#------------------------------------------------------------------------------ #$Date: 2014-07-12 00:06:05 +0300 (Sat, 12 Jul 2014) $ #$Revision: 120077 $ #$URL: file:///home/coder/svn-repositories/cod/cif/4/11/28/4112806.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_4112806 loop_ _publ_author_name 'Michael T. Kirchner' 'Roland Boese' 'W. Edward Billups' 'Lewis R. Norman' _publ_section_title ; Gas Hydrate Single-Crystal Structure Analyses ; _journal_name_full 'Journal of the American Chemical Society' _journal_page_first 9407 _journal_page_last 9412 _journal_volume 126 _journal_year 2004 _chemical_formula_moiety '4.5(C H4) (C10 H16) 34(H2 O)' _chemical_formula_sum 'C14.5 H102 O34' _chemical_formula_weight 828.98 _chemical_name_systematic ; clathrate hydrate of adamantane and methane ; _space_group_IT_number 191 _symmetry_cell_setting hexagonal _symmetry_space_group_name_Hall '-P 6 2' _symmetry_space_group_name_H-M 'P 6/m m m' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 120.00 _cell_formula_units_Z 1 _cell_length_a 12.3304(17) _cell_length_b 12.3304(17) _cell_length_c 9.9206(16) _cell_measurement_reflns_used 1474 _cell_measurement_temperature 123(2) _cell_measurement_theta_max 27.459 _cell_measurement_theta_min 2.802 _cell_volume 1306.2(3) _computing_cell_refinement 'Bruker SMART' _computing_data_collection 'Bruker SMART' _computing_data_reduction 'Bruker SAINT' _computing_molecular_graphics 'Bruker SHELXTL' _computing_publication_material 'Bruker SHELXTL' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 123(2) _diffrn_detector_area_resol_mean 512 _diffrn_measured_fraction_theta_full 0.838 _diffrn_measured_fraction_theta_max 0.838 _diffrn_measurement_device_type 'CCD area detector' _diffrn_measurement_method 'phi and omega scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0545 _diffrn_reflns_av_sigmaI/netI 0.0287 _diffrn_reflns_limit_h_max 16 _diffrn_reflns_limit_h_min -9 _diffrn_reflns_limit_k_max 15 _diffrn_reflns_limit_k_min -16 _diffrn_reflns_limit_l_max 9 _diffrn_reflns_limit_l_min -8 _diffrn_reflns_number 5463 _diffrn_reflns_theta_full 28.26 _diffrn_reflns_theta_max 28.26 _diffrn_reflns_theta_min 1.91 _exptl_absorpt_coefficient_mu 0.103 _exptl_absorpt_correction_T_max 1.00 _exptl_absorpt_correction_T_min 0.86 _exptl_absorpt_correction_type empirical _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.054 _exptl_crystal_density_meas 0 _exptl_crystal_description oligocrystalline _exptl_crystal_F_000 466 _exptl_crystal_size_max 0.3 _refine_diff_density_max 0.246 _refine_diff_density_min -0.363 _refine_diff_density_rms 0.054 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.110 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 65 _refine_ls_number_reflns 585 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.110 _refine_ls_R_factor_all 0.0641 _refine_ls_R_factor_gt 0.0438 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0531P)^2^+0.2990P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0949 _refine_ls_wR_factor_ref 0.1121 _reflns_number_gt 430 _reflns_number_total 585 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file ja049247csi20040211_052014.cif _[local]_cod_data_source_block mahxmk4m _cod_database_code 4112806 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-y, x-y, z' '-x+y, -x, z' '-x, -y, z' 'y, -x+y, z' 'x-y, x, z' 'y, x, -z' 'x-y, -y, -z' '-x, -x+y, -z' '-y, -x, -z' '-x+y, y, -z' 'x, x-y, -z' '-x, -y, -z' 'y, -x+y, -z' 'x-y, x, -z' 'x, y, -z' '-y, x-y, -z' '-x+y, -x, -z' '-y, -x, z' '-x+y, y, z' 'x, x-y, z' 'y, x, z' 'x-y, -y, z' '-x, -x+y, z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags O1 O 0.3333 0.6667 0.1382(3) 0.0280(7) Uani 1 6 d S H1 H 0.3333 0.6667 0.063(9) 0.042 Uiso 0.50 6 d SP H2 H 0.299(2) 0.597(4) 0.159(5) 0.042 Uiso 0.50 2 d SP O2 O 0.13016(10) 0.2603(2) 0.0000 0.0281(6) Uani 1 4 d S H3 H 0.059(5) 0.223(4) 0.0000 0.042 Uiso 0.50 2 d SP H4 H 0.153(3) 0.307(5) 0.063(6) 0.042 Uiso 0.50 2 d SP O3 O 0.0000 0.38760(12) 0.35997(19) 0.0272(5) Uani 1 2 d S H5 H 0.0000 0.452(4) 0.359(5) 0.041 Uiso 0.50 2 d SP H6 H 0.058(4) 0.394(3) 0.333(4) 0.041 Uiso 0.50 1 d P H7 H 0.0000 0.381(4) 0.446(5) 0.041 Uiso 0.50 2 d SP O4 O 0.20945(7) 0.41890(13) 0.22274(19) 0.0279(5) Uani 1 2 d S H8 H 0.243(3) 0.486(5) 0.204(5) 0.042 Uiso 0.50 2 d SP H9 H 0.148(4) 0.406(3) 0.268(4) 0.042 Uiso 0.50 1 d P H10 H 0.188(3) 0.376(5) 0.161(7) 0.042 Uiso 0.50 2 d SP C1 C 0.5000 0.5000 0.0000 0.045(2) Uani 0.92(2) 8 d SP H11 H 0.5198 0.5739 0.0582 0.068 Uiso 0.35(3) 1 d P C2 C 0.3333 0.6667 0.5000 0.058(3) Uani 0.872(17) 12 d SP H12 H 0.4006 0.7338 0.5564 0.086 Uiso 0.291(6) 1 d P C3 C 0.0714(3) 0.1429(5) 0.5000 0.083(6) Uani 0.84(3) 4 d SP H13 H 0.1165 0.2331 0.5000 0.125 Uiso 0.84(3) 4 d SP C4 C 0.0000 0.0000 0.301(3) 0.092(10) Uani 0.48(3) 12 d SP C5 C 0.0619(5) 0.1237(10) 0.362(2) 0.122(6) Uani 0.451(18) 2 d SP loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O1 0.0263(7) 0.0263(7) 0.031(2) 0.000 0.000 0.0131(4) O2 0.0255(7) 0.0271(11) 0.0322(18) 0.000 0.000 0.0135(5) O3 0.0261(7) 0.0259(5) 0.0298(12) -0.0018(6) 0.000 0.0130(3) O4 0.0258(5) 0.0266(7) 0.0316(13) 0.0001(6) 0.0001(3) 0.0133(4) C1 0.049(3) 0.049(3) 0.042(5) 0.000 0.000 0.027(3) C2 0.063(3) 0.063(3) 0.046(7) 0.000 0.000 0.0317(17) C3 0.048(2) 0.041(3) 0.158(16) 0.000 0.000 0.0204(13) C4 0.060(7) 0.060(7) 0.16(2) 0.000 0.000 0.030(4) C5 0.115(6) 0.084(7) 0.157(17) -0.037(8) -0.018(4) 0.042(3) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle H1 O1 H2 106(4) H3 O2 H4 109(3) H5 O3 H6 112(3) H5 O3 H7 97(5) H6 O3 H7 109(3) H8 O4 H9 107(3) H8 O4 H10 112(6) H9 O4 H10 110(3) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance O1 H1 0.75(9) O1 H2 0.77(5) O2 H3 0.76(5) O2 H4 0.80(6) O3 H5 0.80(5) O3 H6 0.73(4) O3 H7 0.86(5) O4 H8 0.74(6) O4 H9 0.83(4) O4 H10 0.76(7) C1 H11 1.00003(10) C2 H12 1.00000(10) C3 H13 0.964(6) _journal_paper_doi 10.1021/ja049247c