#------------------------------------------------------------------------------ #$Date: 2016-03-26 03:36:43 +0200 (Sat, 26 Mar 2016) $ #$Revision: 180189 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/10/85/7108548.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7108548 loop_ _publ_author_name 'Qi Xing' 'Lijun Shi' 'Rui Lang' 'Chungu Xia' 'Fuwei Li' _publ_section_title ; Palladium-catalyzed mono- and double-carbonylation of indoles with amines controllably leading to amides and alpha-ketoamides ; _journal_name_full Chem.Commun. _journal_page_first 11023 _journal_paper_doi 10.1039/c2cc36341k _journal_volume 48 _journal_year 2012 _chemical_formula_sum 'C18 H15 N2 O2' _chemical_formula_weight 291.32 _chemical_name_systematic ; ? ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 97.577(4) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 8.604(3) _cell_length_b 17.584(7) _cell_length_c 10.173(4) _cell_measurement_reflns_used 2303 _cell_measurement_temperature 296(2) _cell_measurement_theta_max 28.21 _cell_measurement_theta_min 2.32 _cell_volume 1525.7(10) _computing_cell_refinement 'Bruker SAINT' _computing_data_collection 'Bruker APEX2' _computing_data_reduction 'Bruker SAINT' _computing_molecular_graphics 'Bruker SHELXTL' _computing_publication_material 'Bruker SHELXTL' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 2008)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 2008)' _diffrn_ambient_temperature 296(2) _diffrn_measured_fraction_theta_full 0.990 _diffrn_measured_fraction_theta_max 0.990 _diffrn_measurement_device_type 'Bruker APEX-II CCD' _diffrn_measurement_method '\f and \w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0337 _diffrn_reflns_av_sigmaI/netI 0.0480 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min -10 _diffrn_reflns_limit_k_max 14 _diffrn_reflns_limit_k_min -21 _diffrn_reflns_limit_l_max 12 _diffrn_reflns_limit_l_min -10 _diffrn_reflns_number 7216 _diffrn_reflns_theta_full 25.50 _diffrn_reflns_theta_max 25.50 _diffrn_reflns_theta_min 2.32 _exptl_absorpt_coefficient_mu 0.084 _exptl_absorpt_correction_T_max 0.9867 _exptl_absorpt_correction_T_min 0.9809 _exptl_absorpt_correction_type multi-scan _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.268 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 612 _exptl_crystal_size_max 0.23 _exptl_crystal_size_mid 0.21 _exptl_crystal_size_min 0.16 _refine_diff_density_max 0.380 _refine_diff_density_min -0.216 _refine_diff_density_rms 0.040 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.045 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 200 _refine_ls_number_reflns 2810 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.045 _refine_ls_R_factor_all 0.1021 _refine_ls_R_factor_gt 0.0569 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0734P)^2^+0.0791P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1367 _refine_ls_wR_factor_ref 0.1587 _reflns_number_gt 1700 _reflns_number_total 2810 _reflns_threshold_expression >2sigma(I) _cod_data_source_file c2cc36341k.txt _cod_data_source_block p21ca _cod_original_sg_symbol_H-M P2(1)/c _cod_database_code 7108548 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags C1 C 0.3872(3) 0.56231(13) 0.8437(2) 0.0466(6) Uani 1 1 d . C2 C 0.3009(3) 0.50281(14) 0.8986(2) 0.0461(6) Uani 1 1 d . C3 C 0.2452(3) 0.43096(14) 0.8566(3) 0.0571(7) Uani 1 1 d . H3 H 0.2636 0.4118 0.7748 0.069 Uiso 1 1 calc R C4 C 0.1629(3) 0.38918(16) 0.9380(3) 0.0645(8) Uani 1 1 d . H4 H 0.1261 0.3412 0.9105 0.077 Uiso 1 1 calc R C5 C 0.1328(3) 0.41661(17) 1.0607(3) 0.0646(8) Uani 1 1 d . H5 H 0.0776 0.3866 1.1139 0.077 Uiso 1 1 calc R C6 C 0.1835(3) 0.48737(16) 1.1041(3) 0.0590(7) Uani 1 1 d . H6 H 0.1624 0.5065 1.1851 0.071 Uiso 1 1 calc R C7 C 0.2673(3) 0.52890(14) 1.0220(2) 0.0494(6) Uani 1 1 d . C8 C 0.4018(3) 0.62068(14) 0.9357(2) 0.0537(7) Uani 1 1 d . H8 H 0.4530 0.6665 0.9259 0.064 Uiso 1 1 calc R C9 C 0.4512(3) 0.55896(14) 0.7208(3) 0.0497(6) Uani 1 1 d . C10 C 0.5302(3) 0.62970(15) 0.6692(3) 0.0517(7) Uani 1 1 d . C11 C 0.6515(3) 0.67834(15) 0.4834(3) 0.0595(7) Uani 1 1 d . H11A H 0.6335 0.7263 0.5261 0.071 Uiso 1 1 calc R H11B H 0.5993 0.6810 0.3930 0.071 Uiso 1 1 calc R C12 C 0.8246(3) 0.66962(15) 0.4797(2) 0.0540(7) Uani 1 1 d . C13 C 0.8962(3) 0.71537(16) 0.3953(3) 0.0684(8) Uani 1 1 d . H13 H 0.8360 0.7492 0.3396 0.082 Uiso 1 1 calc R C14 C 1.0556(4) 0.7117(2) 0.3923(4) 0.0953(11) Uani 1 1 d . H14 H 1.1028 0.7437 0.3364 0.114 Uiso 1 1 calc R C15 C 1.1433(4) 0.6615(3) 0.4708(4) 0.1306(17) Uani 1 1 d . H15 H 1.2508 0.6585 0.4687 0.157 Uiso 1 1 calc R C16 C 1.0729(5) 0.6152(4) 0.5535(4) 0.162(2) Uani 1 1 d . H16 H 1.1332 0.5805 0.6072 0.195 Uiso 1 1 calc R C17 C 0.9141(4) 0.6193(2) 0.5582(3) 0.1033(13) Uani 1 1 d . H17 H 0.8679 0.5876 0.6151 0.124 Uiso 1 1 calc R C18 C 0.3240(4) 0.64783(17) 1.1597(3) 0.0818(10) Uani 1 1 d . H18A H 0.3813 0.6942 1.1527 0.123 Uiso 1 1 calc R H18B H 0.3693 0.6202 1.2366 0.123 Uiso 1 1 calc R H18C H 0.2166 0.6596 1.1674 0.123 Uiso 1 1 calc R N1 N 0.3312(2) 0.60158(12) 1.0413(2) 0.0558(6) Uani 1 1 d . N2 N 0.5798(2) 0.61818(12) 0.5517(2) 0.0556(6) Uani 1 1 d . O1 O 0.4432(2) 0.50143(10) 0.65099(17) 0.0664(6) Uani 1 1 d . O2 O 0.5411(2) 0.69032(10) 0.72980(18) 0.0748(6) Uani 1 1 d . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 C1 0.0471(14) 0.0495(15) 0.0427(14) -0.0025(12) 0.0036(11) 0.0060(11) C2 0.0466(13) 0.0477(15) 0.0425(14) 0.0012(12) 0.0009(10) 0.0060(12) C3 0.0661(17) 0.0562(17) 0.0488(15) -0.0034(13) 0.0067(13) 0.0001(14) C4 0.0753(19) 0.0555(17) 0.0626(19) 0.0026(15) 0.0091(15) -0.0075(14) C5 0.0660(18) 0.0649(19) 0.0637(19) 0.0153(15) 0.0122(14) 0.0015(15) C6 0.0627(16) 0.0665(19) 0.0485(15) 0.0035(14) 0.0101(13) 0.0102(14) C7 0.0490(14) 0.0507(16) 0.0471(15) 0.0013(12) 0.0012(11) 0.0098(12) C8 0.0561(15) 0.0534(16) 0.0512(16) 0.0004(13) 0.0060(12) 0.0001(13) C9 0.0495(14) 0.0474(15) 0.0512(16) -0.0026(13) 0.0026(12) 0.0011(12) C10 0.0515(15) 0.0495(16) 0.0524(16) 0.0010(13) 0.0002(12) 0.0011(12) C11 0.0597(16) 0.0612(17) 0.0581(16) 0.0076(14) 0.0101(13) 0.0022(13) C12 0.0528(15) 0.0664(18) 0.0429(14) -0.0099(13) 0.0065(12) -0.0026(13) C13 0.0696(19) 0.0647(18) 0.075(2) -0.0108(16) 0.0232(15) -0.0058(15) C14 0.077(2) 0.123(3) 0.092(3) -0.025(2) 0.033(2) -0.021(2) C15 0.050(2) 0.247(6) 0.095(3) -0.004(3) 0.012(2) 0.008(3) C16 0.074(3) 0.306(7) 0.104(3) 0.068(4) 0.000(2) 0.047(4) C17 0.059(2) 0.172(4) 0.078(2) 0.040(2) 0.0072(17) 0.025(2) C18 0.118(3) 0.073(2) 0.0574(18) -0.0233(16) 0.0219(17) -0.0012(18) N1 0.0649(14) 0.0542(14) 0.0484(13) -0.0072(11) 0.0079(11) 0.0048(11) N2 0.0591(13) 0.0594(14) 0.0504(13) 0.0036(11) 0.0157(10) -0.0015(10) O1 0.0899(14) 0.0553(11) 0.0575(11) -0.0137(10) 0.0233(10) -0.0093(10) O2 0.1099(17) 0.0517(12) 0.0662(13) -0.0125(10) 0.0237(11) -0.0118(11) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C8 C1 C9 127.6(2) C8 C1 C2 106.4(2) C9 C1 C2 125.9(2) C3 C2 C7 117.8(2) C3 C2 C1 135.4(2) C7 C2 C1 106.7(2) C4 C3 C2 118.9(2) C4 C3 H3 120.6 C2 C3 H3 120.6 C3 C4 C5 121.8(3) C3 C4 H4 119.1 C5 C4 H4 119.1 C6 C5 C4 120.9(3) C6 C5 H5 119.6 C4 C5 H5 119.6 C5 C6 C7 117.0(3) C5 C6 H6 121.5 C7 C6 H6 121.5 C6 C7 N1 128.8(2) C6 C7 C2 123.6(2) N1 C7 C2 107.6(2) N1 C8 C1 110.2(2) N1 C8 H8 124.9 C1 C8 H8 124.9 O1 C9 C1 122.5(2) O1 C9 C10 117.4(2) C1 C9 C10 120.1(2) O2 C10 N2 124.6(2) O2 C10 C9 122.5(2) N2 C10 C9 112.9(2) N2 C11 C12 115.1(2) N2 C11 H11A 108.5 C12 C11 H11A 108.5 N2 C11 H11B 108.5 C12 C11 H11B 108.5 H11A C11 H11B 107.5 C17 C12 C13 118.6(3) C17 C12 C11 122.5(3) C13 C12 C11 118.8(2) C12 C13 C14 121.0(3) C12 C13 H13 119.5 C14 C13 H13 119.5 C15 C14 C13 119.8(4) C15 C14 H14 120.1 C13 C14 H14 120.1 C14 C15 C16 119.7(4) C14 C15 H15 120.2 C16 C15 H15 120.2 C15 C16 C17 120.8(4) C15 C16 H16 119.6 C17 C16 H16 119.6 C12 C17 C16 120.2(4) C12 C17 H17 119.9 C16 C17 H17 119.9 N1 C18 H18A 109.5 N1 C18 H18B 109.5 H18A C18 H18B 109.5 N1 C18 H18C 109.5 H18A C18 H18C 109.5 H18B C18 H18C 109.5 C8 N1 C7 109.1(2) C8 N1 C18 126.3(2) C7 N1 C18 124.6(2) C10 N2 C11 121.7(2) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance C1 C8 1.383(3) C1 C9 1.433(3) C1 C2 1.438(3) C2 C3 1.398(3) C2 C7 1.402(3) C3 C4 1.372(3) C3 H3 0.9300 C4 C5 1.394(4) C4 H4 0.9300 C5 C6 1.372(4) C5 H5 0.9300 C6 C7 1.381(4) C6 H6 0.9300 C7 N1 1.395(3) C8 N1 1.345(3) C8 H8 0.9300 C9 O1 1.233(3) C9 C10 1.542(3) C10 O2 1.229(3) C10 N2 1.337(3) C11 N2 1.448(3) C11 C12 1.502(3) C11 H11A 0.9700 C11 H11B 0.9700 C12 C17 1.361(4) C12 C13 1.380(4) C13 C14 1.378(4) C13 H13 0.9300 C14 C15 1.351(5) C14 H14 0.9300 C15 C16 1.369(6) C15 H15 0.9300 C16 C17 1.375(5) C16 H16 0.9300 C17 H17 0.9300 C18 N1 1.461(3) C18 H18A 0.9600 C18 H18B 0.9600 C18 H18C 0.9600 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C8 C1 C2 C3 178.6(3) C9 C1 C2 C3 -4.3(4) C8 C1 C2 C7 0.2(2) C9 C1 C2 C7 177.3(2) C7 C2 C3 C4 -0.9(3) C1 C2 C3 C4 -179.2(2) C2 C3 C4 C5 0.4(4) C3 C4 C5 C6 0.7(4) C4 C5 C6 C7 -1.1(4) C5 C6 C7 N1 179.7(2) C5 C6 C7 C2 0.6(3) C3 C2 C7 C6 0.5(3) C1 C2 C7 C6 179.2(2) C3 C2 C7 N1 -178.8(2) C1 C2 C7 N1 -0.1(2) C9 C1 C8 N1 -177.3(2) C2 C1 C8 N1 -0.2(3) C8 C1 C9 O1 173.4(2) C2 C1 C9 O1 -3.1(4) C8 C1 C9 C10 -8.2(4) C2 C1 C9 C10 175.2(2) O1 C9 C10 O2 178.4(2) C1 C9 C10 O2 0.0(3) O1 C9 C10 N2 0.3(3) C1 C9 C10 N2 -178.2(2) N2 C11 C12 C17 -14.0(4) N2 C11 C12 C13 167.3(2) C17 C12 C13 C14 -1.5(4) C11 C12 C13 C14 177.3(3) C12 C13 C14 C15 1.5(5) C13 C14 C15 C16 -0.5(7) C14 C15 C16 C17 -0.3(8) C13 C12 C17 C16 0.6(5) C11 C12 C17 C16 -178.1(4) C15 C16 C17 C12 0.3(8) C1 C8 N1 C7 0.1(3) C1 C8 N1 C18 178.9(2) C6 C7 N1 C8 -179.2(2) C2 C7 N1 C8 0.0(3) C6 C7 N1 C18 1.9(4) C2 C7 N1 C18 -178.8(2) O2 C10 N2 C11 -0.6(4) C9 C10 N2 C11 177.5(2) C12 C11 N2 C10 108.9(3)