#------------------------------------------------------------------------------ #$Date: 2015-04-02 14:22:18 +0300 (Thu, 02 Apr 2015) $ #$Revision: 134621 $ #$URL: file:///home/coder/svn-repositories/cod/cif/4/11/64/4116406.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_4116406 loop_ _publ_author_name 'M. V. Alfimov' 'S. P. Gromov' 'Yu. V. Fedorov' 'O. A. Fedorova' 'A. I. Vedernikov' 'A. V. Churakov' 'L. G. Kuz'mina' 'J. A. K. Howard' 'S. Bossmann' 'A. Braun' 'M. Woerner' 'D. F. Sears' 'J. Saltiel' _publ_section_title ; Synthesis, Structure, and Ion Selective Complexation of Trans and Cis Isomers of Photochromic Dithia-18-crown-6 Ethers ; _journal_name_full 'Journal of the American Chemical Society' _journal_page_first 4992 _journal_page_last 5000 _journal_paper_doi 10.1021/ja990370r _journal_volume 121 _journal_year 1999 _chemical_formula_sum 'C26 H32 I N O4 S3' _chemical_formula_weight 645.61 _chemical_name_systematic ; ? ; _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL _cell_angle_alpha 64.01(6) _cell_angle_beta 85.28(9) _cell_angle_gamma 71.29(9) _cell_formula_units_Z 2 _cell_length_a 9.711(13) _cell_length_b 12.304(9) _cell_length_c 13.715(9) _cell_measurement_reflns_used 25 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 13 _cell_measurement_theta_min 11 _cell_volume 1392(3) _computing_structure_refinement 'SHELXL-93 (Sheldrick, 1993)' _computing_structure_solution 'SHELXS-86 (Sheldrick, 1990)' _diffrn_ambient_temperature 293(2) _diffrn_measurement_device 'Enraf-Nonius CAD4' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0311 _diffrn_reflns_av_sigmaI/netI 0.0265 _diffrn_reflns_limit_h_max 8 _diffrn_reflns_limit_h_min -11 _diffrn_reflns_limit_k_max 15 _diffrn_reflns_limit_k_min -14 _diffrn_reflns_limit_l_max 16 _diffrn_reflns_limit_l_min -3 _diffrn_reflns_number 5015 _diffrn_reflns_theta_max 25.97 _diffrn_reflns_theta_min 2.22 _diffrn_standards_decay_% 0 _diffrn_standards_interval_time 120 _diffrn_standards_number 2 _exptl_absorpt_coefficient_mu 1.407 _exptl_absorpt_correction_type none _exptl_crystal_colour red _exptl_crystal_density_diffrn 1.540 _exptl_crystal_description block _exptl_crystal_F_000 656 _exptl_crystal_size_max 0.5 _exptl_crystal_size_mid 0.2 _exptl_crystal_size_min 0.2 _refine_diff_density_max 1.745 _refine_diff_density_min -0.857 _refine_diff_density_rms 0.147 _refine_ls_extinction_coef 0.0000(17) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXL _refine_ls_goodness_of_fit_all 1.075 _refine_ls_goodness_of_fit_obs 1.106 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 312 _refine_ls_number_reflns 4612 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.105 _refine_ls_restrained_S_obs 1.106 _refine_ls_R_factor_all 0.0787 _refine_ls_R_factor_obs 0.0560 _refine_ls_shift/esd_max -3.258 _refine_ls_shift/esd_mean 0.011 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w=1/[\s^2^(Fo^2^)+(0.1430P)^2^+0.6437P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_all 0.1986 _refine_ls_wR_factor_obs 0.1779 _reflns_number_observed 3728 _reflns_number_total 4613 _reflns_observed_criterion I>2\s(I) _[local]_cod_data_source_file ja990370r.cif _[local]_cod_data_source_block a _cod_depositor_comments ; The following automatic conversions were performed: '_refine_ls_weighting_scheme' value 'calc w=1/[\s^2^(Fo^2^)+(0.1430P)^2^+0.6437P] where P=(Fo^2^+2Fc^2^)/3' was changed to 'calc'. New tag '_refine_ls_weighting_details' was created. The value of the new tag was set to 'w=1/[\s^2^(Fo^2^)+(0.1430P)^2^+0.6437P] where P=(Fo^2^+2Fc^2^)/3'. Automatic conversion script Id: cif_fix_values 3143 2015-03-26 13:38:13Z robertas ; _cod_original_cell_volume 1391.9(23) _cod_database_code 4116406 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 I 0.0648(4) 0.0550(3) 0.0644(3) -0.0345(2) 0.0218(2) -0.0287(2) S2 0.0742(14) 0.113(2) 0.099(2) -0.079(2) 0.0316(12) -0.0501(13) S3 0.0596(11) 0.0479(9) 0.0747(11) -0.0384(9) 0.0268(9) -0.0265(8) O1 0.072(3) 0.069(3) 0.067(3) -0.048(3) 0.035(3) -0.038(3) O2 0.087(4) 0.092(4) 0.093(4) -0.064(4) 0.049(3) -0.043(3) O3 0.055(3) 0.101(4) 0.076(4) -0.050(3) 0.013(3) -0.022(3) O4 0.075(3) 0.063(3) 0.070(3) -0.046(3) 0.040(3) -0.043(3) N 0.045(3) 0.044(3) 0.055(3) -0.029(2) 0.007(2) -0.018(2) C1 0.065(5) 0.074(5) 0.062(4) -0.043(4) 0.024(4) -0.035(4) C2 0.078(5) 0.091(6) 0.070(5) -0.055(4) 0.042(4) -0.051(5) C4 0.077(6) 0.072(5) 0.082(6) -0.046(5) 0.029(5) -0.018(4) C5 0.076(6) 0.078(5) 0.079(5) -0.053(5) 0.024(4) -0.030(4) C6 0.083(6) 0.090(6) 0.092(6) -0.060(5) 0.014(5) -0.038(5) C7 0.075(6) 0.084(6) 0.076(6) -0.036(5) 0.011(5) -0.024(5) C8 0.101(7) 0.076(5) 0.059(4) -0.039(4) 0.019(4) -0.035(5) C9 0.103(6) 0.064(4) 0.063(4) -0.039(4) 0.033(4) -0.052(4) C10 0.080(5) 0.069(5) 0.065(4) -0.044(4) 0.035(4) -0.048(4) C11 0.047(4) 0.058(4) 0.050(4) -0.031(3) 0.012(3) -0.020(3) C12 0.052(4) 0.043(3) 0.050(3) -0.030(3) 0.012(3) -0.018(3) C13 0.048(4) 0.049(3) 0.054(4) -0.031(3) 0.012(3) -0.020(3) C14 0.046(4) 0.041(3) 0.042(3) -0.022(3) 0.000(3) -0.011(3) C15 0.054(4) 0.047(3) 0.067(4) -0.035(3) 0.012(3) -0.022(3) C16 0.064(4) 0.057(4) 0.060(4) -0.030(3) 0.024(3) -0.032(3) C17 0.046(4) 0.049(3) 0.064(4) -0.037(3) 0.007(3) -0.016(3) C18 0.053(4) 0.045(3) 0.056(4) -0.035(3) 0.007(3) -0.012(3) C19 0.044(3) 0.037(3) 0.049(3) -0.023(3) 0.004(3) -0.012(2) C20 0.057(4) 0.044(3) 0.083(5) -0.026(4) 0.012(4) -0.024(3) C21 0.045(4) 0.041(3) 0.053(4) -0.026(3) 0.007(3) -0.009(3) C22 0.054(4) 0.064(4) 0.065(4) -0.038(4) 0.022(3) -0.018(3) C23 0.061(5) 0.103(7) 0.088(6) -0.065(6) 0.031(4) -0.034(5) C24 0.070(5) 0.078(5) 0.104(6) -0.073(5) 0.013(5) -0.017(4) C25 0.059(5) 0.062(4) 0.108(6) -0.064(5) 0.014(4) -0.021(4) C26 0.043(4) 0.046(3) 0.069(4) -0.036(3) 0.010(3) -0.014(3) loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_occupancy _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_group I I 0.26323(5) 0.25267(4) 0.07496(4) 0.0568(2) Uani 1 d . . S1A S 0.9469(5) 0.4146(5) 0.3591(4) 0.0640(10) Uiso 0.50 d P 1 S1B S 0.9879(5) 0.3602(4) 0.3942(4) 0.0565(9) Uiso 0.50 d P 2 S2 S 0.3570(3) 0.1525(3) 0.6743(2) 0.0796(7) Uani 1 d . . S3 S 0.3104(2) 0.8341(2) 0.9588(2) 0.0552(5) Uani 1 d . . O1 O 0.6810(6) 0.3985(5) 0.5963(4) 0.0603(13) Uani 1 d . . O2 O 0.8409(7) 0.1868(6) 0.3561(5) 0.081(2) Uani 1 d . . O3 O 0.7455(6) 0.0459(6) 0.5539(5) 0.075(2) Uani 1 d . . O4 O 0.5101(6) 0.3071(5) 0.7366(4) 0.0595(13) Uani 1 d . . N N 0.1694(6) 0.6799(5) 1.0586(4) 0.0445(12) Uani 1 d . . C1 C 0.7809(9) 0.4417(8) 0.5178(6) 0.060(2) Uani 1 d . . H1A H 0.8667(9) 0.4371(8) 0.5529(6) 0.071 Uiso 1 calc R . H1B H 0.7356(9) 0.5291(8) 0.4650(6) 0.071 Uiso 1 calc R . C2 C 0.8207(10) 0.3539(9) 0.4641(7) 0.068(2) Uani 1 d . . H2C H 0.7347(10) 0.3566(9) 0.4307(7) 0.082 Uiso 0.50 calc PR 1 H2D H 0.8688(10) 0.2668(9) 0.5164(7) 0.082 Uiso 0.50 calc PR 1 H2A H 0.8332(10) 0.2681(9) 0.5177(7) 0.082 Uiso 0.50 d PR 2 H2B H 0.7427(10) 0.3780(9) 0.4126(7) 0.082 Uiso 0.50 d PR 2 C3 C 0.9443(14) 0.3419(12) 0.2723(10) 0.102(3) Uiso 1 d . . H3C H 0.8533(14) 0.3929(12) 0.2281(10) 0.123 Uiso 0.50 calc PR 1 H3D H 1.0204(14) 0.3607(12) 0.2234(10) 0.123 Uiso 0.50 calc PR 1 H3A H 1.0085(14) 0.3708(12) 0.2168(10) 0.123 Uiso 0.50 d PR 2 H3B H 0.8463(14) 0.3950(12) 0.2441(10) 0.123 Uiso 0.50 d PR 2 C4 C 0.9569(10) 0.2146(8) 0.2955(8) 0.075(2) Uani 1 d . . H4A H 0.9535(10) 0.2065(8) 0.2286(8) 0.091 Uiso 1 calc R . H4B H 1.0486(10) 0.1564(8) 0.3364(8) 0.091 Uiso 1 calc R . C5 C 0.8424(10) 0.0619(8) 0.3868(7) 0.070(2) Uani 1 d . . H5A H 0.9345(10) 0.0017(8) 0.4258(7) 0.084 Uiso 1 calc R . H5B H 0.8306(10) 0.0500(8) 0.3229(7) 0.084 Uiso 1 calc R . C6 C 0.7206(11) 0.0405(10) 0.4574(8) 0.079(2) Uani 1 d . . H6A H 0.6298(11) 0.1052(10) 0.4199(8) 0.094 Uiso 1 calc R . H6B H 0.7125(11) -0.0422(10) 0.4738(8) 0.094 Uiso 1 calc R . C7 C 0.6277(11) 0.0350(9) 0.6242(8) 0.079(2) Uani 1 d . . H7A H 0.6655(11) -0.0015(9) 0.6990(8) 0.095 Uiso 1 calc R . H7B H 0.5833(11) -0.0220(9) 0.6178(8) 0.095 Uiso 1 calc R . C8 C 0.5174(11) 0.1591(9) 0.5970(7) 0.074(2) Uani 1 d . . H8A H 0.4873(11) 0.1985(9) 0.5202(7) 0.089 Uiso 1 calc R . H8B H 0.5610(11) 0.2133(9) 0.6090(7) 0.089 Uiso 1 calc R . C9 C 0.4135(11) 0.1353(8) 0.8012(6) 0.067(2) Uani 1 d . . H9A H 0.3537(11) 0.0941(8) 0.8559(6) 0.081 Uiso 1 calc R . H9B H 0.5132(11) 0.0786(8) 0.8202(6) 0.081 Uiso 1 calc R . C10 C 0.4064(10) 0.2565(7) 0.8072(6) 0.061(2) Uani 1 d . . H10A H 0.3092(10) 0.3174(7) 0.7842(6) 0.074 Uiso 1 calc R . H10B H 0.4297(10) 0.2387(7) 0.8812(6) 0.074 Uiso 1 calc R . C11 C 0.6257(7) 0.4622(7) 0.6580(5) 0.0482(15) Uani 1 d . . C12 C 0.5302(7) 0.4113(6) 0.7355(5) 0.0446(14) Uani 1 d . . C13 C 0.4651(7) 0.4708(6) 0.7998(6) 0.0464(14) Uani 1 d . . H13A H 0.4010(7) 0.4388(6) 0.8499(6) 0.056 Uiso 1 calc R . C14 C 0.4946(7) 0.5802(6) 0.7904(5) 0.0422(13) Uani 1 d . . C15 C 0.5902(8) 0.6257(6) 0.7167(6) 0.051(2) Uani 1 d . . H15A H 0.6114(8) 0.6967(6) 0.7112(6) 0.061 Uiso 1 calc R . C16 C 0.6565(9) 0.5672(7) 0.6493(6) 0.056(2) Uani 1 d . . H16A H 0.7207(9) 0.5994(7) 0.5994(6) 0.067 Uiso 1 calc R . C17 C 0.4254(7) 0.6479(6) 0.8536(6) 0.049(2) Uani 1 d . . H17A H 0.4530(7) 0.7182(6) 0.8418(6) 0.058 Uiso 1 calc R . C18 C 0.3258(7) 0.6226(6) 0.9278(5) 0.0475(15) Uani 1 d . . H18A H 0.2955(7) 0.5526(6) 0.9434(5) 0.057 Uiso 1 calc R . C19 C 0.2654(7) 0.7011(5) 0.9834(5) 0.0418(13) Uani 1 d . . C20 C 0.1097(9) 0.5742(7) 1.0934(7) 0.060(2) Uani 1 d . . H20A H 0.1801(23) 0.5036(18) 1.0856(38) 0.072 Uiso 1 calc R . H20B H 0.0224(31) 0.6013(16) 1.0492(27) 0.072 Uiso 1 calc R . H20C H 0.0874(50) 0.5484(31) 1.1682(13) 0.072 Uiso 1 calc R . C21 C 0.1290(7) 0.7669(6) 1.1011(5) 0.0457(14) Uani 1 d . . C22 C 0.0325(8) 0.7659(7) 1.1845(6) 0.059(2) Uani 1 d . . H22A H -0.0143(8) 0.7045(7) 1.2155(6) 0.070 Uiso 1 calc R . C23 C 0.0115(9) 0.8614(9) 1.2173(8) 0.075(2) Uani 1 d . . H23A H -0.0499(9) 0.8630(9) 1.2727(8) 0.090 Uiso 1 calc R . C24 C 0.0796(10) 0.9557(8) 1.1701(8) 0.073(2) Uani 1 d . . H24A H 0.0616(10) 1.0189(8) 1.1937(8) 0.088 Uiso 1 calc R . C25 C 0.1719(9) 0.9554(7) 1.0896(8) 0.066(2) Uani 1 d . . H25A H 0.2171(9) 1.0178(7) 1.0574(8) 0.079 Uiso 1 calc R . C26 C 0.1960(7) 0.8594(6) 1.0578(6) 0.049(2) Uani 1 d . . loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' I I -0.4742 1.8119 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C3 S1A C2 102.5(5) C2 S1B C3 100.4(5) C9 S2 C8 103.8(4) C19 S3 C26 90.7(3) C11 O1 C1 118.2(5) C4 O2 C5 112.8(6) C6 O3 C7 113.5(7) C12 O4 C10 117.7(5) C19 N C21 113.9(5) C19 N C20 123.8(5) C21 N C20 122.3(5) O1 C1 C2 105.4(6) C1 C2 S1B 111.4(6) C1 C2 S1A 104.9(5) C4 C3 S1A 131.5(9) C4 C3 S1B 113.4(9) O2 C4 C3 107.0(8) O2 C5 C6 107.8(7) O3 C6 C5 109.7(8) O3 C7 C8 111.4(8) C7 C8 S2 114.3(7) C10 C9 S2 116.2(6) O4 C10 C9 107.5(6) O1 C11 C16 124.9(6) O1 C11 C12 114.6(6) C16 C11 C12 120.5(6) O4 C12 C13 126.0(6) O4 C12 C11 114.7(5) C13 C12 C11 119.2(6) C12 C13 C14 120.7(6) C15 C14 C13 119.0(6) C15 C14 C17 118.4(6) C13 C14 C17 122.6(6) C14 C15 C16 121.2(6) C11 C16 C15 119.4(6) C18 C17 C14 128.4(6) C17 C18 C19 121.7(6) N C19 C18 124.5(6) N C19 S3 112.4(4) C18 C19 S3 123.1(5) N C21 C26 113.8(6) N C21 C22 126.4(6) C26 C21 C22 119.8(6) C23 C22 C21 116.3(7) C22 C23 C24 122.5(7) C25 C24 C23 120.4(7) C24 C25 C26 117.8(7) C21 C26 C25 123.2(7) C21 C26 S3 109.2(5) C25 C26 S3 127.6(6) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance S1A C3 1.780(13) S1A C2 1.868(9) S1B C2 1.823(9) S1B C3 1.881(13) S2 C9 1.771(9) S2 C8 1.814(10) S3 C19 1.712(6) S3 C26 1.753(7) O1 C11 1.362(8) O1 C1 1.428(9) O2 C4 1.386(11) O2 C5 1.399(10) O3 C6 1.398(11) O3 C7 1.435(11) O4 C12 1.351(7) O4 C10 1.432(8) N C19 1.328(8) N C21 1.371(8) N C20 1.466(8) C1 C2 1.497(10) C3 C4 1.420(14) C5 C6 1.482(13) C7 C8 1.462(13) C9 C10 1.507(9) C11 C16 1.372(10) C11 C12 1.417(9) C12 C13 1.375(8) C13 C14 1.413(9) C14 C15 1.372(9) C14 C17 1.441(8) C15 C16 1.405(10) C17 C18 1.350(10) C18 C19 1.438(8) C21 C26 1.375(9) C21 C22 1.416(9) C22 C23 1.385(11) C23 C24 1.402(13) C24 C25 1.364(12) C25 C26 1.378(9)