#------------------------------------------------------------------------------ #$Date: 2016-03-21 06:59:19 +0200 (Mon, 21 Mar 2016) $ #$Revision: 178543 $ #$URL: file:///home/coder/svn-repositories/cod/cif/4/06/49/4064952.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_4064952 loop_ _publ_author_name 'Thomas, Helen R.' 'Deeth, Robert J.' 'Clarkson, Guy J.' 'Rourke, Jonathan P.' _publ_section_title ; Palladium(II) Agostic Complex: Exchange of Aryl--Pd and Alkyl--Pd Bonds ; _journal_issue 21 _journal_name_full Organometallics _journal_page_first 5641 _journal_paper_doi 10.1021/om200451v _journal_volume 30 _journal_year 2011 _chemical_formula_sum 'C15 H15 Cl F N Pd' _chemical_formula_weight 370.13 _chemical_name_systematic ; ? ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 105.875(5) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 8.9157(4) _cell_length_b 22.9239(9) _cell_length_c 6.9415(3) _cell_measurement_reflns_used 7711 _cell_measurement_temperature 100(2) _cell_measurement_theta_max 30.15 _cell_measurement_theta_min 3.04 _cell_volume 1364.61(11) _computing_cell_refinement 'CrysAlis RED, Oxford Diffraction Ltd' _computing_data_collection 'CrysAlis CCD, Oxford Diffraction Ltd' _computing_data_reduction 'CrysAlis RED, Oxford Diffraction Ltd' _computing_molecular_graphics 'SHELXTL (Sheldrick, 1997)' _computing_publication_material 'SHELXTL (Sheldrick, 1997)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 100(2) _diffrn_detector_area_resol_mean 10.2833 _diffrn_measured_fraction_theta_full 0.998 _diffrn_measured_fraction_theta_max 0.910 _diffrn_measurement_device_type 'Oxford Diffraction Gemini R' _diffrn_measurement_method '\f & \w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'Enhance (Mo) X-ray Source' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0430 _diffrn_reflns_av_sigmaI/netI 0.0388 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min -12 _diffrn_reflns_limit_k_max 30 _diffrn_reflns_limit_k_min -30 _diffrn_reflns_limit_l_max 9 _diffrn_reflns_limit_l_min -7 _diffrn_reflns_number 12607 _diffrn_reflns_theta_full 28.00 _diffrn_reflns_theta_max 30.22 _diffrn_reflns_theta_min 3.05 _diffrn_standards_decay_% nil _exptl_absorpt_coefficient_mu 1.551 _exptl_absorpt_correction_T_max 1.00 _exptl_absorpt_correction_T_min 0.84 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details 'ABSPACK(CrysAlis, Oxford Diffraction)' _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.802 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 736 _exptl_crystal_size_max 0.20 _exptl_crystal_size_mid 0.06 _exptl_crystal_size_min 0.06 _refine_diff_density_max 10.208 _refine_diff_density_min -1.878 _refine_diff_density_rms 0.394 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.136 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 175 _refine_ls_number_reflns 3689 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.136 _refine_ls_R_factor_all 0.0974 _refine_ls_R_factor_gt 0.0911 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.1360P)^2^+29.0140P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.2492 _refine_ls_wR_factor_ref 0.2545 _reflns_number_gt 3281 _reflns_number_total 3689 _reflns_threshold_expression >2sigma(I) _cod_data_source_file om200451v_si_004.cif _cod_data_source_block comp4 _cod_original_cell_volume 1364.62(10) _cod_original_sg_symbol_H-M P2(1)/c _cod_database_code 4064952 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags Pd1 Pd 0.27269(7) 0.73158(2) 0.70943(10) 0.0111(2) Uani 1 1 d . Cl1 Cl 0.0895(2) 0.80515(9) 0.6634(3) 0.0165(4) Uani 1 1 d . N1 N 0.4330(8) 0.6675(3) 0.7453(11) 0.0116(13) Uani 1 1 d . C2 C 0.4009(10) 0.6094(4) 0.7350(13) 0.0145(15) Uani 1 1 d . C3 C 0.5212(11) 0.5694(4) 0.7608(14) 0.0177(16) Uani 1 1 d . H3A H 0.4986 0.5288 0.7515 0.021 Uiso 1 1 calc R C4 C 0.6738(11) 0.5881(4) 0.8002(14) 0.0194(17) Uani 1 1 d . H4A H 0.7561 0.5605 0.8200 0.023 Uiso 1 1 calc R C5 C 0.7066(10) 0.6474(4) 0.8107(13) 0.0161(16) Uani 1 1 d . H5A H 0.8111 0.6610 0.8382 0.019 Uiso 1 1 calc R C6 C 0.5839(10) 0.6864(4) 0.7802(12) 0.0132(15) Uani 1 1 d . C7 C 0.5967(10) 0.7497(4) 0.7839(11) 0.0118(14) Uani 1 1 d . C8 C 0.4557(9) 0.7819(4) 0.7536(12) 0.0114(14) Uani 1 1 d . C9 C 0.4569(9) 0.8423(3) 0.7567(13) 0.0129(15) Uani 1 1 d . H9A H 0.3639 0.8642 0.7415 0.016 Uiso 1 1 calc R C10 C 0.6004(10) 0.8693(3) 0.7830(13) 0.0138(15) Uani 1 1 d . F10 F 0.6033(7) 0.9290(2) 0.7857(9) 0.0221(12) Uani 1 1 d . C11 C 0.7396(10) 0.8402(4) 0.8073(13) 0.0169(16) Uani 1 1 d . H11A H 0.8343 0.8610 0.8216 0.020 Uiso 1 1 calc R C12 C 0.7369(10) 0.7795(4) 0.8105(14) 0.0154(15) Uani 1 1 d . H12A H 0.8315 0.7582 0.8309 0.018 Uiso 1 1 calc R C13 C 0.2300(10) 0.5890(4) 0.6927(14) 0.0155(15) Uani 1 1 d . C14 C 0.1876(11) 0.5554(4) 0.4909(14) 0.0190(17) Uani 1 1 d . H14A H 0.2033 0.5809 0.3847 0.028 Uiso 1 1 calc R H14B H 0.0782 0.5432 0.4580 0.028 Uiso 1 1 calc R H14C H 0.2545 0.5209 0.5025 0.028 Uiso 1 1 calc R C15 C 0.2135(11) 0.5479(4) 0.8618(14) 0.0202(18) Uani 1 1 d . H15B H 0.2445 0.5686 0.9901 0.030 Uiso 1 1 calc R H15C H 0.2807 0.5137 0.8674 0.030 Uiso 1 1 calc R H15A H 0.1048 0.5352 0.8353 0.030 Uiso 1 1 calc R C16 C 0.1146(10) 0.6399(4) 0.6804(15) 0.0199(17) Uani 1 1 d . H16C H 0.1416 0.6613 0.8074 0.030 Uiso 1 1 calc R H16A H 0.0084 0.6245 0.6544 0.030 Uiso 1 1 calc R H16B H 0.1205 0.6663 0.5715 0.030 Uiso 1 1 calc R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Pd1 0.0094(3) 0.0072(3) 0.0168(4) -0.00025(19) 0.0039(2) -0.00013(18) Cl1 0.0123(8) 0.0132(9) 0.0243(10) 0.0001(7) 0.0056(7) 0.0031(7) N1 0.013(3) 0.007(3) 0.017(3) 0.000(2) 0.008(3) 0.001(2) C2 0.016(4) 0.009(3) 0.019(4) 0.001(3) 0.005(3) -0.002(3) C3 0.023(4) 0.006(3) 0.024(4) -0.002(3) 0.007(3) 0.002(3) C4 0.021(4) 0.011(4) 0.027(5) -0.001(3) 0.008(4) 0.003(3) C5 0.016(4) 0.010(4) 0.020(4) -0.003(3) 0.003(3) 0.002(3) C6 0.012(4) 0.014(4) 0.015(4) -0.003(3) 0.006(3) -0.003(3) C7 0.016(4) 0.009(3) 0.012(3) -0.001(3) 0.006(3) -0.002(3) C8 0.009(3) 0.011(3) 0.014(4) 0.002(3) 0.005(3) 0.000(3) C9 0.011(3) 0.008(3) 0.018(4) 0.000(3) 0.002(3) -0.005(3) C10 0.019(4) 0.005(3) 0.019(4) 0.001(3) 0.007(3) -0.004(3) F10 0.027(3) 0.003(2) 0.037(3) -0.001(2) 0.010(2) -0.0039(19) C11 0.018(4) 0.012(4) 0.021(4) -0.001(3) 0.006(3) -0.004(3) C12 0.012(4) 0.012(4) 0.022(4) -0.002(3) 0.005(3) -0.001(3) C13 0.013(4) 0.011(3) 0.025(4) 0.000(3) 0.008(3) -0.003(3) C14 0.021(4) 0.013(4) 0.023(4) -0.003(3) 0.007(3) -0.006(3) C15 0.024(5) 0.018(4) 0.022(4) 0.003(3) 0.011(4) -0.005(3) C16 0.013(4) 0.019(4) 0.028(5) -0.004(3) 0.005(3) -0.009(3) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' F F 0.0171 0.0103 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Pd Pd -0.9988 1.0072 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C8 Pd1 N1 83.0(3) C8 Pd1 Cl1 96.8(2) N1 Pd1 Cl1 179.1(2) C8 Pd1 C16 159.2(3) N1 Pd1 C16 76.3(3) Cl1 Pd1 C16 103.9(2) C2 N1 C6 120.2(7) C2 N1 Pd1 125.1(6) C6 N1 Pd1 114.7(5) N1 C2 C3 119.8(8) N1 C2 C13 119.3(7) C3 C2 C13 120.8(7) C4 C3 C2 120.4(8) C4 C3 H3A 119.8 C2 C3 H3A 119.8 C3 C4 C5 119.8(8) C3 C4 H4A 120.1 C5 C4 H4A 120.1 C6 C5 C4 118.6(8) C6 C5 H5A 120.7 C4 C5 H5A 120.7 N1 C6 C5 121.3(8) N1 C6 C7 112.8(7) C5 C6 C7 125.9(8) C12 C7 C8 119.3(8) C12 C7 C6 123.7(8) C8 C7 C6 117.0(7) C9 C8 C7 120.9(7) C9 C8 Pd1 126.6(6) C7 C8 Pd1 112.5(6) C8 C9 C10 116.8(8) C8 C9 H9A 121.6 C10 C9 H9A 121.6 F10 C10 C11 118.0(7) F10 C10 C9 117.4(7) C11 C10 C9 124.6(7) C10 C11 C12 117.8(8) C10 C11 H11A 121.1 C12 C11 H11A 121.1 C7 C12 C11 120.4(8) C7 C12 H12A 119.8 C11 C12 H12A 119.8 C16 C13 C2 112.9(7) C16 C13 C15 107.7(7) C2 C13 C15 109.6(7) C16 C13 C14 109.4(8) C2 C13 C14 107.9(7) C15 C13 C14 109.4(7) C13 C14 H14A 109.5 C13 C14 H14B 109.5 H14A C14 H14B 109.5 C13 C14 H14C 109.5 H14A C14 H14C 109.5 H14B C14 H14C 109.5 C13 C15 H15B 109.5 C13 C15 H15C 109.5 H15B C15 H15C 109.5 C13 C15 H15A 109.5 H15B C15 H15A 109.5 H15C C15 H15A 109.5 C13 C16 Pd1 106.2(5) C13 C16 H16C 109.5 Pd1 C16 H16C 60.9 C13 C16 H16A 109.5 Pd1 C16 H16A 144.1 H16C C16 H16A 109.5 C13 C16 H16B 109.5 Pd1 C16 H16B 53.0 H16C C16 H16B 109.5 H16A C16 H16B 109.5 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance Pd1 C8 1.953(8) Pd1 N1 2.018(7) Pd1 Cl1 2.308(2) Pd1 C16 2.507(9) N1 C2 1.359(10) N1 C6 1.371(10) C2 C3 1.386(12) C2 C13 1.543(12) C3 C4 1.381(13) C3 H3A 0.9500 C4 C5 1.389(12) C4 H4A 0.9500 C5 C6 1.383(12) C5 H5A 0.9500 C6 C7 1.455(11) C7 C12 1.392(11) C7 C8 1.423(11) C8 C9 1.384(11) C9 C10 1.388(11) C9 H9A 0.9500 C10 F10 1.368(9) C10 C11 1.377(12) C11 C12 1.393(12) C11 H11A 0.9500 C12 H12A 0.9500 C13 C16 1.543(13) C13 C15 1.544(12) C13 C14 1.552(13) C14 H14A 0.9800 C14 H14B 0.9800 C14 H14C 0.9800 C15 H15B 0.9800 C15 H15C 0.9800 C15 H15A 0.9800 C16 H16C 0.9800 C16 H16A 0.9800 C16 H16B 0.9800 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A C3 H3A F10 0.95 2.45 3.391(10) 170.9 2_646 C16 H16C Cl1 0.98 2.75 3.645(10) 152.8 4_576 C16 H16B Cl1 0.98 2.85 3.752(10) 153.9 4_575