#------------------------------------------------------------------------------ #$Date: 2011-01-03 14:48:23 +0200 (Mon, 03 Jan 2011) $ #$Revision: 5312 $ #$URL: file:///home/coder/svn-repositories/cod/cif/4/4302553.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_4302553 loop_ _publ_author_name 'Franz A. Mautner' 'Lars \"Ohrstr\"om' 'Beate Sodin' 'Ramon Vicente' _publ_section_title ; New Topology in Azide-Bridged Cobalt(II) Complexes: the Weak Ferromagnet [Co2(N3)4(Hexamethylenetetramine)(H2O)]n ; _journal_name_full 'Inorganic Chemistry' _journal_page_first 6280 _journal_page_last 6286 _journal_volume 48 _journal_year 2009 _chemical_formula_moiety 'C6 H14 Co2 N16 O' _chemical_formula_sum 'C6 H14 Co2 N16 O' _chemical_formula_weight 444.19 _chemical_name_common '[Co2(N3)4(hmt)(H2O)]n' _chemical_name_systematic ; ? ; _space_group_IT_number 12 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-C 2y' _symmetry_space_group_name_H-M 'C 1 2/m 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL _cell_angle_alpha 90.00 _cell_angle_beta 90.03(3) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 11.708(2) _cell_length_b 12.641(3) _cell_length_c 9.482(2) _cell_measurement_reflns_used 400 _cell_measurement_temperature 100(2) _cell_measurement_theta_max 25.00 _cell_measurement_theta_min 3.00 _cell_volume 1403.3(5) _computing_cell_refinement 'Bruker SAINT (1998)' _computing_data_collection 'Bruker SMART (1998)' _computing_data_reduction 'Bruker SHELXTL' _computing_molecular_graphics 'SHELXTL/PC v.5.03 (Siemens Ind. Aut.)' _computing_publication_material 'SHELXTL/PC v.5.03 (Siemens Ind. Aut.)' _computing_structure_refinement 'SHELXL-93 (Sheldrick, 1993)' _computing_structure_solution 'SHELXS-86 (Sheldrick, 1990)' _diffrn_ambient_temperature 100(2) _diffrn_measured_fraction_theta_full 0.99 _diffrn_measured_fraction_theta_max 0.99 _diffrn_measurement_device 'Bruker P4' _diffrn_measurement_method \w-scans _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0460 _diffrn_reflns_av_sigmaI/netI 0.0411 _diffrn_reflns_limit_h_max 14 _diffrn_reflns_limit_h_min -14 _diffrn_reflns_limit_k_max 15 _diffrn_reflns_limit_k_min -15 _diffrn_reflns_limit_l_max 11 _diffrn_reflns_limit_l_min -11 _diffrn_reflns_number 5579 _diffrn_reflns_theta_full 26.31 _diffrn_reflns_theta_max 26.31 _diffrn_reflns_theta_min 2.15 _exptl_absorpt_coefficient_mu 2.407 _exptl_absorpt_correction_T_max 0.748 _exptl_absorpt_correction_T_min 0.572 _exptl_absorpt_correction_type empirical _exptl_absorpt_process_details SADABS _exptl_crystal_colour red _exptl_crystal_density_diffrn 2.102 _exptl_crystal_description irregular _exptl_crystal_F_000 896 _exptl_crystal_size_max 0.26 _exptl_crystal_size_mid 0.18 _exptl_crystal_size_min 0.12 _refine_diff_density_max 0.724 _refine_diff_density_min -0.603 _refine_diff_density_rms 0.119 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_all 1.114 _refine_ls_goodness_of_fit_ref 1.148 _refine_ls_matrix_type full _refine_ls_number_parameters 129 _refine_ls_number_reflns 1486 _refine_ls_number_restraints 1 _refine_ls_restrained_S_all 1.107 _refine_ls_R_factor_all 0.0520 _refine_ls_R_factor_gt 0.0448 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0376P)^2^+7.4798P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_all 0.0973 _refine_ls_wR_factor_ref 0.0944 _reflns_number_gt 1331 _reflns_number_total 1486 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file ic9005373_si_001.cif _[local]_cod_data_source_block cob13b _[local]_cod_cif_authors_sg_H-M 'C 2/m' _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius ; _cod_database_code 4302553 #BEGIN Tags that were not found in dictionaries: _refine_ls_restrained_s_ref 1.140 #END Tags that were not found in dictionaries loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z' '-x, -y, -z' 'x, -y, z' '-x+1/2, -y+1/2, -z' 'x+1/2, -y+1/2, z' loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Co1 0.0099(4) 0.0103(4) 0.0088(4) 0.000 -0.0007(3) 0.000 Co2 0.0099(4) 0.0134(4) 0.0091(4) -0.0018(3) 0.0004(3) -0.0009(3) O1 0.023(2) 0.016(2) 0.015(2) 0.000 0.001(2) 0.000 N11 0.010(2) 0.010(2) 0.017(2) 0.000 -0.002(2) 0.000 N12 0.015(2) 0.018(3) 0.016(2) 0.000 -0.004(2) 0.000 N13 0.032(3) 0.015(3) 0.066(4) 0.000 -0.024(3) 0.000 N21 0.016(2) 0.016(2) 0.014(2) -0.0034(13) -0.0015(13) -0.0044(13) N22 0.0098(15) 0.010(2) 0.016(2) 0.0014(13) 0.0045(13) -0.0012(13) N23 0.0099(15) 0.016(2) 0.011(2) -0.0004(13) -0.0011(12) -0.0010(13) N31 0.011(2) 0.015(2) 0.012(2) -0.0005(13) 0.0008(12) -0.0011(13) N32 0.017(2) 0.008(2) 0.014(2) 0.000 -0.004(2) 0.000 N1 0.010(2) 0.008(2) 0.010(2) 0.000 0.000(2) 0.000 N2 0.0083(15) 0.013(2) 0.0093(15) -0.0011(13) 0.0000(11) -0.0005(12) N3 0.009(2) 0.012(2) 0.011(2) 0.000 0.001(2) 0.000 C2 0.011(2) 0.012(2) 0.015(2) -0.001(2) -0.0017(14) -0.0012(15) C1 0.008(2) 0.011(2) 0.009(2) -0.0003(14) 0.0012(13) -0.0011(14) C3 0.011(2) 0.013(2) 0.006(2) 0.000 -0.0016(13) 0.000 C4 0.009(2) 0.013(3) 0.006(2) 0.000 -0.003(2) 0.000 loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_occupancy _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_group Co1 Co 0.63260(6) 0.5000 0.05521(7) 0.0097(2) Uani 1 d S . Co2 Co 0.7500 0.7500 0.5000 0.0108(2) Uani 1 d S . O1 O 0.5653(3) 0.5000 0.2672(4) 0.0181(9) Uani 1 d SD . H5 H 0.5809 0.5542 0.3126 0.027 Uiso 1 d D . N11 N 0.5000 0.6031(3) 0.0000 0.0124(9) Uani 1 d S . N12 N 0.5000 0.6985(4) 0.0000 0.0163(10) Uani 1 d S . N13 N 0.5000 0.7879(4) 0.0000 0.037(2) Uani 1 d S . N21 N 0.7375(3) 0.6270(3) 0.1236(3) 0.0154(7) Uani 1 d . . N22 N 0.7825(2) 0.6481(2) 0.2305(3) 0.0119(7) Uani 1 d . . N23 N 0.8296(3) 0.6721(3) 0.3366(3) 0.0123(7) Uani 1 d . . N31 N 0.5887(3) 0.6830(3) 0.4392(3) 0.0127(7) Uani 1 d . . N32 N 0.5000 0.6846(3) 0.5000 0.0130(9) Uani 1 d S . N1 N 0.7336(4) 0.5000 -0.1405(4) 0.0093(9) Uani 1 d S . N2 N 0.7802(2) 0.5981(2) -0.3582(3) 0.0102(6) Uani 1 d . . N3 N 0.9295(4) 0.5000 -0.2327(4) 0.0106(9) Uani 1 d S . C2 C 0.9043(3) 0.5940(3) -0.3150(4) 0.0127(8) Uani 1 d . . H2A H 0.9519 0.5946 -0.3987 0.019 Uiso 1 calc R . H2B H 0.9226 0.6563 -0.2598 0.019 Uiso 1 calc R . C1 C 0.7106(3) 0.5960(3) -0.2269(4) 0.0093(7) Uani 1 d . . H1A H 0.7274 0.6585 -0.1713 0.014 Uiso 1 calc R . H1B H 0.6302 0.5979 -0.2516 0.014 Uiso 1 calc R . C3 C 0.8593(4) 0.5000 -0.1062(5) 0.0097(10) Uani 1 d S . H3A H 0.8772 0.5620 -0.0502 0.015 Uiso 0.50 calc PR . H3B H 0.8772 0.4380 -0.0502 0.015 Uiso 0.50 calc PR . C4 C 0.7551(4) 0.5000 -0.4383(5) 0.0096(10) Uani 1 d S . H4A H 0.7999 0.5000 -0.5244 0.014 Uiso 1 calc SR . H4B H 0.6751 0.5000 -0.4648 0.014 Uiso 1 calc SR . loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Co Co 0.3494 0.9721 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag N11 Co1 N11 77.0(2) 5_665 . yes N11 Co1 N21 167.47(12) 5_665 . yes N11 Co1 N21 91.97(13) . . yes N11 Co1 N21 91.97(13) 5_665 6_565 ? N11 Co1 N21 167.47(12) . 6_565 yes N21 Co1 N21 98.3(2) . 6_565 yes N11 Co1 O1 87.82(9) 5_665 . yes N11 Co1 O1 87.82(9) . . ? N21 Co1 O1 85.80(11) . . yes N21 Co1 O1 85.80(11) 6_565 . ? N11 Co1 N1 100.83(9) 5_665 . ? N11 Co1 N1 100.83(9) . . yes N21 Co1 N1 86.94(11) . . yes N21 Co1 N1 86.94(11) 6_565 . ? O1 Co1 N1 168.9(2) . . yes N23 Co2 N23 180.0 . 7_666 ? N23 Co2 N31 89.54(12) . 7_666 ? N23 Co2 N31 90.46(12) 7_666 7_666 yes N23 Co2 N31 90.46(12) . . ? N23 Co2 N31 89.54(12) 7_666 . ? N31 Co2 N31 180.0 7_666 . ? N23 Co2 N2 91.59(11) . 7_665 yes N23 Co2 N2 88.41(11) 7_666 7_665 ? N31 Co2 N2 87.92(11) 7_666 7_665 ? N31 Co2 N2 92.08(11) . 7_665 yes N23 Co2 N2 88.41(11) . 1_556 ? N23 Co2 N2 91.59(11) 7_666 1_556 ? N31 Co2 N2 92.08(11) 7_666 1_556 ? N31 Co2 N2 87.92(11) . 1_556 ? N2 Co2 N2 180.0 7_665 1_556 ? N12 N11 Co1 128.50(9) . 5_665 ? N12 N11 Co1 128.50(9) . . yes Co1 N11 Co1 103.0(2) 5_665 . yes N13 N12 N11 180.000(1) . . yes N22 N21 Co1 134.1(3) . . yes N21 N22 N23 177.9(4) . . yes N22 N23 Co2 123.4(3) . . yes N32 N31 Co2 129.2(2) . . yes N31 N32 N31 178.1(5) . 2_656 yes C1 N1 C1 109.2(4) 6_565 . ? C1 N1 C3 107.2(2) 6_565 . ? C1 N1 C3 107.2(2) . . ? C1 N1 Co1 111.5(2) 6_565 . ? C1 N1 Co1 111.5(2) . . ? C3 N1 Co1 110.1(3) . . ? C4 N2 C1 107.7(3) . . ? C4 N2 C2 107.5(3) . . ? C1 N2 C2 107.4(3) . . ? C4 N2 Co2 110.9(2) . 1_554 ? C1 N2 Co2 114.1(2) . 1_554 ? C2 N2 Co2 109.0(2) . 1_554 ? C2 N3 C2 109.8(4) 6_565 . ? C2 N3 C3 109.2(3) 6_565 . ? C2 N3 C3 109.2(3) . . ? N3 C2 N2 111.7(3) . . ? N3 C2 H2A 109.3 . . ? N2 C2 H2A 109.3 . . ? N3 C2 H2B 109.3 . . ? N2 C2 H2B 109.3 . . ? H2A C2 H2B 107.9 . . ? N1 C1 N2 112.1(3) . . ? N1 C1 H1A 109.2 . . ? N2 C1 H1A 109.2 . . ? N1 C1 H1B 109.2 . . ? N2 C1 H1B 109.2 . . ? H1A C1 H1B 107.9 . . ? N3 C3 N1 112.0(4) . . ? N3 C3 H3A 109.21 . . ? N1 C3 H3A 109.21 . . ? N3 C3 H3B 109.21 . . ? N1 C3 H3B 109.21 . . ? H3A C3 H3B 107.9 . . ? N2 C4 N2 113.4(4) . 6_565 ? N2 C4 H4A 108.9 . . ? N2 C4 H4A 108.9 6_565 . ? N2 C4 H4B 108.9 . . ? N2 C4 H4B 108.9 6_565 . ? H4A C4 H4B 107.7 . . ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag Co1 N11 2.093(3) 5_665 yes Co1 N11 2.093(3) . yes Co1 N21 2.123(3) . yes Co1 N21 2.123(3) 6_565 yes Co1 O1 2.159(4) . yes Co1 N1 2.201(4) . yes Co2 N23 2.059(3) . yes Co2 N23 2.059(3) 7_666 yes Co2 N31 2.148(3) 7_666 yes Co2 N31 2.148(3) . yes Co2 N2 2.370(3) 7_665 yes Co2 N2 2.370(3) 1_556 yes O1 H5 0.830 . ? N11 N12 1.206(6) . yes N11 Co1 2.093(3) 5_665 ? N12 N13 1.130(7) . yes N21 N22 1.172(4) . yes N22 N23 1.187(4) . yes N31 N32 1.188(3) . yes N32 N31 1.188(3) 2_656 yes N1 C1 1.488(4) 6_565 ? N1 C1 1.488(4) . ? N1 C3 1.506(6) . ? N2 C4 1.484(4) . ? N2 C1 1.489(4) . ? N2 C2 1.510(4) . ? N2 Co2 2.370(3) 1_554 yes N3 C2 1.452(4) 6_565 yes N3 C2 1.452(4) . ? N3 C3 1.455(6) . ? C2 H2A 0.97 . ? C2 H2B 0.97 . ? C1 H1A 0.97 . ? C1 H1B 0.97 . ? C3 H3A 0.97 . ? C3 H3B 0.97 . ? C4 N2 1.484(4) 6_565 ? C4 H4A 0.97 . ? C4 H4B 0.97 . ? loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_2 _geom_torsion_site_symmetry_3 _geom_torsion_site_symmetry_4 _geom_torsion_publ_flag N11 Co1 N11 N12 180.0 5_665 . . . ? N21 Co1 N11 N12 6.01(9) . . . . ? N21 Co1 N11 N12 151.1(5) 6_565 . . . ? O1 Co1 N11 N12 91.73(7) . . . . ? N11 Co1 N21 N22 94.2(6) 5_665 . . . ? N11 Co1 N21 N22 122.3(4) . . . . ? N21 Co1 N21 N22 -50.5(4) 6_565 . . . ? O1 Co1 N21 N22 34.6(4) . . . . ? N1 Co1 N21 N22 -137.0(4) . . . . ? N31 Co2 N23 N22 -152.5(3) 7_666 . . . ? N31 Co2 N23 N22 27.5(3) . . . . ? N2 Co2 N23 N22 -64.6(3) 7_665 . . . ? N2 Co2 N23 N22 115.4(3) 1_556 . . . ? N23 Co2 N31 N32 170.3(4) . . . . ? N23 Co2 N31 N32 -9.7(4) 7_666 . . . ? N2 Co2 N31 N32 -98.0(4) 7_665 . . . ? N2 Co2 N31 N32 82.0(4) 1_556 . . . ? N11 Co1 N1 C1 -21.8(3) 5_665 . . 6_565 ? N11 Co1 N1 C1 -100.5(2) . . . 6_565 ? N21 Co1 N1 C1 168.1(3) . . . 6_565 ? N21 Co1 N1 C1 69.6(2) 6_565 . . 6_565 ? O1 Co1 N1 C1 118.8(2) . . . 6_565 ? N11 Co1 N1 C1 100.5(2) 5_665 . . . ? N11 Co1 N1 C1 21.8(3) . . . . ? N21 Co1 N1 C1 -69.6(2) . . . . ? N21 Co1 N1 C1 -168.1(3) 6_565 . . . ? O1 Co1 N1 C1 -118.8(2) . . . . ? C2 N3 C2 N2 59.9(5) 6_565 . . . ? C3 N3 C2 N2 -59.8(4) . . . . ? C4 N2 C2 N3 -57.3(4) . . . . ? C1 N2 C2 N3 58.4(4) . . . . ? Co2 N2 C2 N3 -177.5(2) 1_554 . . . ? C1 N1 C1 N2 -57.5(4) 6_565 . . . ? C3 N1 C1 N2 58.3(4) . . . . ? Co1 N1 C1 N2 178.8(2) . . . . ? C4 N2 C1 N1 57.2(4) . . . . ? C2 N2 C1 N1 -58.3(4) . . . . ? Co2 N2 C1 N1 -179.2(2) 1_554 . . . ? C2 N3 C3 N1 -60.0(3) 6_565 . . . ? C2 N3 C3 N1 60.0(3) . . . . ? C1 N1 C3 N3 58.5(2) 6_565 . . . ? C1 N1 C3 N3 -58.5(2) . . . . ? C1 N2 C4 N2 -58.5(5) . . . 6_565 ? C2 N2 C4 N2 56.9(5) . . . 6_565 ? Co2 N2 C4 N2 176.0(2) 1_554 . . 6_565 ?