#------------------------------------------------------------------------------ #$Date: 2012-04-11 17:00:54 +0300 (Wed, 11 Apr 2012) $ #$Revision: 52448 $ #$URL: file:///home/coder/svn-repositories/cod/cif/4/10/56/4105687.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_4105687 loop_ _publ_author_name 'Dorine Belmessieri' 'Louis C. Morrill' 'Carmen Simal' 'Alexandra M. Z. Slawin' 'Andrew D. Smith' _publ_section_title ; Organocatalytic Functionalization of Carboxylic Acids: Isothiourea-Catalyzed Asymmetric Intra- and Intermolecular Michael Addition-Lactonizations ; _journal_name_full 'Journal of the American Chemical Society' _journal_page_first 2714 _journal_page_last 2720 _journal_volume 133 _journal_year 2011 _chemical_absolute_configuration ad _chemical_formula_moiety 'C18 H15 Cl O4' _chemical_formula_sum 'C18 H15 Cl O4' _chemical_formula_weight 330.75 _chemical_name_systematic ; ? ; _space_group_IT_number 4 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall 'P 2yb' _symmetry_space_group_name_H-M 'P 1 21 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 109.81(4) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 9.998(8) _cell_length_b 6.545(6) _cell_length_c 13.109(10) _cell_measurement_reflns_used 2510 _cell_measurement_temperature 93(2) _cell_measurement_theta_max 28.3 _cell_measurement_theta_min 2.2 _cell_volume 807.0(12) _computing_cell_refinement 'CrystalClear (Rigaku Corp., 2004)' _computing_data_collection 'CrystalClear (Rigaku Corp., 2004)' _computing_data_reduction 'CrystalClear (Rigaku Corp., 2004)' _computing_molecular_graphics 'Bruker SHELXTL' _computing_publication_material 'Bruker SHELXTL' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 93(2) _diffrn_measured_fraction_theta_full 0.994 _diffrn_measured_fraction_theta_max 0.982 _diffrn_measurement_device_type CCD _diffrn_measurement_method '\w and \f scans' _diffrn_radiation_monochromator confocal _diffrn_radiation_source 'rotating anode' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0871 _diffrn_reflns_av_sigmaI/netI 0.1114 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min -12 _diffrn_reflns_limit_k_max 7 _diffrn_reflns_limit_k_min -7 _diffrn_reflns_limit_l_max 14 _diffrn_reflns_limit_l_min -15 _diffrn_reflns_number 5016 _diffrn_reflns_theta_full 25.00 _diffrn_reflns_theta_max 25.37 _diffrn_reflns_theta_min 2.17 _exptl_absorpt_coefficient_mu 0.254 _exptl_absorpt_correction_T_max 1.000 _exptl_absorpt_correction_T_min 0.9238 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details 'Jacobson, R. (1998) Private communication' _exptl_crystal_colour Colorless _exptl_crystal_density_diffrn 1.361 _exptl_crystal_description Platelet _exptl_crystal_F_000 344 _exptl_crystal_size_max 0.15 _exptl_crystal_size_mid 0.10 _exptl_crystal_size_min 0.01 _refine_diff_density_max 0.593 _refine_diff_density_min -0.414 _refine_diff_density_rms 0.093 _refine_ls_abs_structure_details 'Flack H D (1983), Acta Cryst. A39, 876-881' _refine_ls_abs_structure_Flack 0.13(18) _refine_ls_extinction_coef 0.095(16) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXL _refine_ls_goodness_of_fit_ref 1.057 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 210 _refine_ls_number_reflns 2773 _refine_ls_number_restraints 1 _refine_ls_restrained_S_all 1.056 _refine_ls_R_factor_all 0.1205 _refine_ls_R_factor_gt 0.0948 _refine_ls_shift/su_max 0.002 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.1292P)^2^+0.3271P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.2298 _refine_ls_wR_factor_ref 0.2609 _reflns_number_gt 1986 _reflns_number_total 2773 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file ja109975c_si_004.cif _[local]_cod_data_source_block 21 _cod_original_cell_volume 807.0(11) _cod_database_code 4105687 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags O1 O 0.7160(5) -0.0256(7) 0.3328(4) 0.0498(12) Uani 1 1 d . C1 C 0.7226(6) 0.0534(11) 0.4371(5) 0.0447(16) Uani 1 1 d . H1A H 0.6775 -0.0449 0.4740 0.054 Uiso 1 1 calc R C2 C 0.6358(6) 0.2586(9) 0.4119(5) 0.0414(15) Uani 1 1 d . H2A H 0.5351 0.2280 0.4049 0.050 Uiso 1 1 calc R C2A C 0.6408(6) 0.3065(10) 0.3009(6) 0.0446(16) Uani 1 1 d . C3 C 0.6043(6) 0.4814(11) 0.2391(6) 0.0509(17) Uani 1 1 d . H3A H 0.5744 0.6012 0.2663 0.061 Uiso 1 1 calc R C4 C 0.6130(7) 0.4757(11) 0.1336(6) 0.0519(17) Uani 1 1 d . H4A H 0.5873 0.5934 0.0887 0.062 Uiso 1 1 calc R C5 C 0.6583(7) 0.3017(12) 0.0942(7) 0.0575(19) Uani 1 1 d . H5A H 0.6645 0.3024 0.0234 0.069 Uiso 1 1 calc R C6 C 0.6950(7) 0.1252(13) 0.1579(6) 0.0546(18) Uani 1 1 d . H6A H 0.7241 0.0036 0.1318 0.065 Uiso 1 1 calc R C6A C 0.6865(6) 0.1372(10) 0.2610(6) 0.0443(16) Uani 1 1 d . O7 O 0.9737(4) 0.1122(7) 0.4688(4) 0.0518(13) Uani 1 1 d . C7 C 0.8780(6) 0.0858(10) 0.5051(6) 0.0454(16) Uani 1 1 d . O8 O 0.8930(4) 0.0916(7) 0.6101(4) 0.0466(12) Uani 1 1 d . C8 C 1.0352(6) 0.1338(12) 0.6851(6) 0.0542(18) Uani 1 1 d . H8A H 1.0952 0.0130 0.6911 0.081 Uiso 1 1 calc R H8B H 1.0301 0.1675 0.7565 0.081 Uiso 1 1 calc R H8C H 1.0759 0.2493 0.6581 0.081 Uiso 1 1 calc R C9 C 0.6922(6) 0.4247(9) 0.4989(5) 0.0417(15) Uani 1 1 d . H9A H 0.7965 0.4362 0.5174 0.050 Uiso 1 1 calc R H9B H 0.6497 0.5577 0.4689 0.050 Uiso 1 1 calc R O10 O 0.5713(4) 0.2494(7) 0.6017(4) 0.0499(12) Uani 1 1 d . C10 C 0.6590(6) 0.3804(11) 0.6004(5) 0.0445(15) Uani 1 1 d . C11 C 0.7265(6) 0.5053(10) 0.7000(5) 0.0431(15) Uani 1 1 d . C12 C 0.8513(7) 0.6199(11) 0.7170(6) 0.0467(15) Uani 1 1 d . H12A H 0.8978 0.6190 0.6647 0.056 Uiso 1 1 calc R C13 C 0.9055(7) 0.7346(10) 0.8115(6) 0.0483(16) Uani 1 1 d . H13A H 0.9907 0.8102 0.8240 0.058 Uiso 1 1 calc R Cl14 Cl 0.9076(2) 0.8895(3) 1.00167(16) 0.0647(7) Uani 1 1 d . C14 C 0.8380(7) 0.7407(10) 0.8874(6) 0.0478(16) Uani 1 1 d . C15 C 0.7129(7) 0.6333(11) 0.8705(6) 0.0481(16) Uani 1 1 d . H15A H 0.6634 0.6438 0.9206 0.058 Uiso 1 1 calc R C16 C 0.6602(6) 0.5088(10) 0.7783(6) 0.0495(17) Uani 1 1 d . H16A H 0.5788 0.4262 0.7691 0.059 Uiso 1 1 calc R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O1 0.045(2) 0.045(3) 0.061(3) -0.002(2) 0.020(2) 0.001(2) C1 0.038(3) 0.042(4) 0.056(4) 0.002(3) 0.018(3) 0.007(3) C2 0.030(3) 0.034(3) 0.059(4) -0.001(3) 0.013(3) 0.002(3) C2A 0.034(3) 0.040(4) 0.064(4) 0.002(3) 0.022(3) -0.003(3) C3 0.040(3) 0.042(4) 0.076(5) -0.008(4) 0.026(3) -0.001(3) C4 0.040(3) 0.054(4) 0.060(4) 0.006(4) 0.015(3) -0.002(3) C5 0.046(4) 0.065(5) 0.065(5) -0.007(4) 0.023(3) -0.007(3) C6 0.040(4) 0.054(4) 0.071(5) -0.007(4) 0.021(3) -0.003(3) C6A 0.034(3) 0.034(3) 0.066(4) -0.004(3) 0.018(3) -0.002(3) O7 0.035(2) 0.046(3) 0.081(3) 0.002(3) 0.030(2) 0.000(2) C7 0.033(3) 0.026(3) 0.077(5) 0.006(3) 0.019(3) 0.001(2) O8 0.035(2) 0.047(3) 0.062(3) 0.003(2) 0.020(2) -0.003(2) C8 0.028(3) 0.050(4) 0.080(5) 0.013(4) 0.013(3) -0.003(3) C9 0.026(3) 0.034(4) 0.063(4) -0.001(3) 0.013(3) -0.001(2) O10 0.040(2) 0.047(3) 0.066(3) -0.005(2) 0.023(2) -0.011(2) C10 0.025(3) 0.048(4) 0.064(4) -0.004(3) 0.019(3) -0.001(3) C11 0.032(3) 0.036(3) 0.063(4) -0.005(3) 0.018(3) -0.003(3) C12 0.043(3) 0.042(3) 0.061(4) -0.002(3) 0.024(3) 0.000(3) C13 0.047(4) 0.044(4) 0.061(4) -0.010(3) 0.027(3) -0.014(3) Cl14 0.0639(11) 0.0653(13) 0.0703(13) -0.0180(10) 0.0296(9) -0.0116(9) C14 0.046(3) 0.039(4) 0.059(4) -0.008(3) 0.018(3) 0.002(3) C15 0.041(3) 0.054(4) 0.058(4) -0.001(4) 0.027(3) -0.004(3) C16 0.039(3) 0.051(4) 0.064(4) 0.012(4) 0.024(3) 0.006(3) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C6A O1 C1 107.4(5) O1 C1 C7 108.3(5) O1 C1 C2 105.2(5) C7 C1 C2 112.7(5) O1 C1 H1A 110.2 C7 C1 H1A 110.2 C2 C1 H1A 110.2 C2A C2 C9 116.4(5) C2A C2 C1 100.6(5) C9 C2 C1 114.3(5) C2A C2 H2A 108.4 C9 C2 H2A 108.4 C1 C2 H2A 108.4 C6A C2A C3 120.3(7) C6A C2A C2 109.0(6) C3 C2A C2 130.7(6) C2A C3 C4 117.4(6) C2A C3 H3A 121.3 C4 C3 H3A 121.3 C5 C4 C3 121.4(7) C5 C4 H4A 119.3 C3 C4 H4A 119.3 C4 C5 C6 120.5(7) C4 C5 H5A 119.8 C6 C5 H5A 119.8 C6A C6 C5 116.5(7) C6A C6 H6A 121.8 C5 C6 H6A 121.8 C2A C6A O1 112.7(6) C2A C6A C6 123.9(7) O1 C6A C6 123.3(6) O7 C7 O8 124.8(6) O7 C7 C1 125.0(6) O8 C7 C1 110.1(5) C7 O8 C8 116.4(5) O8 C8 H8A 109.5 O8 C8 H8B 109.5 H8A C8 H8B 109.5 O8 C8 H8C 109.5 H8A C8 H8C 109.5 H8B C8 H8C 109.5 C10 C9 C2 112.6(5) C10 C9 H9A 109.1 C2 C9 H9A 109.1 C10 C9 H9B 109.1 C2 C9 H9B 109.1 H9A C9 H9B 107.8 O10 C10 C11 118.8(6) O10 C10 C9 121.3(6) C11 C10 C9 119.9(5) C16 C11 C12 119.4(6) C16 C11 C10 117.7(5) C12 C11 C10 122.9(6) C13 C12 C11 119.0(6) C13 C12 H12A 120.5 C11 C12 H12A 120.5 C14 C13 C12 121.3(6) C14 C13 H13A 119.3 C12 C13 H13A 119.3 C13 C14 C15 120.3(6) C13 C14 Cl14 119.5(5) C15 C14 Cl14 120.2(5) C14 C15 C16 119.2(6) C14 C15 H15A 120.4 C16 C15 H15A 120.4 C11 C16 C15 120.6(6) C11 C16 H16A 119.7 C15 C16 H16A 119.7 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance O1 C6A 1.385(8) O1 C1 1.443(8) C1 C7 1.522(8) C1 C2 1.571(9) C1 H1A 1.0000 C2 C2A 1.507(10) C2 C9 1.538(9) C2 H2A 1.0000 C2A C6A 1.368(9) C2A C3 1.378(10) C3 C4 1.416(10) C3 H3A 0.9500 C4 C5 1.388(10) C4 H4A 0.9500 C5 C6 1.399(11) C5 H5A 0.9500 C6 C6A 1.385(10) C6 H6A 0.9500 O7 C7 1.215(7) C7 O8 1.334(8) O8 C8 1.455(7) C8 H8A 0.9800 C8 H8B 0.9800 C8 H8C 0.9800 C9 C10 1.505(9) C9 H9A 0.9900 C9 H9B 0.9900 O10 C10 1.231(7) C10 C11 1.494(9) C11 C16 1.398(9) C11 C12 1.407(8) C12 C13 1.392(9) C12 H12A 0.9500 C13 C14 1.379(9) C13 H13A 0.9500 Cl14 C14 1.723(7) C14 C15 1.386(9) C15 C16 1.403(10) C15 H15A 0.9500 C16 H16A 0.9500 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C6A O1 C1 C7 -98.7(6) C6A O1 C1 C2 22.1(6) O1 C1 C2 C2A -21.3(6) C7 C1 C2 C2A 96.6(6) O1 C1 C2 C9 -146.8(5) C7 C1 C2 C9 -28.9(8) C9 C2 C2A C6A 137.6(5) C1 C2 C2A C6A 13.6(6) C9 C2 C2A C3 -44.5(9) C1 C2 C2A C3 -168.6(7) C6A C2A C3 C4 1.4(9) C2 C2A C3 C4 -176.3(6) C2A C3 C4 C5 -0.8(9) C3 C4 C5 C6 0.9(10) C4 C5 C6 C6A -1.5(9) C3 C2A C6A O1 -178.8(5) C2 C2A C6A O1 -0.7(7) C3 C2A C6A C6 -2.2(10) C2 C2A C6A C6 176.0(6) C1 O1 C6A C2A -14.1(7) C1 O1 C6A C6 169.2(6) C5 C6 C6A C2A 2.1(9) C5 C6 C6A O1 178.4(6) O1 C1 C7 O7 24.0(9) C2 C1 C7 O7 -92.0(8) O1 C1 C7 O8 -159.2(5) C2 C1 C7 O8 84.7(7) O7 C7 O8 C8 0.3(9) C1 C7 O8 C8 -176.5(5) C2A C2 C9 C10 169.6(5) C1 C2 C9 C10 -73.7(6) C2 C9 C10 O10 -14.2(8) C2 C9 C10 C11 169.5(5) O10 C10 C11 C16 -17.5(9) C9 C10 C11 C16 158.9(5) O10 C10 C11 C12 163.4(6) C9 C10 C11 C12 -20.2(9) C16 C11 C12 C13 -0.1(10) C10 C11 C12 C13 179.0(6) C11 C12 C13 C14 -1.2(11) C12 C13 C14 C15 -0.6(11) C12 C13 C14 Cl14 -178.6(6) C13 C14 C15 C16 3.7(10) Cl14 C14 C15 C16 -178.3(5) C12 C11 C16 C15 3.2(10) C10 C11 C16 C15 -175.9(6) C14 C15 C16 C11 -5.0(10)