#------------------------------------------------------------------------------ #$Date: 2015-12-20 04:18:32 +0200 (Sun, 20 Dec 2015) $ #$Revision: 171653 $ #$URL: file:///home/coder/svn-repositories/cod/cif/4/11/10/4111000.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_4111000 loop_ _publ_author_name 'Natalie E. Mansfield' 'Joanna Grundy' 'Martyn P. Coles' 'Anthony G. Avent' 'Peter B. Hitchcock' _publ_section_title ; A Conformational Study of Phospha(III)- and Phospha(V)-guanidine Compounds ; _journal_name_full 'Journal of the American Chemical Society' _journal_page_first 13879 _journal_page_last 13893 _journal_paper_doi 10.1021/ja064212t _journal_volume 128 _journal_year 2006 _chemical_compound_source 'synthesis as described' _chemical_formula_moiety 'C25 H33 N2 P S' _chemical_formula_sum 'C25 H33 N2 P S' _chemical_formula_weight 424.56 _chemical_name_common '[Ph2P(S){C(Ncy)(NHcy)}]' _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_Int_Tables_number 14 _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_conform_dict_location ftp://ftp.iucr.org/pub/cif_core.dic _audit_conform_dict_name cif_core.dic _audit_conform_dict_version 2.2 _audit_creation_date 2003-09-16T11:39:47-00:00 _audit_creation_method 'WinGX routine CIF_UPDATE' _cell_angle_alpha 90 _cell_angle_beta 100.495(1) _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 14.3934(2) _cell_length_b 9.6078(2) _cell_length_c 17.3407(3) _cell_measurement_reflns_used 19926 _cell_measurement_temperature 173(2) _cell_measurement_theta_max 25.028 _cell_measurement_theta_min 3.705 _cell_measurement_wavelength 0.71073 _cell_volume 2357.91(7) _computing_cell_refinement 'HKL Scalepack (Otwinowski & Minor 1997)' _computing_data_collection 'Collect (Nonius BV, 1997-2000)' _computing_data_reduction 'HKL Denzo and Scalepack (Otwinowski & Minor 1997)' _computing_molecular_graphics 'Ortep-3 for Windows (Farrugia, 1997)' _computing_publication_material 'WinGX publication routines (Farrugia, 1999)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1997)' _diffrn_ambient_temperature 173(2) _diffrn_detector 'CCD plate' _diffrn_measured_fraction_theta_full 0.987 _diffrn_measured_fraction_theta_max 0.987 _diffrn_measurement_device '95mm CCD camera on \k-goniostat' _diffrn_measurement_device_type KappaCCD _diffrn_measurement_method 'CCD rotation images, thick slices' _diffrn_orient_matrix_type 'by Nonius Collect from scalepack cell' _diffrn_orient_matrix_UB_11 0.394403E-1 _diffrn_orient_matrix_UB_12 -0.793557E-1 _diffrn_orient_matrix_UB_13 0.248378E-1 _diffrn_orient_matrix_UB_21 -0.47304E-1 _diffrn_orient_matrix_UB_22 -0.673292E-1 _diffrn_orient_matrix_UB_23 -0.282098E-1 _diffrn_orient_matrix_UB_31 0.346323E-1 _diffrn_orient_matrix_UB_32 -0.15919E-2 _diffrn_orient_matrix_UB_33 -0.450221E-1 _diffrn_radiation_monochromator graphite _diffrn_radiation_probe x-ray _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0653 _diffrn_reflns_av_unetI/netI 0.0356 _diffrn_reflns_limit_h_max 17 _diffrn_reflns_limit_h_min -16 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -10 _diffrn_reflns_limit_l_max 20 _diffrn_reflns_limit_l_min -19 _diffrn_reflns_number 23714 _diffrn_reflns_theta_full 25.03 _diffrn_reflns_theta_max 25.03 _diffrn_reflns_theta_min 3.93 _diffrn_source 'Enraf Nonius FR590' _exptl_absorpt_coefficient_mu 0.219 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.196 _exptl_crystal_description prism _exptl_crystal_F_000 912 _exptl_crystal_size_max 0.35 _exptl_crystal_size_mid 0.3 _exptl_crystal_size_min 0.25 _refine_diff_density_max 0.292 _refine_diff_density_min -0.267 _refine_diff_density_rms 0.039 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.031 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 266 _refine_ls_number_reflns 4118 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.031 _refine_ls_R_factor_all 0.0435 _refine_ls_R_factor_gt 0.0352 _refine_ls_shift/su_max 0 _refine_ls_shift/su_mean 0 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0288P)^2^+1.3403P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0823 _refine_ls_wR_factor_ref 0.0865 _reflns_number_gt 3539 _reflns_number_total 4118 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file ja064212tsi20060615_042934.cif _[local]_cod_data_source_block sep1203 _cod_database_code 4111000 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags S S 0.44431(3) 0.32344(5) 0.29501(3) 0.03148(13) Uani 1 1 d . P P 0.35926(3) 0.30587(4) 0.19395(2) 0.02108(12) Uani 1 1 d . N1 N 0.27960(11) 0.10797(15) 0.26877(9) 0.0296(3) Uani 1 1 d . H1N H 0.3235(14) 0.147(2) 0.3040(11) 0.032(5) Uiso 1 1 d . N2 N 0.22439(10) 0.09262(14) 0.13599(8) 0.0263(3) Uani 1 1 d . C1 C 0.28955(11) 0.46074(17) 0.16769(9) 0.0235(4) Uani 1 1 d . C2 C 0.33773(12) 0.58687(17) 0.16610(10) 0.0266(4) Uani 1 1 d . H2 H 0.4048 0.5885 0.1781 0.032 Uiso 1 1 calc R C3 C 0.28839(13) 0.70896(18) 0.14712(10) 0.0308(4) Uani 1 1 d . H3 H 0.3215 0.7943 0.1459 0.037 Uiso 1 1 calc R C4 C 0.19074(13) 0.70705(19) 0.12993(12) 0.0376(5) Uani 1 1 d . H4 H 0.1567 0.791 0.1166 0.045 Uiso 1 1 calc R C5 C 0.14264(14) 0.5833(2) 0.13218(13) 0.0442(5) Uani 1 1 d . H5 H 0.0755 0.5825 0.1206 0.053 Uiso 1 1 calc R C6 C 0.19155(12) 0.46006(19) 0.15128(11) 0.0337(4) Uani 1 1 d . H6 H 0.158 0.3753 0.1531 0.04 Uiso 1 1 calc R C7 C 0.42440(11) 0.27271(17) 0.11584(9) 0.0216(3) Uani 1 1 d . C8 C 0.41453(12) 0.35193(17) 0.04770(9) 0.0254(4) Uani 1 1 d . H8 H 0.3711 0.4273 0.0397 0.03 Uiso 1 1 calc R C9 C 0.46861(12) 0.32017(19) -0.00862(10) 0.0311(4) Uani 1 1 d . H9 H 0.4623 0.3744 -0.0551 0.037 Uiso 1 1 calc R C10 C 0.53122(12) 0.2107(2) 0.00245(11) 0.0341(4) Uani 1 1 d . H10 H 0.5676 0.1893 -0.0365 0.041 Uiso 1 1 calc R C11 C 0.54142(12) 0.1316(2) 0.07002(11) 0.0336(4) Uani 1 1 d . H11 H 0.5847 0.056 0.0774 0.04 Uiso 1 1 calc R C12 C 0.48843(12) 0.16280(18) 0.12696(10) 0.0292(4) Uani 1 1 d . H12 H 0.4958 0.1091 0.1737 0.035 Uiso 1 1 calc R C13 C 0.27629(11) 0.15330(16) 0.19399(10) 0.0236(4) Uani 1 1 d . C14 C 0.22993(12) -0.01556(18) 0.28888(10) 0.0285(4) Uani 1 1 d . H14 H 0.2407 -0.0928 0.2529 0.034 Uiso 1 1 calc R C15 C 0.12381(13) 0.0082(2) 0.28009(11) 0.0365(4) Uani 1 1 d . H15A H 0.0971 0.0299 0.2247 0.044 Uiso 1 1 calc R H15B H 0.1119 0.0889 0.3125 0.044 Uiso 1 1 calc R C16 C 0.07500(14) -0.1209(2) 0.30566(13) 0.0464(5) Uani 1 1 d . H16A H 0.0067 -0.1018 0.3016 0.056 Uiso 1 1 calc R H16B H 0.082 -0.1992 0.2701 0.056 Uiso 1 1 calc R C17 C 0.11696(16) -0.1615(2) 0.38933(13) 0.0510(6) Uani 1 1 d . H17A H 0.1045 -0.0869 0.4255 0.061 Uiso 1 1 calc R H17B H 0.0863 -0.2478 0.4034 0.061 Uiso 1 1 calc R C18 C 0.22268(16) -0.1848(2) 0.39860(15) 0.0539(6) Uani 1 1 d . H18A H 0.2347 -0.2664 0.367 0.065 Uiso 1 1 calc R H18B H 0.249 -0.2052 0.4543 0.065 Uiso 1 1 calc R C19 C 0.27246(14) -0.0576(2) 0.37243(12) 0.0414(5) Uani 1 1 d . H19A H 0.2672 0.0211 0.4082 0.05 Uiso 1 1 calc R H19B H 0.3404 -0.0787 0.3757 0.05 Uiso 1 1 calc R C20 C 0.20940(11) 0.14525(17) 0.05572(9) 0.0235(4) Uani 1 1 d . H20 H 0.2357 0.2415 0.0554 0.028 Uiso 1 1 calc R C21 C 0.10293(12) 0.1485(2) 0.02534(11) 0.0350(4) Uani 1 1 d . H21A H 0.0765 0.0545 0.0304 0.042 Uiso 1 1 calc R H21B H 0.073 0.2131 0.058 0.042 Uiso 1 1 calc R C22 C 0.07906(14) 0.1946(2) -0.05997(12) 0.0448(5) Uani 1 1 d . H22A H 0.0098 0.1897 -0.0781 0.054 Uiso 1 1 calc R H22B H 0.0989 0.2926 -0.0642 0.054 Uiso 1 1 calc R C23 C 0.12795(15) 0.1038(2) -0.11217(11) 0.0446(5) Uani 1 1 d . H23A H 0.1016 0.0084 -0.1138 0.054 Uiso 1 1 calc R H23B H 0.1157 0.1414 -0.1662 0.054 Uiso 1 1 calc R C24 C 0.23369(13) 0.0983(2) -0.08211(10) 0.0360(4) Uani 1 1 d . H24A H 0.2611 0.1918 -0.0867 0.043 Uiso 1 1 calc R H24B H 0.263 0.0334 -0.115 0.043 Uiso 1 1 calc R C25 C 0.25646(12) 0.05085(18) 0.00318(10) 0.0282(4) Uani 1 1 d . H25A H 0.3258 0.0521 0.0214 0.034 Uiso 1 1 calc R H25B H 0.2342 -0.0459 0.0071 0.034 Uiso 1 1 calc R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 S 0.0365(3) 0.0303(3) 0.0265(2) -0.00183(18) 0.00253(19) -0.00186(19) P 0.0236(2) 0.0176(2) 0.0227(2) 0.00001(16) 0.00594(17) 0.00040(17) N1 0.0392(9) 0.0252(8) 0.0242(8) 0.0012(6) 0.0049(7) -0.0099(7) N2 0.0300(8) 0.0235(7) 0.0257(8) 0.0004(6) 0.0064(6) -0.0025(6) C1 0.0256(8) 0.0202(8) 0.0260(9) -0.0013(7) 0.0084(7) 0.0025(7) C2 0.0257(9) 0.0244(9) 0.0306(9) -0.0016(7) 0.0078(7) 0.0003(7) C3 0.0383(10) 0.0196(9) 0.0373(10) -0.0011(7) 0.0143(8) -0.0009(8) C4 0.0366(10) 0.0251(10) 0.0515(12) 0.0034(9) 0.0092(9) 0.0107(8) C5 0.0259(10) 0.0315(11) 0.0754(15) -0.0001(10) 0.0096(10) 0.0059(8) C6 0.0262(9) 0.0231(9) 0.0535(12) -0.0019(8) 0.0116(8) 0.0000(7) C7 0.0202(8) 0.0209(8) 0.0238(8) -0.0016(7) 0.0044(7) -0.0018(7) C8 0.0274(9) 0.0217(9) 0.0269(9) 0.0000(7) 0.0047(7) 0.0017(7) C9 0.0362(10) 0.0321(10) 0.0268(9) 0.0000(8) 0.0104(8) -0.0037(8) C10 0.0299(10) 0.0426(11) 0.0329(10) -0.0079(8) 0.0143(8) -0.0013(8) C11 0.0289(9) 0.0357(10) 0.0364(10) -0.0044(8) 0.0066(8) 0.0113(8) C12 0.0294(9) 0.0296(10) 0.0285(9) 0.0014(7) 0.0048(7) 0.0068(7) C13 0.0270(9) 0.0178(8) 0.0271(9) 0.0006(7) 0.0080(7) 0.0014(7) C14 0.0343(10) 0.0224(9) 0.0304(9) 0.0001(7) 0.0104(8) -0.0046(7) C15 0.0366(10) 0.0401(11) 0.0343(10) 0.0009(9) 0.0102(8) -0.0001(9) C16 0.0383(11) 0.0514(13) 0.0539(13) -0.0048(10) 0.0201(10) -0.0101(10) C17 0.0549(14) 0.0471(13) 0.0576(14) 0.0119(11) 0.0276(11) -0.0096(11) C18 0.0527(13) 0.0458(13) 0.0650(15) 0.0282(11) 0.0157(11) -0.0047(11) C19 0.0422(11) 0.0399(12) 0.0416(11) 0.0160(9) 0.0060(9) -0.0055(9) C20 0.0230(8) 0.0208(8) 0.0264(9) 0.0006(7) 0.0041(7) -0.0016(7) C21 0.0238(9) 0.0360(11) 0.0446(11) 0.0018(9) 0.0049(8) -0.0002(8) C22 0.0291(10) 0.0482(13) 0.0513(13) 0.0110(10) -0.0080(9) 0.0039(9) C23 0.0500(12) 0.0451(12) 0.0320(11) 0.0039(9) -0.0105(9) -0.0011(10) C24 0.0416(11) 0.0397(11) 0.0259(10) -0.0020(8) 0.0037(8) 0.0016(9) C25 0.0291(9) 0.0264(9) 0.0275(9) -0.0022(7) 0.0011(7) 0.0033(7) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0 0 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' P P 0.1023 0.0942 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C1 P C7 107.22(7) C1 P C13 108.47(7) C7 P C13 106.09(7) C1 P S 112.55(6) C7 P S 111.17(6) C13 P S 111.05(6) C13 N1 C14 123.65(15) C13 N2 C20 123.76(14) C6 C1 C2 119.29(15) C6 C1 P 123.04(13) C2 C1 P 117.65(12) C3 C2 C1 120.38(16) C2 C3 C4 119.93(16) C5 C4 C3 120.05(17) C4 C5 C6 120.47(17) C5 C6 C1 119.87(17) C8 C7 C12 119.70(15) C8 C7 P 123.55(12) C12 C7 P 116.74(12) C9 C8 C7 119.57(16) C10 C9 C8 120.43(16) C9 C10 C11 120.30(15) C10 C11 C12 119.88(16) C11 C12 C7 120.12(16) N2 C13 N1 121.18(15) N2 C13 P 129.16(12) N1 C13 P 109.64(12) N1 C14 C19 108.28(15) N1 C14 C15 112.30(15) C19 C14 C15 110.93(14) C14 C15 C16 110.73(16) C17 C16 C15 111.21(17) C18 C17 C16 110.85(17) C17 C18 C19 111.49(18) C14 C19 C18 111.49(17) N2 C20 C21 107.50(13) N2 C20 C25 111.00(13) C21 C20 C25 109.41(14) C22 C21 C20 112.07(15) C23 C22 C21 111.40(16) C24 C23 C22 111.07(16) C23 C24 C25 111.62(15) C24 C25 C20 111.12(14) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance S P 1.9536(6) P C1 1.8061(16) P C7 1.8103(15) P C13 1.8909(16) N1 C13 1.361(2) N1 C14 1.460(2) N2 C13 1.279(2) N2 C20 1.460(2) C1 C6 1.387(2) C1 C2 1.399(2) C2 C3 1.380(2) C3 C4 1.383(3) C4 C5 1.380(3) C5 C6 1.386(3) C7 C8 1.391(2) C7 C12 1.392(2) C8 C9 1.389(2) C9 C10 1.376(3) C10 C11 1.381(3) C11 C12 1.386(2) C14 C19 1.521(3) C14 C15 1.524(2) C15 C16 1.530(3) C16 C17 1.518(3) C17 C18 1.517(3) C18 C19 1.527(3) C20 C21 1.527(2) C20 C25 1.529(2) C21 C22 1.522(3) C22 C23 1.519(3) C23 C24 1.517(3) C24 C25 1.525(2)