#------------------------------------------------------------------------------ #$Date: 2019-11-17 14:18:02 +0200 (Sun, 17 Nov 2019) $ #$Revision: 230443 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/05/72/7057224.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7057224 loop_ _publ_author_name 'Fereidoonnezhad, Masood' 'Ramezani, Zahra' 'Nikravesh, Mahshid' 'Zangeneh, Jalalaldin' 'Golbon Haghighi, Mohsen' 'Faghih, Zahra' 'Notash, Behrouz' 'Shahsavari, Hamid R.' _publ_section_title ; Cycloplatinated(ii) complexes bearing an O,S-heterocyclic ligand: search for anticancer drugs ; _journal_issue 9 _journal_name_full 'New Journal of Chemistry' _journal_page_first 7177 _journal_paper_doi 10.1039/C8NJ01332B _journal_volume 42 _journal_year 2018 _chemical_formula_moiety 'C16 H12 N2 O Pt S' _chemical_formula_sum 'C16 H12 N2 O Pt S' _chemical_formula_weight 475.42 _chemical_melting_point 501 _space_group_IT_number 14 _space_group_name_Hall '-P 2yn' _space_group_name_H-M_alt 'P 1 21/n 1' _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _audit_update_record ; 2017-08-14 deposited with the CCDC. 2018-03-28 downloaded from the CCDC. ; _cell_angle_alpha 90.00 _cell_angle_beta 93.80(3) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 8.6392(17) _cell_length_b 8.6163(17) _cell_length_c 20.066(4) _cell_measurement_reflns_used 2624 _cell_measurement_temperature 298(2) _cell_measurement_theta_max 25.00 _cell_measurement_theta_min 2.57 _cell_volume 1490.4(5) _computing_cell_refinement 'X-Area (Stoe & Cie GmbH, 2005)' _computing_data_collection 'X-Area (Stoe & Cie GmbH, 2005)' _computing_data_reduction 'X-Area (Stoe & Cie GmbH, 2005)' _computing_molecular_graphics 'ORTEP-3 for Windows (Farrugia, 1997)' _computing_publication_material 'WinGX (Farrugia, 1999)' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 2008)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 2008)' _diffrn_ambient_temperature 298(2) _diffrn_detector_area_resol_mean '0.15 mm' _diffrn_measured_fraction_theta_full 0.998 _diffrn_measured_fraction_theta_max 0.998 _diffrn_measurement_device_type 'STOE IPDS 2T' _diffrn_measurement_method 'rotation method' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.1200 _diffrn_reflns_av_sigmaI/netI 0.1221 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min -8 _diffrn_reflns_limit_k_max 10 _diffrn_reflns_limit_k_min -10 _diffrn_reflns_limit_l_max 23 _diffrn_reflns_limit_l_min -23 _diffrn_reflns_number 7906 _diffrn_reflns_theta_full 25.00 _diffrn_reflns_theta_max 25.00 _diffrn_reflns_theta_min 2.57 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 9.553 _exptl_absorpt_correction_T_max 0.4486 _exptl_absorpt_correction_T_min 0.2511 _exptl_absorpt_correction_type numerical _exptl_absorpt_process_details 'shape of crystal determined optically' _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 2.119 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 896 _exptl_crystal_size_max 0.20 _exptl_crystal_size_mid 0.10 _exptl_crystal_size_min 0.10 _refine_diff_density_max 1.077 _refine_diff_density_min -0.885 _refine_diff_density_rms 0.156 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 0.947 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 190 _refine_ls_number_reflns 2624 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 0.947 _refine_ls_R_factor_all 0.1168 _refine_ls_R_factor_gt 0.0567 _refine_ls_shift/su_max 0.008 _refine_ls_shift/su_mean 0.001 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0172P)^2^+0.0000P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0728 _refine_ls_wR_factor_ref 0.0835 _reflns_number_gt 1605 _reflns_number_total 2624 _reflns_threshold_expression >2sigma(I) _cod_data_source_file c8nj01332b2.cif _cod_data_source_block khc1016b _cod_depositor_comments 'Adding full bibliography for 7057224.cif.' _cod_original_sg_symbol_H-M 'P 21/n' _cod_database_code 7057224 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags Pt1 Pt 0.56573(7) 0.91651(6) 0.60302(2) 0.04896(18) Uani 1 1 d . S1 S 0.3386(5) 0.7992(4) 0.57841(19) 0.0656(11) Uani 1 1 d . O1 O 0.6355(12) 0.8107(10) 0.5163(4) 0.060(3) Uani 1 1 d . N1 N 0.7676(13) 1.0307(10) 0.6258(5) 0.047(3) Uani 1 1 d . N2 N 0.5222(19) 0.7284(13) 0.4819(5) 0.064(4) Uani 1 1 d . C1 C 0.5098(16) 1.0201(14) 0.6864(6) 0.050(3) Uani 1 1 d . C2 C 0.3784(17) 1.0170(14) 0.7187(6) 0.051(3) Uani 1 1 d . H2 H 0.2966 0.9572 0.7003 0.062 Uiso 1 1 calc R C3 C 0.3557(19) 1.097(2) 0.7774(7) 0.079(4) Uani 1 1 d . H3 H 0.2621 1.0907 0.7977 0.094 Uiso 1 1 calc R C4 C 0.482(2) 1.1878(17) 0.8055(7) 0.068(5) Uani 1 1 d . H4 H 0.4705 1.2439 0.8444 0.082 Uiso 1 1 calc R C5 C 0.621(2) 1.1937(16) 0.7756(7) 0.062(4) Uani 1 1 d . H5 H 0.7036 1.2515 0.7945 0.074 Uiso 1 1 calc R C6 C 0.6356(16) 1.1102(15) 0.7160(6) 0.048(3) Uani 1 1 d . C7 C 0.7766(18) 1.1163(13) 0.6818(6) 0.052(4) Uani 1 1 d . C8 C 0.912(2) 1.1950(17) 0.6991(7) 0.066(5) Uani 1 1 d . H8 H 0.9195 1.2512 0.7387 0.079 Uiso 1 1 calc R C9 C 1.0345(19) 1.1932(16) 0.6599(8) 0.068(4) Uani 1 1 d . H9 H 1.1231 1.2510 0.6717 0.082 Uiso 1 1 calc R C10 C 1.0257(16) 1.1050(17) 0.6030(7) 0.071(4) Uani 1 1 d . H10 H 1.1090 1.0993 0.5761 0.085 Uiso 1 1 calc R C11 C 0.885(2) 1.0216(15) 0.5859(7) 0.070(5) Uani 1 1 d . H11 H 0.8752 0.9617 0.5473 0.084 Uiso 1 1 calc R C12 C 0.383(2) 0.7095(14) 0.5054(7) 0.060(4) Uani 1 1 d . C13 C 0.273(2) 0.6180(15) 0.4666(7) 0.072(5) Uani 1 1 d . H13 H 0.1726 0.6054 0.4798 0.086 Uiso 1 1 calc R C14 C 0.318(2) 0.5492(17) 0.4096(9) 0.081(6) Uani 1 1 d . H14 H 0.2487 0.4841 0.3855 0.097 Uiso 1 1 calc R C15 C 0.458(2) 0.573(2) 0.3878(8) 0.080(6) Uani 1 1 d . H15 H 0.4840 0.5274 0.3482 0.096 Uiso 1 1 calc R C16 C 0.564(2) 0.6645(17) 0.4225(7) 0.078(5) Uani 1 1 d . H16 H 0.6611 0.6831 0.4067 0.094 Uiso 1 1 calc R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Pt1 0.0597(3) 0.0401(2) 0.0456(3) 0.0005(4) -0.00850(19) 0.0025(4) S1 0.066(3) 0.061(2) 0.068(2) -0.007(2) -0.003(2) -0.004(2) O1 0.072(8) 0.047(5) 0.059(6) -0.005(5) -0.002(5) -0.003(5) N1 0.049(8) 0.040(6) 0.052(6) -0.007(5) 0.010(5) 0.005(5) N2 0.101(12) 0.042(7) 0.048(7) 0.006(6) -0.015(7) 0.005(8) C1 0.037(9) 0.048(7) 0.064(8) 0.006(6) 0.004(7) 0.007(7) C2 0.054(10) 0.044(7) 0.055(8) -0.003(6) -0.004(7) -0.008(7) C3 0.076(12) 0.087(11) 0.073(10) 0.000(11) 0.007(8) 0.016(12) C4 0.089(14) 0.071(10) 0.045(8) -0.009(8) 0.012(9) 0.028(10) C5 0.068(12) 0.059(9) 0.057(9) -0.010(8) -0.007(8) -0.001(8) C6 0.053(10) 0.050(9) 0.040(7) 0.002(7) 0.007(6) 0.012(7) C7 0.067(11) 0.039(8) 0.047(7) -0.012(6) -0.021(7) 0.013(7) C8 0.055(12) 0.066(10) 0.073(10) -0.025(8) -0.013(9) -0.002(9) C9 0.041(10) 0.064(10) 0.097(12) 0.005(9) -0.011(9) -0.007(8) C10 0.062(12) 0.072(10) 0.078(9) 0.004(11) 0.002(8) 0.010(9) C11 0.083(13) 0.058(9) 0.064(9) -0.018(7) -0.033(9) 0.013(9) C12 0.095(14) 0.025(7) 0.056(9) 0.001(6) -0.020(9) -0.010(8) C13 0.086(13) 0.051(10) 0.075(10) 0.000(8) -0.026(9) -0.008(8) C14 0.089(15) 0.058(11) 0.090(12) -0.033(9) -0.046(11) 0.000(10) C15 0.098(17) 0.064(9) 0.073(11) -0.012(11) -0.031(11) 0.014(13) C16 0.114(16) 0.061(9) 0.056(10) -0.002(8) -0.016(10) 0.012(10) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Pt Pt -1.7033 8.3905 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C1 Pt1 N1 81.1(5) C1 Pt1 O1 177.3(5) N1 Pt1 O1 96.2(4) C1 Pt1 S1 97.5(4) N1 Pt1 S1 177.8(3) O1 Pt1 S1 85.2(3) C12 S1 Pt1 98.5(6) N2 O1 Pt1 114.4(9) C11 N1 C7 122.0(12) C11 N1 Pt1 120.8(9) C7 N1 Pt1 117.2(10) C12 N2 O1 121.3(12) C12 N2 C16 123.4(14) O1 N2 C16 115.2(15) C2 C1 C6 116.9(12) C2 C1 Pt1 131.2(10) C6 C1 Pt1 111.9(10) C1 C2 C3 124.8(13) C1 C2 H2 117.6 C3 C2 H2 117.6 C2 C3 C4 117.3(14) C2 C3 H3 121.4 C4 C3 H3 121.4 C5 C4 C3 120.9(14) C5 C4 H4 119.5 C3 C4 H4 119.5 C4 C5 C6 118.7(14) C4 C5 H5 120.7 C6 C5 H5 120.7 C5 C6 C1 121.4(13) C5 C6 C7 120.8(13) C1 C6 C7 117.8(12) N1 C7 C8 118.9(15) N1 C7 C6 112.0(12) C8 C7 C6 129.1(13) C9 C8 C7 122.0(14) C9 C8 H8 119.0 C7 C8 H8 119.0 C8 C9 C10 119.0(14) C8 C9 H9 120.5 C10 C9 H9 120.5 C9 C10 C11 118.5(14) C9 C10 H10 120.8 C11 C10 H10 120.8 N1 C11 C10 119.5(13) N1 C11 H11 120.3 C10 C11 H11 120.3 N2 C12 C13 117.4(15) N2 C12 S1 120.4(11) C13 C12 S1 122.1(15) C14 C13 C12 118.7(17) C14 C13 H13 120.6 C12 C13 H13 120.6 C15 C14 C13 121.3(15) C15 C14 H14 119.3 C13 C14 H14 119.3 C14 C15 C16 121.3(17) C14 C15 H15 119.4 C16 C15 H15 119.4 C15 C16 N2 117.7(18) C15 C16 H16 121.1 N2 C16 H16 121.1 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance Pt1 C1 1.984(13) Pt1 N1 2.028(11) Pt1 O1 2.089(9) Pt1 S1 2.233(4) S1 C12 1.723(15) O1 N2 1.359(14) N1 C11 1.333(18) N1 C7 1.342(14) N2 C12 1.327(18) N2 C16 1.382(18) C1 C2 1.344(18) C1 C6 1.432(17) C2 C3 1.388(17) C2 H2 0.9300 C3 C4 1.43(2) C3 H3 0.9300 C4 C5 1.38(2) C4 H4 0.9300 C5 C6 1.410(16) C5 H5 0.9300 C6 C7 1.438(19) C7 C8 1.374(19) C8 C9 1.36(2) C8 H8 0.9300 C9 C10 1.369(18) C9 H9 0.9300 C10 C11 1.436(19) C10 H10 0.9300 C11 H11 0.9300 C12 C13 1.429(18) C13 C14 1.37(2) C13 H13 0.9300 C14 C15 1.33(2) C14 H14 0.9300 C15 C16 1.36(2) C15 H15 0.9300 C16 H16 0.9300 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C1 Pt1 S1 C12 179.4(5) N1 Pt1 S1 C12 130(8) O1 Pt1 S1 C12 -1.0(5) C1 Pt1 O1 N2 175(9) N1 Pt1 O1 N2 -175.3(7) S1 Pt1 O1 N2 3.0(7) C1 Pt1 N1 C11 -178.4(10) O1 Pt1 N1 C11 2.1(10) S1 Pt1 N1 C11 -128(8) C1 Pt1 N1 C7 0.8(8) O1 Pt1 N1 C7 -178.8(8) S1 Pt1 N1 C7 51(9) Pt1 O1 N2 C12 -4.7(14) Pt1 O1 N2 C16 176.7(8) N1 Pt1 C1 C2 180.0(13) O1 Pt1 C1 C2 -170(8) S1 Pt1 C1 C2 1.6(12) N1 Pt1 C1 C6 -1.2(8) O1 Pt1 C1 C6 9(9) S1 Pt1 C1 C6 -179.6(8) C6 C1 C2 C3 1.2(19) Pt1 C1 C2 C3 180.0(10) C1 C2 C3 C4 0(2) C2 C3 C4 C5 -1(2) C3 C4 C5 C6 1(2) C4 C5 C6 C1 -0.2(19) C4 C5 C6 C7 178.2(12) C2 C1 C6 C5 -1.0(17) Pt1 C1 C6 C5 -180.0(9) C2 C1 C6 C7 -179.4(11) Pt1 C1 C6 C7 1.6(14) C11 N1 C7 C8 -1.1(17) Pt1 N1 C7 C8 179.8(9) C11 N1 C7 C6 179.0(11) Pt1 N1 C7 C6 -0.1(12) C5 C6 C7 N1 -179.4(10) C1 C6 C7 N1 -1.0(15) C5 C6 C7 C8 1(2) C1 C6 C7 C8 179.1(12) N1 C7 C8 C9 2(2) C6 C7 C8 C9 -177.7(13) C7 C8 C9 C10 -3(2) C8 C9 C10 C11 2(2) C7 N1 C11 C10 0.3(18) Pt1 N1 C11 C10 179.4(8) C9 C10 C11 N1 -0.7(18) O1 N2 C12 C13 -178.5(10) C16 N2 C12 C13 0.0(19) O1 N2 C12 S1 3.9(17) C16 N2 C12 S1 -177.6(9) Pt1 S1 C12 N2 -1.1(11) Pt1 S1 C12 C13 -178.6(10) N2 C12 C13 C14 3.1(18) S1 C12 C13 C14 -179.3(11) C12 C13 C14 C15 -4(2) C13 C14 C15 C16 2(3) C14 C15 C16 N2 1(2) C12 N2 C16 C15 -2(2) O1 N2 C16 C15 176.3(11)