#------------------------------------------------------------------------------ #$Date: 2016-03-25 10:45:54 +0200 (Fri, 25 Mar 2016) $ #$Revision: 179763 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/00/59/7005932.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7005932 loop_ _publ_author_name 'Yen, Swee Kuan' 'Koh, Lip Lin' 'Huynh, Han Vinh' 'Hor, T. S. Andy' _publ_section_title ; Pd(II) complexes of N,S-heterocyclic carbenes with pendant and coordinated allyl function and their Suzuki coupling activities. ; _journal_issue 35 _journal_name_full 'Dalton transactions (Cambridge, England : 2003)' _journal_page_first 3952 _journal_page_last 3958 _journal_paper_doi 10.1039/b706968e _journal_year 2007 _chemical_formula_sum 'C23 H25 Br2 N3 O Pd S2' _chemical_formula_weight 689.80 _chemical_name_systematic ; ? ; _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 100.8480(10) _cell_angle_beta 103.3600(10) _cell_angle_gamma 117.5140(10) _cell_formula_units_Z 2 _cell_length_a 11.0177(5) _cell_length_b 11.7122(5) _cell_length_c 12.5018(6) _cell_measurement_reflns_used 6913 _cell_measurement_temperature 295(2) _cell_measurement_theta_max 29.20 _cell_measurement_theta_min 2.24 _cell_volume 1308.22(11) _computing_cell_refinement 'Bruker SMART' _computing_data_collection 'Bruker SMART' _computing_data_reduction 'Bruker SAINT' _computing_molecular_graphics 'Bruker SHELXTL' _computing_publication_material 'Bruker SHELXTL' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 295(2) _diffrn_measured_fraction_theta_full 0.999 _diffrn_measured_fraction_theta_max 0.999 _diffrn_measurement_device_type 'CCD area detector' _diffrn_measurement_method 'phi and omega scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0240 _diffrn_reflns_av_sigmaI/netI 0.0275 _diffrn_reflns_limit_h_max 14 _diffrn_reflns_limit_h_min -14 _diffrn_reflns_limit_k_max 15 _diffrn_reflns_limit_k_min -15 _diffrn_reflns_limit_l_max 16 _diffrn_reflns_limit_l_min -16 _diffrn_reflns_number 17357 _diffrn_reflns_theta_full 27.50 _diffrn_reflns_theta_max 27.50 _diffrn_reflns_theta_min 1.78 _exptl_absorpt_coefficient_mu 3.944 _exptl_absorpt_correction_T_max 0.4512 _exptl_absorpt_correction_T_min 0.3015 _exptl_absorpt_correction_type 'Sadabs, (Sheldrick 2001)' _exptl_crystal_colour YELLOW _exptl_crystal_density_diffrn 1.751 _exptl_crystal_density_meas 0 _exptl_crystal_density_method 'not measured' _exptl_crystal_description BLOCK _exptl_crystal_F_000 680 _exptl_crystal_size_max 0.40 _exptl_crystal_size_mid 0.30 _exptl_crystal_size_min 0.24 _refine_diff_density_max 0.461 _refine_diff_density_min -0.332 _refine_diff_density_rms 0.076 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.065 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 299 _refine_ls_number_reflns 6008 _refine_ls_number_restraints 2 _refine_ls_restrained_S_all 1.067 _refine_ls_R_factor_all 0.0348 _refine_ls_R_factor_gt 0.0275 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0407P)^2^+0.0313P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0697 _refine_ls_wR_factor_ref 0.0722 _reflns_number_gt 5137 _reflns_number_total 6008 _reflns_threshold_expression >2sigma(I) _cod_data_source_file b706968e.txt _cod_data_source_block 5344 _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Triclinic' changed to 'triclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius ; _cod_original_cell_volume 1308.22(10) _cod_original_sg_symbol_H-M P-1 _cod_database_code 7005932 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group Pd1 Pd 0.730432(18) 0.469262(17) 0.482212(15) 0.03604(6) Uani 1 1 d . . . Br1 Br 0.65090(3) 0.33227(3) 0.27576(2) 0.05631(9) Uani 1 1 d . . . Br2 Br 0.59985(3) 0.26406(3) 0.53599(3) 0.05492(9) Uani 1 1 d . . . S1 S 1.03710(7) 0.69642(7) 0.48353(6) 0.04634(15) Uani 1 1 d . . . S2 S 0.66138(7) 0.63574(7) 0.66500(5) 0.04452(14) Uani 1 1 d . . . N1 N 0.8159(2) 0.71013(19) 0.39873(16) 0.0386(4) Uani 1 1 d . . . N2 N 0.8892(2) 0.6296(2) 0.73894(17) 0.0418(4) Uani 1 1 d . . . C1 C 0.8533(3) 0.6351(2) 0.44927(19) 0.0380(5) Uani 1 1 d . . . C2 C 0.9315(3) 0.8206(2) 0.38533(19) 0.0383(5) Uani 1 1 d . . . C3 C 0.9226(3) 0.9163(3) 0.3387(2) 0.0458(6) Uani 1 1 d . . . H3 H 0.8338 0.9113 0.3104 0.055 Uiso 1 1 calc R . . C4 C 1.0499(3) 1.0189(3) 0.3360(2) 0.0505(6) Uani 1 1 d . . . H4 H 1.0473 1.0848 0.3057 0.061 Uiso 1 1 calc R . . C5 C 1.1830(3) 1.0257(3) 0.3777(2) 0.0542(7) Uani 1 1 d . . . H5 H 1.2673 1.0958 0.3745 0.065 Uiso 1 1 calc R . . C6 C 1.1914(3) 0.9305(3) 0.4236(2) 0.0502(6) Uani 1 1 d . . . H6 H 1.2799 0.9349 0.4513 0.060 Uiso 1 1 calc R . . C7 C 1.0635(3) 0.8279(2) 0.4270(2) 0.0407(5) Uani 1 1 d . . . C8 C 0.6666(3) 0.6818(3) 0.3598(2) 0.0526(6) Uani 1 1 d . B . H8A H 0.6696 0.7666 0.3875 0.063 Uiso 1 1 calc R . . H8B H 0.6105 0.6196 0.3952 0.063 Uiso 1 1 calc R . . C9 C 0.5889(4) 0.6208(4) 0.2304(4) 0.0887(12) Uani 1 1 d D . . H9 H 0.6190 0.5676 0.1934 0.106 Uiso 1 1 calc R A 1 C10 C 0.4970(8) 0.6265(7) 0.1657(6) 0.110(2) Uani 0.65 1 d P B 1 H10A H 0.4947 0.6230 0.0902 0.131 Uiso 0.65 1 calc PR B 1 H10B H 0.4269 0.6346 0.1900 0.131 Uiso 0.65 1 calc PR B 1 C10A C 0.6268(17) 0.6130(15) 0.1498(10) 0.114(4) Uiso 0.35 1 d PD B 2 H10A' H 0.5752 0.6146 0.0803 0.136 Uiso 0.35 1 calc PR B 2 H10B' H 0.7082 0.6054 0.1556 0.136 Uiso 0.35 1 calc PR B 2 C11 C 0.7785(2) 0.5850(2) 0.6413(2) 0.0375(5) Uani 1 1 d . . . C12 C 0.8877(3) 0.7068(3) 0.8391(2) 0.0445(6) Uani 1 1 d . . . C13 C 0.9906(3) 0.7663(3) 0.9525(2) 0.0633(8) Uani 1 1 d . . . H13 H 1.0731 0.7593 0.9702 0.076 Uiso 1 1 calc R . . C14 C 0.9652(4) 0.8359(4) 1.0373(3) 0.0773(10) Uani 1 1 d . . . H14 H 1.0325 0.8768 1.1138 0.093 Uiso 1 1 calc R . . C15 C 0.8428(4) 0.8472(4) 1.0127(3) 0.0713(9) Uani 1 1 d . . . H15 H 0.8290 0.8943 1.0727 0.086 Uiso 1 1 calc R . . C16 C 0.7420(3) 0.7900(3) 0.9013(3) 0.0595(7) Uani 1 1 d . . . H16 H 0.6602 0.7980 0.8843 0.071 Uiso 1 1 calc R . . C17 C 0.7658(3) 0.7192(3) 0.8138(2) 0.0445(5) Uani 1 1 d . . . C18 C 1.0055(3) 0.5984(3) 0.7461(2) 0.0544(7) Uani 1 1 d . D . H18A H 1.1004 0.6825 0.7887 0.065 Uiso 1 1 calc R . . H18B H 1.0013 0.5639 0.6677 0.065 Uiso 1 1 calc R . . C19 C 0.9933(5) 0.4969(5) 0.8043(3) 0.0871(12) Uani 1 1 d D . . H19 H 0.8957 0.4317 0.7884 0.104 Uiso 1 1 calc R C 1 C20 C 1.0767(8) 0.4758(8) 0.8671(5) 0.099(2) Uani 0.65 1 d P D 1 H20A H 1.0447 0.4230 0.9132 0.119 Uiso 0.65 1 calc PR D 1 H20B H 1.1726 0.5125 0.8693 0.119 Uiso 0.65 1 calc PR D 1 C20A C 0.9051(12) 0.4301(11) 0.8402(11) 0.096(3) Uiso 0.35 1 d PD D 2 H20A' H 0.9296 0.3927 0.8947 0.115 Uiso 0.35 1 calc PR D 2 H20B' H 0.8109 0.4149 0.8141 0.115 Uiso 0.35 1 calc PR D 2 C13S C 0.4444(7) 0.8501(6) 0.0462(4) 0.153(2) Uani 1 1 d . . . H13A H 0.5226 0.8590 0.0200 0.230 Uiso 1 1 calc R . . H13B H 0.3852 0.8734 -0.0030 0.230 Uiso 1 1 calc R . . H13C H 0.3847 0.7573 0.0425 0.230 Uiso 1 1 calc R . . C14S C 0.4042(6) 0.9400(5) 0.2187(5) 0.1275(19) Uani 1 1 d . . . H14A H 0.4571 0.9983 0.2992 0.191 Uiso 1 1 calc R . . H14B H 0.3387 0.8482 0.2143 0.191 Uiso 1 1 calc R . . H14C H 0.3485 0.9727 0.1787 0.191 Uiso 1 1 calc R . . C15S C 0.6497(5) 1.0239(4) 0.2200(4) 0.0893(12) Uani 1 1 d . . . H15S H 0.6828 1.0787 0.2972 0.107 Uiso 1 1 calc R . . N1S N 0.5055(4) 0.9410(3) 0.1652(3) 0.0798(8) Uani 1 1 d . . . O1S O 0.7435(4) 1.0350(4) 0.1784(3) 0.1261(12) Uani 1 1 d . . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Pd1 0.03207(10) 0.03326(10) 0.03965(10) 0.01041(7) 0.01340(7) 0.01556(8) Br1 0.05545(17) 0.05418(17) 0.04877(15) 0.00313(12) 0.01578(12) 0.02795(14) Br2 0.04762(16) 0.04318(15) 0.07309(19) 0.02522(13) 0.02630(14) 0.01948(12) S1 0.0367(3) 0.0473(3) 0.0569(4) 0.0224(3) 0.0174(3) 0.0218(3) S2 0.0374(3) 0.0460(3) 0.0480(3) 0.0119(3) 0.0144(3) 0.0225(3) N1 0.0338(10) 0.0379(10) 0.0400(10) 0.0110(8) 0.0142(8) 0.0163(8) N2 0.0406(11) 0.0472(11) 0.0406(10) 0.0144(9) 0.0175(9) 0.0245(9) C1 0.0366(12) 0.0381(12) 0.0351(11) 0.0081(9) 0.0143(9) 0.0176(10) C2 0.0397(12) 0.0342(11) 0.0342(11) 0.0082(9) 0.0146(10) 0.0153(10) C3 0.0477(14) 0.0454(14) 0.0431(13) 0.0142(11) 0.0151(11) 0.0247(12) C4 0.0600(17) 0.0407(13) 0.0488(14) 0.0187(11) 0.0231(13) 0.0225(13) C5 0.0505(16) 0.0422(14) 0.0581(16) 0.0158(12) 0.0254(13) 0.0136(12) C6 0.0399(14) 0.0482(14) 0.0578(15) 0.0179(12) 0.0191(12) 0.0192(12) C7 0.0401(13) 0.0371(12) 0.0404(12) 0.0114(10) 0.0159(10) 0.0171(10) C8 0.0406(14) 0.0569(16) 0.0660(17) 0.0308(14) 0.0201(12) 0.0262(13) C9 0.053(2) 0.095(3) 0.087(3) 0.037(2) -0.0006(18) 0.0261(19) C10 0.099(5) 0.129(6) 0.094(5) 0.036(4) 0.001(4) 0.072(5) C11 0.0356(12) 0.0331(11) 0.0445(12) 0.0164(10) 0.0191(10) 0.0156(10) C12 0.0435(14) 0.0464(14) 0.0419(13) 0.0108(11) 0.0166(11) 0.0236(12) C13 0.0598(18) 0.083(2) 0.0453(15) 0.0116(14) 0.0131(13) 0.0433(17) C14 0.077(2) 0.091(3) 0.0459(16) -0.0015(16) 0.0124(15) 0.045(2) C15 0.076(2) 0.079(2) 0.0541(18) 0.0028(16) 0.0251(16) 0.0447(19) C16 0.0601(18) 0.0629(18) 0.0574(17) 0.0094(14) 0.0254(14) 0.0364(15) C17 0.0419(13) 0.0412(13) 0.0490(14) 0.0140(11) 0.0198(11) 0.0200(11) C18 0.0537(16) 0.0753(19) 0.0476(14) 0.0188(13) 0.0190(12) 0.0448(15) C19 0.113(3) 0.123(3) 0.073(2) 0.044(2) 0.037(2) 0.093(3) C20 0.122(5) 0.141(6) 0.092(4) 0.070(4) 0.048(4) 0.098(5) C13S 0.168(6) 0.130(5) 0.095(4) -0.011(3) 0.019(4) 0.060(4) C14S 0.121(4) 0.101(4) 0.154(5) 0.037(3) 0.077(4) 0.045(3) C15S 0.108(3) 0.079(3) 0.087(3) 0.021(2) 0.019(2) 0.065(3) N1S 0.087(2) 0.0637(17) 0.0707(18) 0.0094(14) 0.0218(16) 0.0347(17) O1S 0.108(2) 0.126(3) 0.173(3) 0.039(2) 0.062(2) 0.084(2) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Br Br -0.2901 2.4595 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Pd Pd -0.9988 1.0072 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag C1 Pd1 C11 89.78(9) . . ? C1 Pd1 Br1 88.91(6) . . ? C11 Pd1 Br1 173.66(7) . . ? C1 Pd1 Br2 174.15(7) . . ? C11 Pd1 Br2 88.68(6) . . ? Br1 Pd1 Br2 93.216(12) . . ? C1 S1 C7 92.46(11) . . ? C11 S2 C17 92.47(12) . . ? C1 N1 C2 115.29(19) . . ? C1 N1 C8 123.0(2) . . ? C2 N1 C8 121.7(2) . . ? C11 N2 C12 115.4(2) . . ? C11 N2 C18 123.3(2) . . ? C12 N2 C18 121.2(2) . . ? N1 C1 S1 110.81(16) . . ? N1 C1 Pd1 129.99(17) . . ? S1 C1 Pd1 119.16(13) . . ? C7 C2 C3 121.2(2) . . ? C7 C2 N1 112.2(2) . . ? C3 C2 N1 126.7(2) . . ? C4 C3 C2 117.6(2) . . ? C3 C4 C5 121.1(2) . . ? C6 C5 C4 121.2(3) . . ? C5 C6 C7 117.7(3) . . ? C2 C7 C6 121.3(2) . . ? C2 C7 S1 109.28(17) . . ? C6 C7 S1 129.4(2) . . ? N1 C8 C9 113.9(3) . . ? C10 C9 C10A 82.8(9) . . ? C10 C9 C8 132.8(6) . . ? C10A C9 C8 134.6(9) . . ? N2 C11 S2 111.08(17) . . ? N2 C11 Pd1 130.00(18) . . ? S2 C11 Pd1 118.89(13) . . ? C17 C12 C13 120.8(2) . . ? C17 C12 N2 111.8(2) . . ? C13 C12 N2 127.4(2) . . ? C14 C13 C12 117.2(3) . . ? C13 C14 C15 122.2(3) . . ? C16 C15 C14 120.8(3) . . ? C15 C16 C17 118.0(3) . . ? C12 C17 C16 121.0(2) . . ? C12 C17 S2 109.21(18) . . ? C16 C17 S2 129.8(2) . . ? N2 C18 C19 113.5(3) . . ? C20A C19 C20 86.4(8) . . ? C20A C19 C18 133.0(8) . . ? C20 C19 C18 137.0(6) . . ? O1S C15S N1S 126.1(4) . . ? C15S N1S C14S 122.2(4) . . ? C15S N1S C13S 120.8(4) . . ? C14S N1S C13S 117.0(4) . . ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag Pd1 C1 1.976(2) . ? Pd1 C11 1.977(2) . ? Pd1 Br1 2.4700(3) . ? Pd1 Br2 2.4816(3) . ? S1 C1 1.715(2) . ? S1 C7 1.745(2) . ? S2 C11 1.710(2) . ? S2 C17 1.739(3) . ? N1 C1 1.328(3) . ? N1 C2 1.408(3) . ? N1 C8 1.456(3) . ? N2 C11 1.317(3) . ? N2 C12 1.408(3) . ? N2 C18 1.474(3) . ? C2 C7 1.383(3) . ? C2 C3 1.388(3) . ? C3 C4 1.376(4) . ? C4 C5 1.397(4) . ? C5 C6 1.376(4) . ? C6 C7 1.383(3) . ? C8 C9 1.490(5) . ? C9 C10 1.179(6) . ? C9 C10A 1.181(5) . ? C12 C17 1.388(4) . ? C12 C13 1.392(4) . ? C13 C14 1.375(4) . ? C14 C15 1.385(5) . ? C15 C16 1.367(4) . ? C16 C17 1.394(4) . ? C18 C19 1.478(5) . ? C19 C20A 1.179(5) . ? C19 C20 1.212(6) . ? C13S N1S 1.441(5) . ? C14S N1S 1.425(5) . ? C15S O1S 1.227(5) . ? C15S N1S 1.325(5) . ?