#------------------------------------------------------------------------------ #$Date: 2012-02-26 23:34:47 +0200 (Sun, 26 Feb 2012) $ #$Revision: 35909 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/20/11/7201162.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7201162 loop_ _publ_author_name 'Nauha, Elisa' 'Saxell, Heidi' 'Nissinen, Maija' 'Kolehmainen, Erkki' 'Sch\"afer, Ansgar' 'Schlecker, Rainer' _publ_section_title ; Polymorphism and versatile solvate formation of thiophanate-methyl ; _journal_issue 11 _journal_name_full CrystEngComm _journal_page_first 2536 _journal_volume 11 _journal_year 2009 _chemical_formula_moiety 'C12 H14 N4 O4 S2, C2 H6 O1 S1' _chemical_formula_sum 'C14 H20 N4 O5 S3' _chemical_formula_weight 420.52 _chemical_name_common 'thiophanate-methyl, dimethylsulfoxide' _chemical_name_systematic ; ? ; _space_group_IT_number 15 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 1 2/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 94.66(3) _cell_angle_gamma 90.00 _cell_formula_units_Z 8 _cell_length_a 26.524(15) _cell_length_b 10.321(5) _cell_length_c 17.428(10) _cell_measurement_temperature 103(2) _cell_volume 4755(4) _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _diffrn_ambient_temperature 103(2) _diffrn_measured_fraction_theta_full 0.960 _diffrn_measured_fraction_theta_max 0.960 _diffrn_measurement_device_type 'Bruker AXS CCD Detector' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type CuK\a _diffrn_radiation_wavelength 1.54178 _diffrn_reflns_av_R_equivalents 0.1367 _diffrn_reflns_av_sigmaI/netI 0.1384 _diffrn_reflns_limit_h_max 28 _diffrn_reflns_limit_h_min -26 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 18 _diffrn_reflns_limit_l_min -18 _diffrn_reflns_number 12637 _diffrn_reflns_theta_full 57.88 _diffrn_reflns_theta_max 57.88 _diffrn_reflns_theta_min 3.34 _exptl_absorpt_coefficient_mu 3.094 _exptl_absorpt_correction_T_max 0.5765 _exptl_absorpt_correction_T_min 0.5765 _exptl_absorpt_correction_type empirical _exptl_absorpt_process_details 'R.H. Blessing, Acta Cryst. A 1995, 51, 33' _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.175 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 1760 _exptl_crystal_size_max 0.20 _exptl_crystal_size_mid 0.20 _exptl_crystal_size_min 0.20 _refine_diff_density_max 0.613 _refine_diff_density_min -0.722 _refine_diff_density_rms 0.120 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 0.988 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 239 _refine_ls_number_reflns 3184 _refine_ls_number_restraints 4 _refine_ls_restrained_S_all 0.989 _refine_ls_R_factor_all 0.1186 _refine_ls_R_factor_gt 0.0899 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.1267P)^2^+0.0000P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.2145 _refine_ls_wR_factor_ref 0.2250 _reflns_number_gt 1920 _reflns_number_total 3184 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file b905511h.txt _[local]_cod_data_source_block TM_DMSO _[local]_cod_cif_authors_sg_H-M C2/c _cod_original_cell_volume 4755(5) _cod_database_code 7201162 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z+1/2' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y, z-1/2' '-x+1/2, -y+1/2, -z' 'x+1/2, -y+1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group S1 S 0.42836(6) 0.49026(18) 0.44188(10) 0.0408(6) Uani 1 1 d . . . S2 S 0.31364(7) 0.08525(16) 0.27599(9) 0.0333(6) Uani 1 1 d . . . O1 O 0.53072(15) 0.2071(4) 0.3259(2) 0.0248(11) Uani 1 1 d . . . O2 O 0.58033(15) 0.2430(4) 0.4359(2) 0.0296(12) Uani 1 1 d . . . O3 O 0.32638(19) 0.3013(4) 0.5049(2) 0.0422(14) Uani 1 1 d . . . O4 O 0.30598(16) 0.1062(4) 0.5509(2) 0.0284(11) Uani 1 1 d . . . N1 N 0.50600(19) 0.3370(5) 0.4236(3) 0.0301(14) Uani 1 1 d D . . H1 H 0.5147 0.3604 0.4715 0.036 Uiso 1 1 calc RD . . N2 N 0.44549(18) 0.3487(5) 0.3195(3) 0.0237(13) Uani 1 1 d D . . H2 H 0.4633 0.2877 0.2991 0.028 Uiso 1 1 calc RD . . N3 N 0.34437(19) 0.2954(5) 0.3555(3) 0.0235(13) Uani 1 1 d D . . H3 H 0.3518 0.3322 0.4005 0.028 Uiso 1 1 calc RD . . N4 N 0.31652(18) 0.1216(5) 0.4261(3) 0.0235(13) Uani 1 1 d D . . H4 H 0.3096 0.0382 0.4271 0.028 Uiso 1 1 calc RD . . C1 C 0.6200(3) 0.1623(7) 0.4047(4) 0.042(2) Uani 1 1 d . . . H1A H 0.6067 0.0751 0.3937 0.063 Uiso 1 1 calc R . . H1B H 0.6493 0.1570 0.4425 0.063 Uiso 1 1 calc R . . H1C H 0.6302 0.2014 0.3571 0.063 Uiso 1 1 calc R . . C2 C 0.5387(2) 0.2552(6) 0.3897(4) 0.0244(16) Uani 1 1 d . . . C3 C 0.4602(2) 0.3870(6) 0.3899(3) 0.0252(16) Uani 1 1 d . . . C4 C 0.4032(2) 0.3982(6) 0.2744(3) 0.0198(15) Uani 1 1 d . . . C5 C 0.4116(2) 0.4743(6) 0.2104(3) 0.0252(16) Uani 1 1 d . . . H5 H 0.4450 0.5003 0.2017 0.030 Uiso 1 1 calc R . . C6 C 0.3717(2) 0.5119(6) 0.1595(4) 0.0261(16) Uani 1 1 d . . . H6 H 0.3780 0.5616 0.1155 0.031 Uiso 1 1 calc R . . C7 C 0.3227(3) 0.4782(6) 0.1720(3) 0.0290(17) Uani 1 1 d . . . H7 H 0.2955 0.5027 0.1362 0.035 Uiso 1 1 calc R . . C8 C 0.3139(2) 0.4080(5) 0.2376(3) 0.0214(15) Uani 1 1 d . . . H8 H 0.2801 0.3880 0.2478 0.026 Uiso 1 1 calc R . . C9 C 0.3533(2) 0.3671(5) 0.2880(3) 0.0175(15) Uani 1 1 d . . . C10 C 0.3251(2) 0.1736(6) 0.3541(3) 0.0252(16) Uani 1 1 d . . . C11 C 0.3176(2) 0.1851(8) 0.4950(4) 0.0328(18) Uani 1 1 d . . . C12 C 0.3052(3) 0.1617(7) 0.6257(3) 0.0375(19) Uani 1 1 d . . . H12A H 0.3391 0.1927 0.6432 0.056 Uiso 1 1 calc R . . H12B H 0.2945 0.0960 0.6617 0.056 Uiso 1 1 calc R . . H12C H 0.2814 0.2344 0.6238 0.056 Uiso 1 1 calc R . . S3 S 0.21162(7) 0.25734(16) 0.12081(10) 0.0385(6) Uani 1 1 d . . . O6 O 0.20235(17) 0.3603(4) 0.0607(2) 0.0362(12) Uani 1 1 d . . . C13 C 0.1543(3) 0.2388(7) 0.1640(4) 0.050(2) Uani 1 1 d . . . H13A H 0.1479 0.3166 0.1939 0.075 Uiso 1 1 calc R . . H13B H 0.1566 0.1633 0.1982 0.075 Uiso 1 1 calc R . . H13C H 0.1266 0.2262 0.1240 0.075 Uiso 1 1 calc R . . C14 C 0.2096(3) 0.1073(6) 0.0677(4) 0.054(2) Uani 1 1 d . . . H14A H 0.1771 0.1001 0.0370 0.082 Uiso 1 1 calc R . . H14B H 0.2134 0.0344 0.1038 0.082 Uiso 1 1 calc R . . H14C H 0.2371 0.1058 0.0335 0.082 Uiso 1 1 calc R . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 S1 0.0258(11) 0.0473(13) 0.0490(12) -0.0268(10) 0.0015(8) 0.0109(9) S2 0.0487(13) 0.0266(10) 0.0258(10) -0.0019(8) 0.0103(8) -0.0067(9) O1 0.020(3) 0.025(3) 0.031(3) -0.007(2) 0.0091(19) 0.006(2) O2 0.018(3) 0.037(3) 0.034(3) -0.009(2) 0.001(2) 0.012(2) O3 0.081(4) 0.017(3) 0.032(3) 0.001(2) 0.023(2) -0.012(3) O4 0.040(3) 0.023(3) 0.024(3) 0.004(2) 0.014(2) -0.003(2) N1 0.021(3) 0.043(4) 0.027(3) -0.015(3) 0.003(3) 0.005(3) N2 0.026(3) 0.024(3) 0.023(3) -0.011(3) 0.010(2) 0.008(2) N3 0.028(3) 0.025(3) 0.019(3) -0.003(3) 0.009(2) -0.002(3) N4 0.038(4) 0.021(3) 0.014(3) -0.004(3) 0.012(2) -0.003(2) C1 0.032(5) 0.051(5) 0.043(4) -0.018(4) 0.002(3) 0.024(4) C2 0.027(5) 0.020(4) 0.028(4) -0.005(3) 0.012(3) -0.003(3) C3 0.022(4) 0.030(4) 0.025(4) -0.011(3) 0.009(3) -0.002(3) C4 0.016(4) 0.024(4) 0.019(4) -0.005(3) 0.002(3) 0.007(3) C5 0.012(4) 0.026(4) 0.039(4) 0.002(3) 0.011(3) 0.005(3) C6 0.032(5) 0.016(4) 0.031(4) 0.001(3) 0.011(3) -0.002(3) C7 0.027(4) 0.034(4) 0.026(4) 0.004(3) 0.005(3) -0.004(3) C8 0.018(4) 0.017(4) 0.031(4) -0.004(3) 0.014(3) -0.001(3) C9 0.016(4) 0.019(4) 0.018(4) -0.003(3) 0.006(3) -0.001(3) C10 0.027(4) 0.033(4) 0.017(4) -0.005(3) 0.016(3) 0.005(3) C11 0.021(4) 0.050(5) 0.028(4) 0.023(4) 0.003(3) -0.003(4) C12 0.053(5) 0.039(5) 0.023(4) 0.002(4) 0.020(3) -0.003(4) S3 0.0362(12) 0.0302(11) 0.0490(12) 0.0089(9) 0.0025(9) -0.0055(9) O6 0.058(3) 0.022(3) 0.031(3) 0.004(2) 0.015(2) 0.002(2) C13 0.066(6) 0.039(5) 0.053(5) -0.011(4) 0.047(4) -0.009(4) C14 0.063(6) 0.022(4) 0.085(6) 0.002(4) 0.054(5) 0.015(4) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0181 0.0091 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0311 0.0180 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0492 0.0322 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.3331 0.5567 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag C2 O2 C1 114.4(5) . . ? C11 O4 C12 116.6(5) . . ? C2 N1 C3 126.8(5) . . ? C2 N1 H1 116.6 . . ? C3 N1 H1 116.6 . . ? C3 N2 C4 124.9(5) . . ? C3 N2 H2 117.6 . . ? C4 N2 H2 117.6 . . ? C10 N3 C9 123.7(5) . . ? C10 N3 H3 118.2 . . ? C9 N3 H3 118.2 . . ? C11 N4 C10 127.6(5) . . ? C11 N4 H4 116.2 . . ? C10 N4 H4 116.2 . . ? O2 C1 H1A 109.5 . . ? O2 C1 H1B 109.5 . . ? H1A C1 H1B 109.5 . . ? O2 C1 H1C 109.5 . . ? H1A C1 H1C 109.5 . . ? H1B C1 H1C 109.5 . . ? O1 C2 O2 126.3(6) . . ? O1 C2 N1 124.9(6) . . ? O2 C2 N1 108.8(6) . . ? N2 C3 N1 117.4(5) . . ? N2 C3 S1 124.8(5) . . ? N1 C3 S1 117.8(4) . . ? C5 C4 C9 118.6(5) . . ? C5 C4 N2 118.5(5) . . ? C9 C4 N2 122.8(5) . . ? C6 C5 C4 120.4(6) . . ? C6 C5 H5 119.8 . . ? C4 C5 H5 119.8 . . ? C7 C6 C5 120.8(6) . . ? C7 C6 H6 119.6 . . ? C5 C6 H6 119.6 . . ? C6 C7 C8 119.1(6) . . ? C6 C7 H7 120.5 . . ? C8 C7 H7 120.5 . . ? C9 C8 C7 120.9(6) . . ? C9 C8 H8 119.5 . . ? C7 C8 H8 119.5 . . ? C8 C9 C4 120.1(5) . . ? C8 C9 N3 121.1(5) . . ? C4 C9 N3 118.8(5) . . ? N3 C10 N4 115.4(5) . . ? N3 C10 S2 124.9(5) . . ? N4 C10 S2 119.7(5) . . ? O3 C11 O4 123.3(6) . . ? O3 C11 N4 125.4(6) . . ? O4 C11 N4 111.2(6) . . ? O4 C12 H12A 109.5 . . ? O4 C12 H12B 109.5 . . ? H12A C12 H12B 109.5 . . ? O4 C12 H12C 109.5 . . ? H12A C12 H12C 109.5 . . ? H12B C12 H12C 109.5 . . ? O6 S3 C13 106.1(3) . . ? O6 S3 C14 104.7(3) . . ? C13 S3 C14 97.8(3) . . ? S3 C13 H13A 109.5 . . ? S3 C13 H13B 109.5 . . ? H13A C13 H13B 109.5 . . ? S3 C13 H13C 109.5 . . ? H13A C13 H13C 109.5 . . ? H13B C13 H13C 109.5 . . ? S3 C14 H14A 109.5 . . ? S3 C14 H14B 109.5 . . ? H14A C14 H14B 109.5 . . ? S3 C14 H14C 109.5 . . ? H14A C14 H14C 109.5 . . ? H14B C14 H14C 109.5 . . ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag S1 C3 1.672(6) . ? S2 C10 1.647(6) . ? O1 C2 1.221(7) . ? O2 C2 1.319(7) . ? O2 C1 1.479(7) . ? O3 C11 1.232(8) . ? O4 C11 1.325(7) . ? O4 C12 1.426(7) . ? N1 C2 1.378(8) . ? N1 C3 1.404(8) . ? N1 H1 0.8800 . ? N2 C3 1.318(7) . ? N2 C4 1.411(7) . ? N2 H2 0.8800 . ? N3 C10 1.356(8) . ? N3 C9 1.425(7) . ? N3 H3 0.8800 . ? N4 C11 1.366(8) . ? N4 C10 1.400(7) . ? N4 H4 0.8800 . ? C1 H1A 0.9800 . ? C1 H1B 0.9800 . ? C1 H1C 0.9800 . ? C4 C5 1.397(8) . ? C4 C9 1.402(8) . ? C5 C6 1.381(8) . ? C5 H5 0.9500 . ? C6 C7 1.377(8) . ? C6 H6 0.9500 . ? C7 C8 1.390(8) . ? C7 H7 0.9500 . ? C8 C9 1.377(8) . ? C8 H8 0.9500 . ? C12 H12A 0.9800 . ? C12 H12B 0.9800 . ? C12 H12C 0.9800 . ? S3 O6 1.498(4) . ? S3 C13 1.760(7) . ? S3 C14 1.803(7) . ? C13 H13A 0.9800 . ? C13 H13B 0.9800 . ? C13 H13C 0.9800 . ? C14 H14A 0.9800 . ? C14 H14B 0.9800 . ? C14 H14C 0.9800 . ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A N2 H2 O1 0.88 1.99 2.687(6) 134.9 . N3 H3 O3 0.88 2.02 2.686(6) 132.1 . N3 H3 S1 0.88 2.66 3.276(5) 128.1 . N1 H1 S1 0.88 2.56 3.322(5) 145.0 5_666 N2 H2 O1 0.88 2.35 3.036(6) 135.0 2_655 N4 H4 O6 0.88 1.88 2.756(6) 174.4 4_545 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_2 _geom_torsion_site_symmetry_3 _geom_torsion_site_symmetry_4 _geom_torsion_publ_flag C1 O2 C2 O1 0.0(9) . . . . ? C1 O2 C2 N1 -177.1(5) . . . . ? C3 N1 C2 O1 -5.1(10) . . . . ? C3 N1 C2 O2 172.1(6) . . . . ? C4 N2 C3 N1 -173.7(5) . . . . ? C4 N2 C3 S1 6.5(9) . . . . ? C2 N1 C3 N2 2.9(9) . . . . ? C2 N1 C3 S1 -177.3(5) . . . . ? C3 N2 C4 C5 110.1(7) . . . . ? C3 N2 C4 C9 -74.4(8) . . . . ? C9 C4 C5 C6 -3.4(8) . . . . ? N2 C4 C5 C6 172.3(5) . . . . ? C4 C5 C6 C7 1.7(9) . . . . ? C5 C6 C7 C8 1.4(9) . . . . ? C6 C7 C8 C9 -2.9(9) . . . . ? C7 C8 C9 C4 1.2(8) . . . . ? C7 C8 C9 N3 179.8(5) . . . . ? C5 C4 C9 C8 1.9(8) . . . . ? N2 C4 C9 C8 -173.6(5) . . . . ? C5 C4 C9 N3 -176.7(5) . . . . ? N2 C4 C9 N3 7.8(8) . . . . ? C10 N3 C9 C8 66.9(8) . . . . ? C10 N3 C9 C4 -114.5(6) . . . . ? C9 N3 C10 N4 -176.7(5) . . . . ? C9 N3 C10 S2 5.4(8) . . . . ? C11 N4 C10 N3 11.3(9) . . . . ? C11 N4 C10 S2 -170.8(5) . . . . ? C12 O4 C11 O3 -1.4(9) . . . . ? C12 O4 C11 N4 -179.3(5) . . . . ? C10 N4 C11 O3 0.1(10) . . . . ? C10 N4 C11 O4 177.9(5) . . . . ?