#------------------------------------------------------------------------------ #$Date: 2018-01-12 03:59:47 +0200 (Fri, 12 Jan 2018) $ #$Revision: 205099 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/12/11/7121133.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7121133 loop_ _publ_author_name 'Mahato, Karuna' 'Arora, Neha' 'Ray Bagdi, Prasanta' 'Gattu, Radhakrishna' 'Ghosh, Siddhartha Sankar' 'Khan, Abu Taleb' _publ_section_title ; Oxidative Cross Coupling Reaction of 4-Hydroxydithiocoumarin and Amines/Thiols Using a Combination of I2 and TBHP: Access to Lead Molecules for Bio-medical Applications ; _journal_name_full 'Chemical Communications' _journal_paper_doi 10.1039/C7CC08502H _journal_year 2018 _chemical_compound_source synthesis _chemical_formula_moiety 'C16 H13 N O3 S2' _chemical_formula_sum 'C16 H13 N O3 S2' _chemical_formula_weight 331.39 _chemical_name_systematic km-t-ba-so _space_group_IT_number 4 _symmetry_cell_setting monoclinic _symmetry_Int_Tables_number 4 _symmetry_space_group_name_Hall 'P 2yb' _symmetry_space_group_name_H-M 'P 1 21 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _audit_update_record ; 2017-11-01 deposited with the CCDC. 2018-01-11 downloaded from the CCDC. ; _cell_angle_alpha 90.00 _cell_angle_beta 102.459(7) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 10.3912(7) _cell_length_b 5.6999(3) _cell_length_c 12.8081(9) _cell_measurement_reflns_used 3207 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 24.99 _cell_measurement_theta_min 3.26 _cell_volume 740.74(8) _computing_cell_refinement 'CrysAlisPro, Agilent Technologies' _computing_data_collection 'CrysAlisPro, Agilent Technologies' _computing_data_reduction 'CrysAlisPro, Agilent Technologies' _computing_molecular_graphics 'Brucker SHELXTL' _computing_publication_material 'Brucker SHELXTL' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.996 _diffrn_measured_fraction_theta_max 0.996 _diffrn_measurement_device_type 'CCD area detector' _diffrn_measurement_method 'phi and omega scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_probe x-ray _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0248 _diffrn_reflns_av_sigmaI/netI 0.0646 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min -12 _diffrn_reflns_limit_k_max 6 _diffrn_reflns_limit_k_min -6 _diffrn_reflns_limit_l_max 10 _diffrn_reflns_limit_l_min -15 _diffrn_reflns_number 2827 _diffrn_reflns_theta_full 24.99 _diffrn_reflns_theta_max 24.99 _diffrn_reflns_theta_min 3.26 _diffrn_source 'fine-focus sealed tube' _exptl_absorpt_coefficient_mu 0.371 _exptl_absorpt_correction_T_max 0.898 _exptl_absorpt_correction_T_min 0.878 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details SADABS _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.486 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 344 _exptl_crystal_size_max 0.35 _exptl_crystal_size_mid 0.31 _exptl_crystal_size_min 0.29 _refine_diff_density_max 0.228 _refine_diff_density_min -0.221 _refine_diff_density_rms 0.052 _refine_ls_abs_structure_details 'Flack H D (1983), Acta Cryst. A39, 876-881' _refine_ls_abs_structure_Flack -0.13(11) _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.114 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 199 _refine_ls_number_reflns 2197 _refine_ls_number_restraints 1 _refine_ls_restrained_S_all 1.113 _refine_ls_R_factor_all 0.0592 _refine_ls_R_factor_gt 0.0464 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0192P)^2^+0.1528P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0823 _refine_ls_wR_factor_ref 0.0948 _reflns_number_gt 1878 _reflns_number_total 2197 _reflns_threshold_expression >2sigma(I) _cod_data_source_file c7cc08502h2.cif _cod_data_source_block kmtbaso _cod_depositor_comments ; The following automatic conversions were performed: '_exptl_absorpt_correction_type' value 'MULTI-SCAN' changed to 'multi-scan' according to /home/data/users/saulius/crontab/automatic-downloads/rss-feeds/RSC/lib/dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26. Automatic conversion script Id: cif_fix_values 4973 2017-02-22 13:04:09Z antanas ; _cod_original_cell_volume 740.75(8) _cod_original_sg_symbol_H-M 'P 21' _cod_database_code 7121133 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags S2 S 0.16061(12) 0.97975(18) 0.11571(9) 0.0417(3) Uani 1 1 d . S1 S 0.03749(11) 0.6117(2) 0.21997(10) 0.0436(3) Uani 1 1 d . O2 O 0.0238(3) 1.0431(5) 0.0891(3) 0.0543(10) Uani 1 1 d . O3 O 0.2610(3) 1.1523(5) 0.1474(3) 0.0574(10) Uani 1 1 d . O1 O 0.4355(3) 0.5569(6) 0.4301(3) 0.0649(11) Uani 1 1 d . N1 N 0.1894(3) 0.8399(6) 0.0150(3) 0.0421(10) Uani 1 1 d . H1 H 0.1305 0.8343 -0.0435 0.051 Uiso 1 1 calc R C2 C 0.2210(4) 0.3999(8) 0.3839(4) 0.0399(11) Uani 1 1 d . C8 C 0.2955(4) 0.7457(8) 0.2886(3) 0.0386(11) Uani 1 1 d . H8 H 0.3629 0.8477 0.2814 0.046 Uiso 1 1 calc R C7 C 0.3246(4) 0.5672(9) 0.3725(4) 0.0441(12) Uani 1 1 d . C6 C -0.0013(5) 0.2447(7) 0.3371(4) 0.0447(12) Uani 1 1 d . H6 H -0.0864 0.2509 0.2954 0.054 Uiso 1 1 calc R C11 C 0.3383(4) 0.6692(9) -0.0876(4) 0.0435(12) Uani 1 1 d . C4 C 0.1586(5) 0.0607(8) 0.4757(4) 0.0485(13) Uani 1 1 d . H4 H 0.1801 -0.0569 0.5268 0.058 Uiso 1 1 calc R C1 C 0.0930(4) 0.4077(7) 0.3215(3) 0.0355(11) Uani 1 1 d . C3 C 0.2524(5) 0.2199(8) 0.4611(4) 0.0458(12) Uani 1 1 d . H3 H 0.3376 0.2091 0.5024 0.055 Uiso 1 1 calc R C9 C 0.1787(4) 0.7717(7) 0.2217(3) 0.0359(10) Uani 1 1 d . C14 C 0.3737(6) 0.5792(13) -0.2926(4) 0.0736(19) Uani 1 1 d . H14 H 0.3862 0.5486 -0.3610 0.088 Uiso 1 1 calc R C15 C 0.4153(6) 0.7846(12) -0.2430(5) 0.0722(18) Uani 1 1 d . H15 H 0.4567 0.8959 -0.2775 0.087 Uiso 1 1 calc R C16 C 0.3963(5) 0.8285(10) -0.1417(4) 0.0584(15) Uani 1 1 d . H16 H 0.4240 0.9712 -0.1094 0.070 Uiso 1 1 calc R C13 C 0.3136(6) 0.4191(10) -0.2407(5) 0.0722(18) Uani 1 1 d . H13 H 0.2838 0.2789 -0.2746 0.087 Uiso 1 1 calc R C12 C 0.2958(5) 0.4605(9) -0.1387(4) 0.0580(14) Uani 1 1 d . H12 H 0.2552 0.3480 -0.1042 0.070 Uiso 1 1 calc R C10 C 0.3174(4) 0.7201(9) 0.0226(4) 0.0507(13) Uani 1 1 d . H10A H 0.3184 0.5746 0.0621 0.061 Uiso 1 1 calc R H10B H 0.3881 0.8189 0.0607 0.061 Uiso 1 1 calc R C5 C 0.0320(5) 0.0762(9) 0.4140(4) 0.0534(13) Uani 1 1 d . H5 H -0.0315 -0.0303 0.4250 0.064 Uiso 1 1 calc R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 S2 0.0448(7) 0.0339(6) 0.0464(7) 0.0005(6) 0.0102(5) 0.0027(6) S1 0.0350(6) 0.0443(7) 0.0488(7) 0.0023(6) 0.0034(5) -0.0025(6) O2 0.0453(19) 0.054(2) 0.063(2) 0.0072(18) 0.0105(16) 0.0164(16) O3 0.070(2) 0.0378(19) 0.063(2) -0.0003(18) 0.0125(18) -0.0159(17) O1 0.0423(19) 0.078(3) 0.065(2) 0.012(2) -0.0085(17) -0.0057(18) N1 0.036(2) 0.054(2) 0.034(2) 0.002(2) 0.0025(17) 0.0101(18) C2 0.042(3) 0.041(3) 0.037(3) -0.010(2) 0.009(2) 0.000(2) C8 0.033(2) 0.041(3) 0.040(3) 0.000(2) 0.004(2) -0.002(2) C7 0.039(3) 0.052(3) 0.039(3) -0.012(2) 0.005(2) 0.001(2) C6 0.048(3) 0.039(3) 0.048(3) -0.003(3) 0.010(2) -0.004(2) C11 0.032(3) 0.051(3) 0.048(3) 0.004(3) 0.010(2) 0.001(2) C4 0.062(3) 0.040(3) 0.046(3) 0.004(2) 0.017(3) 0.000(2) C1 0.038(3) 0.034(3) 0.034(2) -0.008(2) 0.006(2) -0.001(2) C3 0.050(3) 0.050(3) 0.035(3) -0.004(2) 0.005(2) 0.013(3) C9 0.043(3) 0.032(2) 0.034(2) -0.005(2) 0.012(2) 0.000(2) C14 0.066(4) 0.109(6) 0.049(3) -0.001(4) 0.019(3) 0.029(4) C15 0.061(4) 0.094(5) 0.070(4) 0.015(4) 0.033(3) 0.000(4) C16 0.058(3) 0.065(4) 0.055(4) -0.009(3) 0.019(3) -0.012(3) C13 0.089(5) 0.057(4) 0.066(4) -0.024(3) 0.005(4) 0.012(3) C12 0.061(3) 0.047(3) 0.067(4) 0.004(3) 0.018(3) 0.000(3) C10 0.043(3) 0.066(3) 0.043(3) 0.001(3) 0.009(2) 0.010(2) C5 0.064(3) 0.048(3) 0.053(3) 0.002(3) 0.021(3) -0.012(3) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle O3 S2 O2 121.3(2) O3 S2 N1 108.7(2) O2 S2 N1 106.4(2) O3 S2 C9 107.0(2) O2 S2 C9 106.5(2) N1 S2 C9 105.99(19) C9 S1 C1 101.5(2) C10 N1 S2 120.0(3) C1 C2 C3 118.1(4) C1 C2 C7 123.4(4) C3 C2 C7 118.5(4) C9 C8 C7 124.3(4) O1 C7 C8 119.5(4) O1 C7 C2 121.5(4) C8 C7 C2 119.0(4) C5 C6 C1 119.7(4) C16 C11 C12 117.7(5) C16 C11 C10 121.4(5) C12 C11 C10 121.0(5) C3 C4 C5 119.7(4) C6 C1 C2 120.5(4) C6 C1 S1 114.9(3) C2 C1 S1 124.6(3) C4 C3 C2 120.7(4) C8 C9 S1 127.1(4) C8 C9 S2 119.7(3) S1 C9 S2 113.1(2) C15 C14 C13 118.9(5) C14 C15 C16 120.1(6) C11 C16 C15 121.9(5) C14 C13 C12 121.3(5) C13 C12 C11 120.1(5) N1 C10 C11 109.7(4) C6 C5 C4 121.3(5) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance S2 O3 1.427(3) S2 O2 1.435(3) S2 N1 1.598(4) S2 C9 1.782(4) S1 C9 1.724(4) S1 C1 1.747(4) O1 C7 1.228(5) N1 C10 1.479(5) C2 C1 1.397(5) C2 C3 1.413(6) C2 C7 1.468(6) C8 C9 1.335(5) C8 C7 1.463(6) C6 C5 1.366(6) C6 C1 1.396(6) C11 C16 1.360(7) C11 C12 1.383(7) C11 C10 1.502(6) C4 C3 1.374(6) C4 C5 1.384(6) C14 C15 1.357(8) C14 C13 1.358(8) C15 C16 1.376(7) C13 C12 1.378(7)