0.0147(14) 0.0014(14) 0.0187(15) O103 0.0256(17) 0.0258(16) 0.052(2) 0.0035(14) -0.0019(15) 0.0025(14) O201 0.040(2) 0.0397(19) 0.0331(17) -0.0081(14) -0.0030(14) 0.0255(16) O202 0.0290(17) 0.0341(17) 0.0278(15) 0.0107(13) 0.0069(12) 0.0100(13) O203 0.0186(16) 0.0283(15) 0.0377(17) 0.0051(13) -0.0006(12) 0.0074(13) O301 0.0372(19) 0.052(2) 0.0294(16) 0.0066(15) -0.0024(14) 0.0309(17) O302 0.0363(19) 0.0336(17) 0.0261(16) 0.0021(13) 0.0115(14) 0.0104(14) O303 0.045(2) 0.0215(16) 0.0311(16) -0.0034(12) -0.0021(14) 0.0018(15) Ru1 0.01715(18) 0.01994(18) 0.01511(16) 0.00132(11) 0.00159(11) 0.00792(12) Ru2 0.01427(18) 0.01762(17) 0.01572(16) 0.00068(10) 0.00015(11) 0.00685(12) Ru3 0.01621(18) 0.01843(18) 0.01510(16) -0.00058(11) 0.00057(11) 0.00794(12) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0181 0.0091 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0311 0.0180 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0492 0.0322 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Ru Ru 0.0552 3.2960 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle N2 C1 N1 118.6(4) N2 C1 Ru1 132.6(3) N1 C1 Ru1 108.4(3) N2 C1 Ru3 130.4(3) N1 C1 Ru3 56.91(19) Ru1 C1 Ru3 71.45(11) N1 C2 C3 109.5(3) N1 C2 H2A 109.8 C3 C2 H2A 109.8 N1 C2 H2B 109.8 C3 C2 H2B 109.8 H2A C2 H2B 108.2 C4 C3 C2 118.0(4) C4 C3 H3 121.0 C2 C3 H3 121.0 C3 C4 N2 121.1(4) C3 C4 H4 119.5 N2 C4 H4 119.5 N2 C5 H5A 109.5 N2 C5 H5B 109.5 H5A C5 H5B 109.5 N2 C5 H5C 109.5 H5A C5 H5C 109.5 H5B C5 H5C 109.5 O101 C101 Ru1 176.6(4) O102 C102 Ru1 179.0(4) O103 C103 Ru1 178.6(4) O201 C201 Ru2 179.4(4) O202 C202 Ru2 176.2(4) O203 C203 Ru2 177.2(4) O301 C301 Ru3 176.4(4) O302 C302 Ru3 179.0(4) O303 C303 Ru3 178.6(4) C1 N1 C2 119.2(3) C1 N1 Ru2 104.3(2) C2 N1 Ru2 124.3(3) C1 N1 Ru3 91.1(2) C2 N1 Ru3 127.9(3) Ru2 N1 Ru3 80.50(11) C1 N2 C4 119.4(4) C1 N2 C5 121.4(4) C4 N2 C5 117.7(4) C102 Ru1 C101 98.42(19) C102 Ru1 C103 94.52(18) C101 Ru1 C103 97.16(19) C102 Ru1 C1 95.82(17) C101 Ru1 C1 98.79(17) C103 Ru1 C1 159.49(17) C102 Ru1 Ru2 160.80(14) C101 Ru1 Ru2 96.38(13) C103 Ru1 Ru2 95.70(12) C1 Ru1 Ru2 69.79(11) C102 Ru1 Ru3 101.76(14) C101 Ru1 Ru3 154.00(14) C103 Ru1 Ru3 97.42(13) C1 Ru1 Ru3 63.12(11) Ru2 Ru1 Ru3 60.797(10) C203 Ru2 C201 92.40(17) C203 Ru2 C202 97.69(17) C201 Ru2 C202 96.37(18) C203 Ru2 N1 159.82(15) C201 Ru2 N1 97.61(15) C202 Ru2 N1 98.55(15) C203 Ru2 Ru1 92.85(12) C201 Ru2 Ru1 91.74(13) C202 Ru2 Ru1 166.40(12) N1 Ru2 Ru1 69.47(9) C203 Ru2 Ru3 112.78(12) C201 Ru2 Ru3 141.55(12) C202 Ru2 Ru3 107.80(12) N1 Ru2 Ru3 50.36(9) Ru1 Ru2 Ru3 59.828(10) C303 Ru3 C301 89.62(19) C303 Ru3 C302 99.57(17) C301 Ru3 C302 97.56(18) C303 Ru3 N1 157.91(16) C301 Ru3 N1 101.19(16) C302 Ru3 N1 98.03(15) C303 Ru3 C1 134.95(16) C301 Ru3 C1 80.85(15) C302 Ru3 C1 125.23(15) N1 Ru3 C1 31.99(13) C303 Ru3 Ru1 91.77(13) C301 Ru3 Ru1 92.68(12) C302 Ru3 Ru1 164.72(12) N1 Ru3 Ru1 68.74(9) C1 Ru3 Ru1 45.43(9) C303 Ru3 Ru2 112.42(14) C301 Ru3 Ru2 143.49(13) C302 Ru3 Ru2 106.41(12) N1 Ru3 Ru2 49.14(9) C1 Ru3 Ru2 62.88(8) Ru1 Ru3 Ru2 59.375(10) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance C1 N2 1.345(5) C1 N1 1.372(5) C1 Ru1 2.069(4) C1 Ru3 2.590(4) C2 N1 1.488(5) C2 C3 1.506(6) C2 H2A 0.9700 C2 H2B 0.9700 C3 C4 1.313(7) C3 H3 0.9300 C4 N2 1.423(6) C4 H4 0.9300 C5 N2 1.462(6) C5 H5A 0.9600 C5 H5B 0.9600 C5 H5C 0.9600 C101 O101 1.147(6) C101 Ru1 1.902(4) C102 O102 1.150(6) C102 Ru1 1.901(5) C103 O103 1.140(6) C103 Ru1 1.948(5) C201 O201 1.137(6) C201 Ru2 1.905(4) C202 O202 1.129(5) C202 Ru2 1.955(4) C203 O203 1.139(5) C203 Ru2 1.898(4) C301 O301 1.132(6) C301 Ru3 1.919(5) C302 O302 1.128(6) C302 Ru3 1.962(4) C303 O303 1.146(6) C303 Ru3 1.887(4) N1 Ru2 2.132(3) N1 Ru3 2.170(3) Ru1 Ru2 2.7402(4) Ru1 Ru3 2.7530(4) Ru2 Ru3 2.7797(4) Ru2 H100 1.79(8) Ru3 H100 1.74(8)