#------------------------------------------------------------------------------ #$Date: 2014-06-07 12:13:08 +0300 (Sat, 07 Jun 2014) $ #$Revision: 116157 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/21/54/7215476.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7215476 loop_ _publ_author_name 'Adalder, Tapas Kumar' 'Dastidar, Parthasarathi' _publ_section_title ; The role of secondary ammonium cations in controlling the conformation of C3-symmetric acid moieties and its implication for the design of supramolecular capsules ; _journal_issue 22 _journal_name_full CrystEngComm _journal_page_first 4867 _journal_paper_doi 10.1039/c3ce42655f _journal_volume 16 _journal_year 2014 _chemical_formula_moiety 'C15 H17 O6, C6 H12 N' _chemical_formula_sum 'C21 H29 N O6' _chemical_formula_weight 391.46 _chemical_name_systematic ; ? ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 113.026(5) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 13.957(4) _cell_length_b 10.086(3) _cell_length_c 17.006(5) _cell_measurement_temperature 296(2) _cell_volume 2203.2(11) _computing_cell_refinement 'BRUKER APEX II' _computing_data_collection 'BRUKER APEX II' _computing_data_reduction 'BRUKER APEX II' _computing_molecular_graphics 'MERCURY 2.3, PLATON' _computing_publication_material 'MERCURY 2.3, PLATON' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 296(2) _diffrn_measured_fraction_theta_full 0.681 _diffrn_measured_fraction_theta_max 0.681 _diffrn_measurement_device_type 'BRUKER CCD AREA DETECTOR' _diffrn_measurement_method 'PHI-OMEGA SCAN' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0456 _diffrn_reflns_av_sigmaI/netI 0.0415 _diffrn_reflns_limit_h_max 16 _diffrn_reflns_limit_h_min -16 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 20 _diffrn_reflns_limit_l_min -20 _diffrn_reflns_number 11542 _diffrn_reflns_theta_full 25.00 _diffrn_reflns_theta_max 25.00 _diffrn_reflns_theta_min 1.59 _exptl_absorpt_coefficient_mu 0.085 _exptl_absorpt_correction_T_max 0.9815 _exptl_absorpt_correction_T_min 0.9708 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details SADABS _exptl_crystal_colour COLOURLESS _exptl_crystal_density_diffrn 1.156 _exptl_crystal_density_method 'not measured' _exptl_crystal_description BLOCK _exptl_crystal_F_000 808 _exptl_crystal_size_max 0.35 _exptl_crystal_size_mid 0.23 _exptl_crystal_size_min 0.22 _refine_diff_density_max 0.297 _refine_diff_density_min -0.273 _refine_diff_density_rms 0.049 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.067 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 255 _refine_ls_number_reflns 2642 _refine_ls_number_restraints 1 _refine_ls_restrained_S_all 1.098 _refine_ls_R_factor_all 0.0717 _refine_ls_R_factor_gt 0.0617 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.1445P)^2^+0.3674P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1932 _refine_ls_wR_factor_ref 0.2040 _reflns_number_gt 2186 _reflns_number_total 2642 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file c3ce42655f2.cif _[local]_cod_data_source_block tapas2 _[local]_cod_cif_authors_sg_H-M 'P 21/c' _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'MONOCLINIC' changed to 'monoclinic' according to /usr/data/users/saulius/crontab/automatic-downloads/rss-feeds/RSC/lib/dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26. '_exptl_absorpt_correction_type' value 'MULTI-SCAN' changed to 'multi-scan' according to /usr/data/users/saulius/crontab/automatic-downloads/rss-feeds/RSC/lib/dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26. '_refine_ls_hydrogen_treatment' value 'CONSTR' changed to 'constr' according to /usr/data/users/saulius/crontab/automatic-downloads/rss-feeds/RSC/lib/dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26. Automatic conversion script Id: cif_fix_values 2281 2013-09-26 08:29:07Z andrius Adding full bibliography for 7215472--7215483.cif. ; _cod_original_cell_volume 2203.1(11) _cod_database_code 7215476 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group C18A C 0.3282(6) 0.7661(7) 0.3411(5) 0.0788(17) Uiso 0.68 1 d PD A 1 C20A C 0.4976(8) 0.8163(8) 0.1233(6) 0.0705(19) Uiso 0.55 1 d P B 1 C21A C 0.5902(13) 0.8028(13) 0.1213(10) 0.091(3) Uiso 0.45 1 d P B 1 C18B C 0.375(2) 0.859(2) 0.4044(16) 0.109(6) Uiso 0.32 1 d P A 2 C20B C 0.5564(7) 0.8341(7) 0.1575(5) 0.0456(15) Uiso 0.45 1 d P B 2 C21B C 0.5394(9) 0.8091(10) 0.0740(8) 0.089(3) Uiso 0.55 1 d P B 2 O1 O 0.19253(19) 0.1278(2) 0.34807(14) 0.0496(6) Uani 1 1 d . . . O2 O 0.09383(18) -0.0447(3) 0.35098(14) 0.0520(6) Uani 1 1 d . . . H2 H 0.1385 -0.0534 0.3994 0.078 Uiso 1 1 calc R . . O3 O 0.2824(2) -0.2997(2) 0.12847(17) 0.0631(8) Uani 1 1 d . . . O4 O 0.22421(17) -0.41462(18) 0.00900(14) 0.0414(5) Uani 1 1 d . . . O5 O 0.36864(16) 0.42420(17) 0.09106(16) 0.0440(6) Uani 1 1 d . . . H5 H 0.3189 0.4719 0.0645 0.066 Uiso 1 1 calc R . . O6 O 0.39581(16) 0.22024(18) 0.14280(14) 0.0397(5) Uani 1 1 d . . . N1 N 0.4362(2) 0.8598(2) 0.23642(18) 0.0438(6) Uani 1 1 d . A . H1A H 0.3853 0.8075 0.2011 0.053 Uiso 1 1 calc R . . H1B H 0.4822 0.8077 0.2765 0.053 Uiso 1 1 calc R . . C1 C 0.1180(2) 0.0572(3) 0.31305(18) 0.0353(6) Uani 1 1 d . . . C2 C 0.0420(2) 0.0749(3) 0.22037(18) 0.0372(7) Uani 1 1 d . . . H2A H 0.0122 0.1632 0.2133 0.045 Uiso 1 1 calc R . . H2B H -0.0144 0.0116 0.2078 0.045 Uiso 1 1 calc R . . C3 C 0.09418(19) 0.0554(2) 0.15621(16) 0.0280(6) Uani 1 1 d . . . C4 C 0.13874(18) 0.1665(2) 0.13196(16) 0.0273(5) Uani 1 1 d . . . C5 C 0.1422(2) 0.3034(3) 0.17160(19) 0.0375(6) Uani 1 1 d . . . H5A H 0.2011 0.3518 0.1709 0.056 Uiso 1 1 calc R . . H5B H 0.1483 0.2935 0.2295 0.056 Uiso 1 1 calc R . . H5C H 0.0795 0.3508 0.1393 0.056 Uiso 1 1 calc R . . C6 C 0.18049(18) 0.1490(2) 0.06907(16) 0.0264(6) Uani 1 1 d . . . C7 C 0.2235(2) 0.2703(3) 0.03960(18) 0.0328(6) Uani 1 1 d . . . H7A H 0.2185 0.2548 -0.0182 0.039 Uiso 1 1 calc R . . H7B H 0.1802 0.3463 0.0381 0.039 Uiso 1 1 calc R . . C8 C 0.3354(2) 0.3035(2) 0.09569(17) 0.0294(6) Uani 1 1 d . . . C9 C 0.18130(19) 0.0225(2) 0.03341(16) 0.0280(6) Uani 1 1 d . . . C10 C 0.2330(2) 0.0047(3) -0.03034(19) 0.0422(7) Uani 1 1 d . . . H10A H 0.1848 0.0292 -0.0864 0.063 Uiso 1 1 calc R . . H10B H 0.2530 -0.0863 -0.0306 0.063 Uiso 1 1 calc R . . H10C H 0.2936 0.0601 -0.0140 0.063 Uiso 1 1 calc R . . C11 C 0.13543(19) -0.0866(2) 0.05733(17) 0.0285(6) Uani 1 1 d . . . C12 C 0.1273(2) -0.2201(3) 0.01280(18) 0.0363(6) Uani 1 1 d . . . H12A H 0.1198 -0.2037 -0.0455 0.044 Uiso 1 1 calc R . . H12B H 0.0645 -0.2641 0.0104 0.044 Uiso 1 1 calc R . . C13 C 0.2200(2) -0.3151(2) 0.05486(17) 0.0315(6) Uani 1 1 d . . . C14 C 0.0940(2) -0.0712(2) 0.12087(17) 0.0301(6) Uani 1 1 d . . . C15 C 0.0510(2) -0.1916(3) 0.1502(2) 0.0416(7) Uani 1 1 d . . . H15A H -0.0221 -0.1999 0.1162 0.062 Uiso 1 1 calc R . . H15B H 0.0616 -0.1809 0.2092 0.062 Uiso 1 1 calc R . . H15C H 0.0864 -0.2700 0.1439 0.062 Uiso 1 1 calc R . . C16 C 0.3903(3) 0.9560(3) 0.2789(2) 0.0537(9) Uani 1 1 d . A . H16A H 0.4433 1.0192 0.3115 0.064 Uiso 1 1 calc R . . H16B H 0.3346 1.0046 0.2355 0.064 Uiso 1 1 calc R . . C17 C 0.3493(3) 0.8894(6) 0.3358(4) 0.0820(14) Uani 1 1 d D . . C19 C 0.4911(4) 0.9288(4) 0.1853(3) 0.0693(12) Uani 1 1 d . . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O1 0.0511(14) 0.0580(13) 0.0336(12) -0.0023(9) 0.0102(11) -0.0165(11) O2 0.0370(13) 0.0717(15) 0.0358(12) 0.0137(11) 0.0018(11) -0.0167(11) O3 0.0577(16) 0.0477(13) 0.0494(14) -0.0166(11) -0.0166(13) 0.0190(11) O4 0.0424(12) 0.0295(10) 0.0372(11) -0.0043(7) -0.0009(10) 0.0091(8) O5 0.0266(10) 0.0272(10) 0.0614(15) 0.0074(8) -0.0009(11) -0.0001(7) O6 0.0267(10) 0.0300(10) 0.0476(13) 0.0057(8) -0.0015(10) -0.0002(8) N1 0.0379(13) 0.0355(13) 0.0426(15) 0.0003(10) -0.0009(12) 0.0051(10) C1 0.0273(14) 0.0478(15) 0.0328(15) -0.0007(11) 0.0138(13) 0.0021(11) C2 0.0239(13) 0.0541(17) 0.0330(15) 0.0016(11) 0.0106(13) 0.0041(11) C3 0.0190(12) 0.0367(13) 0.0240(12) 0.0013(10) 0.0037(11) 0.0041(9) C4 0.0197(12) 0.0276(12) 0.0279(12) -0.0016(9) 0.0018(10) 0.0035(9) C5 0.0373(15) 0.0320(13) 0.0400(16) -0.0037(11) 0.0116(14) 0.0065(11) C6 0.0179(11) 0.0288(12) 0.0259(13) 0.0024(9) 0.0016(11) 0.0015(9) C7 0.0249(13) 0.0334(13) 0.0340(14) 0.0073(10) 0.0050(12) 0.0009(10) C8 0.0237(13) 0.0251(11) 0.0349(14) 0.0007(9) 0.0065(12) 0.0005(9) C9 0.0224(12) 0.0318(13) 0.0251(12) -0.0003(10) 0.0041(10) 0.0033(10) C10 0.0403(16) 0.0531(17) 0.0350(15) -0.0030(13) 0.0168(14) 0.0049(13) C11 0.0225(13) 0.0267(12) 0.0270(13) -0.0017(9) -0.0004(11) 0.0034(9) C12 0.0329(15) 0.0299(13) 0.0330(14) -0.0055(11) -0.0013(12) 0.0044(11) C13 0.0281(13) 0.0247(12) 0.0317(14) -0.0018(9) 0.0010(12) -0.0020(9) C14 0.0192(12) 0.0321(13) 0.0302(14) 0.0062(10) 0.0001(11) -0.0016(9) C15 0.0340(15) 0.0397(15) 0.0440(17) 0.0068(12) 0.0078(14) -0.0088(11) C16 0.0333(16) 0.0487(17) 0.063(2) -0.0055(15) 0.0018(17) 0.0151(13) C17 0.045(2) 0.111(4) 0.087(3) 0.008(3) 0.023(3) 0.027(2) C19 0.096(3) 0.049(2) 0.068(3) 0.0257(17) 0.037(3) 0.0201(19) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C21A C20A C19 114.1(10) C21B C20B C19 123.9(8) C1 O2 H2 109.5 C8 O5 H5 109.5 C16 N1 C19 112.5(3) C16 N1 H1A 109.1 C19 N1 H1A 109.1 C16 N1 H1B 109.1 C19 N1 H1B 109.1 H1A N1 H1B 107.8 O1 C1 O2 123.5(3) O1 C1 C2 123.8(3) O2 C1 C2 112.8(2) C1 C2 C3 112.6(2) C1 C2 H2A 109.1 C3 C2 H2A 109.1 C1 C2 H2B 109.1 C3 C2 H2B 109.1 H2A C2 H2B 107.8 C14 C3 C4 121.3(2) C14 C3 C2 119.6(2) C4 C3 C2 119.1(2) C6 C4 C3 118.6(2) C6 C4 C5 119.6(2) C3 C4 C5 121.8(2) C4 C5 H5A 109.5 C4 C5 H5B 109.5 H5A C5 H5B 109.5 C4 C5 H5C 109.5 H5A C5 H5C 109.5 H5B C5 H5C 109.5 C4 C6 C9 120.7(2) C4 C6 C7 118.6(2) C9 C6 C7 120.7(2) C8 C7 C6 114.2(2) C8 C7 H7A 108.7 C6 C7 H7A 108.7 C8 C7 H7B 108.7 C6 C7 H7B 108.7 H7A C7 H7B 107.6 O6 C8 O5 120.0(2) O6 C8 C7 122.1(2) O5 C8 C7 117.8(2) C11 C9 C6 120.0(2) C11 C9 C10 120.4(2) C6 C9 C10 119.6(2) C9 C10 H10A 109.5 C9 C10 H10B 109.5 H10A C10 H10B 109.5 C9 C10 H10C 109.5 H10A C10 H10C 109.5 H10B C10 H10C 109.5 C9 C11 C14 120.0(2) C9 C11 C12 119.9(2) C14 C11 C12 120.1(2) C11 C12 C13 115.6(2) C11 C12 H12A 108.4 C13 C12 H12A 108.4 C11 C12 H12B 108.4 C13 C12 H12B 108.4 H12A C12 H12B 107.4 O3 C13 O4 122.4(3) O3 C13 C12 121.9(2) O4 C13 C12 115.6(2) C3 C14 C11 119.3(2) C3 C14 C15 121.2(2) C11 C14 C15 119.5(2) C14 C15 H15A 109.5 C14 C15 H15B 109.5 H15A C15 H15B 109.5 C14 C15 H15C 109.5 H15A C15 H15C 109.5 H15B C15 H15C 109.5 C17 C16 N1 111.9(3) C17 C16 H16A 109.2 N1 C16 H16A 109.2 C17 C16 H16B 109.2 N1 C16 H16B 109.2 H16A C16 H16B 107.9 C18B C17 C18A 69.6(12) C18B C17 C16 140.0(14) C18A C17 C16 130.2(5) C20B C19 N1 112.7(3) N1 C19 C20A 103.0(4) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance C18A C17 1.289(8) C20A C21A 1.313(17) C20A C19 1.576(9) C18B C17 1.12(2) C20B C21B 1.370(13) C20B C19 1.518(8) O1 C1 1.208(4) O2 C1 1.325(3) O2 H2 0.8200 O3 C13 1.224(4) O4 C13 1.287(3) O5 C8 1.316(3) O5 H5 0.8200 O6 C8 1.236(3) N1 C16 1.494(4) N1 C19 1.532(5) N1 H1A 0.9000 N1 H1B 0.9000 C1 C2 1.528(4) C2 C3 1.543(3) C2 H2A 0.9700 C2 H2B 0.9700 C3 C14 1.411(4) C3 C4 1.419(3) C4 C6 1.415(3) C4 C5 1.529(3) C5 H5A 0.9600 C5 H5B 0.9600 C5 H5C 0.9600 C6 C9 1.415(3) C6 C7 1.531(3) C7 C8 1.515(4) C7 H7A 0.9700 C7 H7B 0.9700 C9 C11 1.411(3) C9 C10 1.530(3) C10 H10A 0.9600 C10 H10B 0.9600 C10 H10C 0.9600 C11 C14 1.420(4) C11 C12 1.526(3) C12 C13 1.542(4) C12 H12A 0.9700 C12 H12B 0.9700 C14 C15 1.523(3) C15 H15A 0.9600 C15 H15B 0.9600 C15 H15C 0.9600 C16 C17 1.467(7) C16 H16A 0.9700 C16 H16B 0.9700 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A O2 H2 O4 0.82 1.81 2.622(3) 172.4 4_556 O5 H5 O4 0.82 1.72 2.540(3) 173.6 1_565 N1 H1A O3 0.90 1.84 2.735(4) 179.3 1_565 N1 H1B O6 0.90 1.93 2.816(3) 166.9 2_655