#------------------------------------------------------------------------------ #$Date: 2014-06-02 21:49:10 +0300 (Mon, 02 Jun 2014) $ #$Revision: 115083 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/11/34/7113473.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7113473 loop_ _publ_author_name 'Zhang, Lin-Ping' 'Lu, Wen-Jie' 'Mak, Thomas C. W.' _publ_section_title ; Controlled crystallization of mixed-ligand complexes of 1,3-bis(4-pyridyl)propane-N,N?-dioxide with metal(ii) thiocyanates: isostructurality in coordination networks bearing different mono- and di-nuclear nodesDedicated to Professor Khi-Rui Tsai (also known as Cai Qirui) on the occasion of his 90th birthday.Electronic supplementary information (ESI) available: synthesis of compounds 1?8, TGA analysis results of 1 and 5, and structural details with additional figures. See http://www.rsc.org/suppdata/cc/b3/b307604k/ ; _journal_issue 22 _journal_name_full 'Chemical Communications' _journal_page_first 2830 _journal_paper_doi 10.1039/b307604k _journal_year 2003 _chemical_formula_sum 'C15 H16 Cd N4 O3 S2' _chemical_formula_weight 476.84 _chemical_name_systematic ; ? ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 91.079(2) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 15.3748(15) _cell_length_b 14.9260(15) _cell_length_c 8.1696(8) _cell_measurement_temperature 293(2) _cell_volume 1874.5(3) _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.995 _diffrn_measured_fraction_theta_max 0.995 _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0289 _diffrn_reflns_av_sigmaI/netI 0.0284 _diffrn_reflns_limit_h_max 19 _diffrn_reflns_limit_h_min -20 _diffrn_reflns_limit_k_max 19 _diffrn_reflns_limit_k_min -13 _diffrn_reflns_limit_l_max 10 _diffrn_reflns_limit_l_min -10 _diffrn_reflns_number 12357 _diffrn_reflns_theta_full 28.01 _diffrn_reflns_theta_max 28.01 _diffrn_reflns_theta_min 1.32 _exptl_absorpt_coefficient_mu 1.409 _exptl_absorpt_correction_T_max 1.0000 _exptl_absorpt_correction_T_min 0.7250 _exptl_absorpt_correction_type SADABS _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.690 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 952 _exptl_crystal_size_max 0.32 _exptl_crystal_size_mid 0.31 _exptl_crystal_size_min 0.31 _refine_diff_density_max 0.849 _refine_diff_density_min -0.712 _refine_diff_density_rms 0.109 _refine_ls_extinction_coef 0.0005(3) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_extinction_method SHELXL _refine_ls_goodness_of_fit_ref 1.011 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 235 _refine_ls_number_reflns 4514 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.011 _refine_ls_R_factor_all 0.0398 _refine_ls_R_factor_gt 0.0326 _refine_ls_shift/su_max 0.002 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0561P)^2^+0.0000P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0842 _refine_ls_wR_factor_ref 0.0877 _reflns_number_gt 3785 _reflns_number_total 4514 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file b307604k.txt _[local]_cod_data_source_block compd2 _[local]_cod_cif_authors_sg_H-M P2(1)/c _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /usr/data/users/saulius/automatic-downloads/retrospective/RSC/lib/dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26. Automatic conversion script Id: cif_fix_values 2281 2013-09-26 08:29:07Z andrius ; _cod_database_code 7113473 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags Cd1 Cd -0.080164(11) 0.521147(13) 0.17408(2) 0.03500(9) Uani 1 1 d . S1 S 0.02834(6) 0.63951(5) 0.70685(10) 0.0589(2) Uani 1 1 d . O1 O 0.06079(11) 0.54105(14) 0.0836(2) 0.0424(4) Uani 1 1 d . O2 O 0.80442(13) 0.78714(14) 0.2710(3) 0.0545(5) Uani 1 1 d . N1 N 0.12468(12) 0.56843(14) 0.1865(2) 0.0325(4) Uani 1 1 d . N2 N 0.72849(13) 0.76292(16) 0.3315(3) 0.0418(5) Uani 1 1 d . C1 C 0.13750(18) 0.65628(19) 0.2051(4) 0.0456(6) Uani 1 1 d . H1A H 0.1030 0.6969 0.1470 0.055 Uiso 1 1 calc R C2 C 0.20227(19) 0.6866(2) 0.3109(4) 0.0531(7) Uani 1 1 d . H2A H 0.2113 0.7479 0.3234 0.064 Uiso 1 1 calc R C3 C 0.25339(17) 0.6271(2) 0.3978(3) 0.0499(7) Uani 1 1 d . C4 C 0.23658(19) 0.5368(2) 0.3749(4) 0.0533(8) Uani 1 1 d . H4A H 0.2698 0.4949 0.4324 0.064 Uiso 1 1 calc R C5 C 0.17206(19) 0.5078(2) 0.2691(4) 0.0447(6) Uani 1 1 d . H5A H 0.1615 0.4469 0.2552 0.054 Uiso 1 1 calc R C6 C 0.32644(19) 0.6575(3) 0.5105(4) 0.0745(12) Uani 1 1 d . H6A H 0.3336 0.6144 0.5986 0.089 Uiso 1 1 calc R H6B H 0.3108 0.7146 0.5588 0.089 Uiso 1 1 calc R C7 C 0.41228(17) 0.6678(3) 0.4240(4) 0.0537(8) Uani 1 1 d . H7A H 0.4072 0.7150 0.3429 0.064 Uiso 1 1 calc R H7B H 0.4258 0.6125 0.3675 0.064 Uiso 1 1 calc R C8 C 0.48567(18) 0.6901(3) 0.5444(4) 0.0738(12) Uani 1 1 d . H8A H 0.4674 0.7394 0.6129 0.089 Uiso 1 1 calc R H8B H 0.4958 0.6387 0.6150 0.089 Uiso 1 1 calc R C9 C 0.57043(17) 0.7151(3) 0.4651(4) 0.0525(8) Uani 1 1 d . C10 C 0.59706(19) 0.8029(3) 0.4562(4) 0.0607(9) Uani 1 1 d . H10A H 0.5616 0.8477 0.4973 0.073 Uiso 1 1 calc R C11 C 0.67445(19) 0.8256(2) 0.3883(4) 0.0568(8) Uani 1 1 d . H11A H 0.6900 0.8857 0.3813 0.068 Uiso 1 1 calc R C12 C 0.7045(2) 0.6769(2) 0.3355(4) 0.0585(8) Uani 1 1 d . H12A H 0.7411 0.6330 0.2942 0.070 Uiso 1 1 calc R C13 C 0.6256(2) 0.6529(2) 0.4010(5) 0.0640(9) Uani 1 1 d . H13A H 0.6095 0.5928 0.4014 0.077 Uiso 1 1 calc R O1W O -0.11153(16) 0.66277(16) 0.0718(3) 0.0539(6) Uani 1 1 d . H1WA H -0.117(2) 0.679(2) -0.028(5) 0.056(10) Uiso 1 1 d . H1WB H -0.136(2) 0.693(3) 0.122(5) 0.058(12) Uiso 1 1 d . C14 C -0.01773(19) 0.61183(17) 0.5315(3) 0.0406(6) Uani 1 1 d . C15 C -0.28843(19) 0.4641(2) 0.1059(4) 0.0468(7) Uani 1 1 d . N4 N -0.22077(17) 0.4825(2) 0.1543(4) 0.0590(7) Uani 1 1 d . S2 S -0.38639(7) 0.44188(10) 0.04237(17) 0.0993(4) Uani 1 1 d . N3 N -0.05259(18) 0.59280(17) 0.4112(3) 0.0533(6) Uani 1 1 d . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Cd1 0.02616(11) 0.04545(14) 0.03331(12) -0.00459(7) -0.00154(7) -0.00009(7) S1 0.0838(6) 0.0398(4) 0.0520(5) -0.0014(3) -0.0252(4) -0.0073(4) O1 0.0241(8) 0.0631(12) 0.0399(10) -0.0159(9) -0.0044(7) -0.0051(8) O2 0.0402(10) 0.0572(12) 0.0667(14) -0.0069(11) 0.0151(9) -0.0059(10) N1 0.0232(9) 0.0415(11) 0.0328(10) -0.0070(9) -0.0017(7) -0.0024(9) N2 0.0321(11) 0.0467(13) 0.0465(13) -0.0062(10) 0.0003(9) -0.0013(10) C1 0.0441(15) 0.0383(14) 0.0540(17) -0.0042(12) -0.0076(12) 0.0035(12) C2 0.0500(16) 0.0493(16) 0.0598(19) -0.0144(14) -0.0006(14) -0.0115(14) C3 0.0310(13) 0.085(2) 0.0335(14) -0.0059(14) 0.0002(10) -0.0174(14) C4 0.0362(15) 0.069(2) 0.0545(19) 0.0168(15) -0.0139(13) -0.0016(14) C5 0.0372(15) 0.0414(14) 0.0553(18) 0.0039(12) -0.0033(12) -0.0001(11) C6 0.0384(16) 0.143(4) 0.0415(17) -0.017(2) -0.0020(13) -0.035(2) C7 0.0336(13) 0.089(2) 0.0389(15) -0.0066(15) -0.0044(11) -0.0151(15) C8 0.0344(15) 0.143(4) 0.0437(17) -0.004(2) -0.0042(12) -0.0266(19) C9 0.0293(13) 0.089(2) 0.0393(15) -0.0026(15) -0.0068(11) -0.0074(14) C10 0.0344(14) 0.075(2) 0.072(2) -0.0232(18) 0.0016(14) 0.0061(15) C11 0.0449(16) 0.0505(17) 0.075(2) -0.0161(16) 0.0036(15) 0.0008(14) C12 0.0456(16) 0.0465(16) 0.084(3) -0.0072(16) 0.0112(15) 0.0021(14) C13 0.0532(19) 0.0575(19) 0.082(3) 0.0033(17) 0.0056(17) -0.0131(16) O1W 0.0711(15) 0.0517(13) 0.0390(12) 0.0008(10) 0.0049(11) 0.0185(11) C14 0.0496(15) 0.0332(12) 0.0391(14) 0.0014(11) 0.0028(11) 0.0029(12) C15 0.0370(15) 0.0503(16) 0.0531(17) 0.0044(13) 0.0025(12) -0.0084(12) N4 0.0346(14) 0.0737(19) 0.0687(19) -0.0009(14) 0.0035(12) -0.0073(12) S2 0.0556(6) 0.1219(10) 0.1190(10) 0.0315(8) -0.0354(6) -0.0388(6) N3 0.0705(17) 0.0515(14) 0.0374(13) -0.0042(11) -0.0114(12) 0.0078(13) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cd Cd -0.8075 1.2024 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 N4 Cd1 N3 110.55(11) . . N4 Cd1 O1W 90.85(10) . . N3 Cd1 O1W 84.91(9) . . N4 Cd1 O1 156.21(9) . . N3 Cd1 O1 92.96(9) . . O1W Cd1 O1 87.58(8) . . N4 Cd1 O1 88.38(9) . 3_565 N3 Cd1 O1 161.03(9) . 3_565 O1W Cd1 O1 93.84(8) . 3_565 O1 Cd1 O1 68.07(7) . 3_565 N4 Cd1 S1 94.31(8) . 3_566 N3 Cd1 S1 93.58(7) . 3_566 O1W Cd1 S1 174.83(7) . 3_566 O1 Cd1 S1 87.56(6) . 3_566 O1 Cd1 S1 85.97(6) 3_565 3_566 C14 S1 Cd1 102.16(9) . 3_566 N1 O1 Cd1 120.99(14) . . N1 O1 Cd1 125.68(13) . 3_565 Cd1 O1 Cd1 111.93(7) . 3_565 C1 N1 C5 122.0(2) . . C1 N1 O1 118.3(2) . . C5 N1 O1 119.7(2) . . O2 N2 C12 121.0(2) . . O2 N2 C11 119.7(2) . . C12 N2 C11 119.3(2) . . N1 C1 C2 119.7(3) . . C3 C2 C1 120.6(3) . . C2 C3 C4 117.1(3) . . C2 C3 C6 122.2(3) . . C4 C3 C6 120.7(3) . . C5 C4 C3 121.5(3) . . N1 C5 C4 119.0(3) . . C3 C6 C7 113.0(2) . . C6 C7 C8 111.2(3) . . C9 C8 C7 114.3(3) . . C13 C9 C10 116.1(3) . . C13 C9 C8 122.7(3) . . C10 C9 C8 121.2(3) . . C11 C10 C9 121.4(3) . . N2 C11 C10 121.2(3) . . N2 C12 C13 120.2(3) . . C9 C13 C12 121.8(3) . . N3 C14 S1 177.7(3) . . N4 C15 S2 177.2(3) . . C15 N4 Cd1 163.8(3) . . C14 N3 Cd1 159.2(2) . . loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 Cd1 N4 2.240(3) . Cd1 N3 2.246(2) . Cd1 O1W 2.320(2) . Cd1 O1 2.3220(18) . Cd1 O1 2.3250(18) 3_565 Cd1 S1 2.7022(8) 3_566 S1 C14 1.639(3) . S1 Cd1 2.7022(8) 3_566 O1 N1 1.345(2) . O1 Cd1 2.3250(18) 3_565 O2 N2 1.326(3) . N1 C1 1.334(3) . N1 C5 1.336(3) . N2 C12 1.337(4) . N2 C11 1.340(4) . C1 C2 1.383(4) . C2 C3 1.375(5) . C3 C4 1.384(5) . C3 C6 1.509(4) . C4 C5 1.373(4) . C6 C7 1.516(4) . C7 C8 1.520(4) . C8 C9 1.513(4) . C9 C13 1.369(5) . C9 C10 1.375(5) . C10 C11 1.365(4) . C12 C13 1.383(4) . C14 N3 1.146(3) . C15 N4 1.140(4) . C15 S2 1.618(3) . loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A O1W H1WA O2 0.86(4) 2.08(4) 2.854(3) 150(3) 4_475 O1W H1WB O2 0.72(4) 2.08(4) 2.801(3) 174(4) 1_455 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_4 N4 Cd1 O1 N1 -175.7(2) . . N3 Cd1 O1 N1 12.91(19) . . O1W Cd1 O1 N1 97.68(19) . . O1 Cd1 O1 N1 -167.2(2) 3_565 . S1 Cd1 O1 N1 -80.56(18) 3_566 . N4 Cd1 O1 Cd1 -8.5(3) . 3_565 N3 Cd1 O1 Cd1 -179.90(10) . 3_565 O1W Cd1 O1 Cd1 -95.12(10) . 3_565 O1 Cd1 O1 Cd1 0.0 3_565 3_565 S1 Cd1 O1 Cd1 86.63(8) 3_566 3_565 Cd1 O1 N1 C1 -88.7(3) . . Cd1 O1 N1 C1 106.0(2) 3_565 . Cd1 O1 N1 C5 90.1(2) . . Cd1 O1 N1 C5 -75.2(3) 3_565 . C5 N1 C1 C2 0.8(4) . . O1 N1 C1 C2 179.5(2) . . N1 C1 C2 C3 -0.3(5) . . C1 C2 C3 C4 -0.4(5) . . C1 C2 C3 C6 178.1(3) . . C2 C3 C4 C5 0.4(5) . . C6 C3 C4 C5 -178.1(3) . . C1 N1 C5 C4 -0.8(4) . . O1 N1 C5 C4 -179.4(3) . . C3 C4 C5 N1 0.1(5) . . C2 C3 C6 C7 -88.6(4) . . C4 C3 C6 C7 89.8(4) . . C3 C6 C7 C8 -174.8(4) . . C6 C7 C8 C9 -171.1(4) . . C7 C8 C9 C13 -77.8(5) . . C7 C8 C9 C10 103.3(4) . . C13 C9 C10 C11 -0.5(5) . . C8 C9 C10 C11 178.4(3) . . O2 N2 C11 C10 -177.8(3) . . C12 N2 C11 C10 2.7(5) . . C9 C10 C11 N2 -1.7(5) . . O2 N2 C12 C13 179.2(3) . . C11 N2 C12 C13 -1.4(5) . . C10 C9 C13 C12 1.8(5) . . C8 C9 C13 C12 -177.1(3) . . N2 C12 C13 C9 -0.9(6) . . Cd1 S1 C14 N3 102(7) 3_566 . S2 C15 N4 Cd1 -125(6) . . N3 Cd1 N4 C15 153.4(10) . . O1W Cd1 N4 C15 68.5(10) . . O1 Cd1 N4 C15 -17.4(11) . . O1 Cd1 N4 C15 -25.3(10) 3_565 . S1 Cd1 N4 C15 -111.1(10) 3_566 . S1 C14 N3 Cd1 -141(6) . . N4 Cd1 N3 C14 134.4(7) . . O1W Cd1 N3 C14 -136.6(7) . . O1 Cd1 N3 C14 -49.3(7) . . O1 Cd1 N3 C14 -49.6(8) 3_565 . S1 Cd1 N3 C14 38.5(7) 3_566 .