#------------------------------------------------------------------------------ #$Date: 2016-03-26 21:55:20 +0200 (Sat, 26 Mar 2016) $ #$Revision: 180485 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/21/54/7215480.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7215480 loop_ _publ_author_name 'Adalder, Tapas Kumar' 'Dastidar, Parthasarathi' _publ_section_title ; The role of secondary ammonium cations in controlling the conformation of C3-symmetric acid moieties and its implication for the design of supramolecular capsules ; _journal_issue 22 _journal_name_full CrystEngComm _journal_page_first 4867 _journal_paper_doi 10.1039/c3ce42655f _journal_volume 16 _journal_year 2014 _chemical_absolute_configuration R _chemical_formula_moiety 'C15 H17 O6, C8 H20 N' _chemical_formula_sum 'C23 H37 N O6' _chemical_formula_weight 423.54 _chemical_name_systematic ; ? ; _space_group_IT_number 4 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall 'P 2yb' _symmetry_space_group_name_H-M 'P 1 21 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 117.32(8) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 8.405(11) _cell_length_b 16.69(2) _cell_length_c 9.156(13) _cell_measurement_temperature 296(2) _cell_volume 1141(3) _computing_cell_refinement 'BRUKER APEX II' _computing_data_collection 'BRUKER APEX II' _computing_data_reduction 'BRUKER APEX II' _computing_molecular_graphics 'MERCURY 2.3, PLATON' _computing_publication_material 'MERCURY 2.3, PLATON' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 296(2) _diffrn_measured_fraction_theta_full 1.000 _diffrn_measured_fraction_theta_max 1.000 _diffrn_measurement_device_type 'BRUKER CCD AREA DETECTOR' _diffrn_measurement_method 'PHI-OMEGA SCAN' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.1200 _diffrn_reflns_av_sigmaI/netI 0.0862 _diffrn_reflns_limit_h_max 9 _diffrn_reflns_limit_h_min -9 _diffrn_reflns_limit_k_max 19 _diffrn_reflns_limit_k_min -19 _diffrn_reflns_limit_l_max 10 _diffrn_reflns_limit_l_min -10 _diffrn_reflns_number 10904 _diffrn_reflns_theta_full 24.99 _diffrn_reflns_theta_max 24.99 _diffrn_reflns_theta_min 2.44 _exptl_absorpt_coefficient_mu 0.088 _exptl_absorpt_correction_T_max 0.9581 _exptl_absorpt_correction_T_min 0.9434 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details SADABS _exptl_crystal_colour COLOURLESS _exptl_crystal_density_diffrn 1.233 _exptl_crystal_density_method 'not measured' _exptl_crystal_description BLOCK _exptl_crystal_F_000 460 _exptl_crystal_size_max 0.60 _exptl_crystal_size_mid 0.55 _exptl_crystal_size_min 0.49 _refine_diff_density_max 0.863 _refine_diff_density_min -0.359 _refine_diff_density_rms 0.064 _refine_ls_abs_structure_details 'Flack H D (1983), Acta Cryst. A39, 876-881' _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.047 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 286 _refine_ls_number_reflns 4018 _refine_ls_number_restraints 1 _refine_ls_restrained_S_all 1.047 _refine_ls_R_factor_all 0.0673 _refine_ls_R_factor_gt 0.0630 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.1140P)^2^+0.0001P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1606 _refine_ls_wR_factor_ref 0.1643 _reflns_number_gt 3686 _reflns_number_total 4018 _reflns_threshold_expression >2sigma(I) _cod_data_source_file c3ce42655f2.cif _cod_data_source_block TA0885 _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'MONOCLINIC' changed to 'monoclinic' according to /usr/data/users/saulius/crontab/automatic-downloads/rss-feeds/RSC/lib/dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26. '_exptl_absorpt_correction_type' value 'MULTI-SCAN' changed to 'multi-scan' according to /usr/data/users/saulius/crontab/automatic-downloads/rss-feeds/RSC/lib/dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26. Automatic conversion script Id: cif_fix_values 2281 2013-09-26 08:29:07Z andrius Adding full bibliography for 7215472--7215483.cif. ; _cod_original_sg_symbol_H-M 'P 21' _cod_database_code 7215480 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags O1 O 1.0268(3) 0.73534(13) 0.7991(2) 0.0287(5) Uani 1 1 d . O2 O 0.7303(3) 0.74651(13) 0.6822(2) 0.0280(5) Uani 1 1 d . O3 O 0.7447(3) 0.64210(12) -0.1274(2) 0.0273(5) Uani 1 1 d . O4 O 0.7690(3) 0.61875(12) 0.1189(2) 0.0322(5) Uani 1 1 d . O5 O 0.0821(3) 0.96434(13) 0.0227(3) 0.0406(6) Uani 1 1 d . O6 O 0.3233(3) 0.97780(13) -0.0124(3) 0.0285(5) Uani 1 1 d . N1 N 0.1150(3) 0.57707(14) 0.9040(3) 0.0248(5) Uani 1 1 d . H1A H 0.0324 0.5541 0.9274 0.030 Uiso 1 1 calc R H1B H 0.0821 0.6285 0.8779 0.030 Uiso 1 1 calc R C1 C 0.8860(4) 0.76952(17) 0.7057(3) 0.0210(6) Uani 1 1 d . C2 C 0.8873(4) 0.84306(17) 0.6113(3) 0.0250(6) Uani 1 1 d . H2A H 1.0094 0.8547 0.6334 0.030 Uiso 1 1 calc R H2B H 0.8434 0.8884 0.6487 0.030 Uiso 1 1 calc R C3 C 0.7723(4) 0.83250(15) 0.4276(3) 0.0216(6) Uani 1 1 d . C4 C 0.8485(3) 0.79564(15) 0.3368(3) 0.0197(5) Uani 1 1 d . C5 C 1.0391(4) 0.76424(19) 0.4213(4) 0.0297(7) Uani 1 1 d . H5A H 1.0834 0.7667 0.5383 0.045 Uiso 1 1 calc R H5B H 1.1134 0.7965 0.3904 0.045 Uiso 1 1 calc R H5C H 1.0410 0.7097 0.3887 0.045 Uiso 1 1 calc R C6 C 0.7456(4) 0.78662(15) 0.1670(3) 0.0209(6) Uani 1 1 d . C7 C 0.8263(4) 0.75185(17) 0.0646(4) 0.0235(6) Uani 1 1 d . H7A H 0.9557 0.7559 0.1255 0.028 Uiso 1 1 calc R H7B H 0.7879 0.7835 -0.0347 0.028 Uiso 1 1 calc R C8 C 0.7763(4) 0.66553(17) 0.0173(3) 0.0223(6) Uani 1 1 d . C9 C 0.5640(4) 0.80905(16) 0.0880(3) 0.0213(6) Uani 1 1 d . C10 C 0.4526(4) 0.79712(18) -0.0950(3) 0.0273(6) Uani 1 1 d . H10A H 0.3746 0.8423 -0.1409 0.041 Uiso 1 1 calc R H10B H 0.3823 0.7493 -0.1147 0.041 Uiso 1 1 calc R H10C H 0.5301 0.7922 -0.1455 0.041 Uiso 1 1 calc R C11 C 0.4869(4) 0.84109(15) 0.1804(3) 0.0213(6) Uani 1 1 d . C12 C 0.2878(4) 0.85636(17) 0.1019(3) 0.0234(6) Uani 1 1 d . H12A H 0.2466 0.8442 0.1826 0.028 Uiso 1 1 calc R H12B H 0.2302 0.8186 0.0122 0.028 Uiso 1 1 calc R C13 C 0.2226(4) 0.93945(18) 0.0356(3) 0.0238(6) Uani 1 1 d . C14 C 0.5923(4) 0.85560(17) 0.3491(3) 0.0227(6) Uani 1 1 d . C15 C 0.5090(4) 0.8949(2) 0.4445(4) 0.0351(7) Uani 1 1 d . H15A H 0.5940 0.9307 0.5244 0.053 Uiso 1 1 calc R H15B H 0.4746 0.8547 0.4995 0.053 Uiso 1 1 calc R H15C H 0.4052 0.9246 0.3709 0.053 Uiso 1 1 calc R C16 C 0.3493(4) 0.49134(19) 1.1146(4) 0.0329(7) Uani 1 1 d . H16A H 0.3755 0.4646 1.0352 0.049 Uiso 1 1 calc R H16B H 0.2548 0.4635 1.1245 0.049 Uiso 1 1 calc R H16C H 0.4545 0.4919 1.2191 0.049 Uiso 1 1 calc R C17 C 0.2912(4) 0.57653(18) 1.0590(4) 0.0264(6) Uani 1 1 d . H17 H 0.3818 0.6017 1.0348 0.032 Uiso 1 1 calc R C18 C 0.2677(4) 0.6278(2) 1.1841(4) 0.0373(8) Uani 1 1 d . H18A H 0.1836 0.6019 1.2142 0.045 Uiso 1 1 calc R H18B H 0.2177 0.6792 1.1350 0.045 Uiso 1 1 calc R C19 C 0.4464(5) 0.6415(2) 1.3405(5) 0.0518(10) Uani 1 1 d . H19A H 0.5361 0.6587 1.3099 0.078 Uiso 1 1 calc R H19B H 0.4839 0.5925 1.4017 0.078 Uiso 1 1 calc R H19C H 0.4305 0.6820 1.4071 0.078 Uiso 1 1 calc R C20 C 0.2457(4) 0.5706(3) 0.7129(4) 0.0400(8) Uani 1 1 d . H20A H 0.3624 0.5553 0.7962 0.060 Uiso 1 1 calc R H20B H 0.2364 0.6280 0.7082 0.060 Uiso 1 1 calc R H20C H 0.2279 0.5504 0.6084 0.060 Uiso 1 1 calc R C21 C 0.1060(4) 0.53649(17) 0.7536(4) 0.0275(6) Uani 1 1 d . H21 H 0.1278 0.4790 0.7754 0.033 Uiso 1 1 calc R C22 C -0.0853(4) 0.5490(2) 0.6165(4) 0.0394(8) Uani 1 1 d . H22A H -0.1690 0.5364 0.6590 0.047 Uiso 1 1 calc R H22B H -0.1009 0.6051 0.5851 0.047 Uiso 1 1 calc R C23 C -0.1308(6) 0.4984(3) 0.4646(6) 0.0646(12) Uani 1 1 d . H23A H -0.1174 0.4427 0.4941 0.097 Uiso 1 1 calc R H23B H -0.0516 0.5119 0.4191 0.097 Uiso 1 1 calc R H23C H -0.2523 0.5086 0.3845 0.097 Uiso 1 1 calc R H2 H 0.757(6) 0.694(4) 0.761(5) 0.068(14) Uiso 1 1 d . H6 H 0.278(7) 1.025(4) -0.058(6) 0.065(14) Uiso 1 1 d . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O1 0.0255(10) 0.0230(10) 0.0320(10) 0.0025(8) 0.0084(9) 0.0003(8) O2 0.0225(10) 0.0359(12) 0.0241(10) 0.0067(9) 0.0093(8) -0.0002(8) O3 0.0376(11) 0.0224(10) 0.0248(10) -0.0017(8) 0.0168(9) -0.0015(8) O4 0.0531(14) 0.0207(10) 0.0279(11) 0.0004(9) 0.0231(10) -0.0027(9) O5 0.0284(12) 0.0269(12) 0.0723(17) -0.0005(11) 0.0283(12) 0.0037(9) O6 0.0350(11) 0.0191(10) 0.0366(12) 0.0052(9) 0.0210(10) 0.0056(9) N1 0.0226(12) 0.0188(12) 0.0318(13) -0.0023(10) 0.0115(10) -0.0023(9) C1 0.0229(14) 0.0224(13) 0.0141(12) -0.0037(10) 0.0055(10) -0.0004(10) C2 0.0280(15) 0.0205(14) 0.0242(14) -0.0028(11) 0.0099(12) -0.0039(11) C3 0.0254(14) 0.0175(14) 0.0212(13) 0.0025(11) 0.0102(11) -0.0005(10) C4 0.0225(13) 0.0150(13) 0.0216(13) -0.0004(11) 0.0101(11) -0.0010(10) C5 0.0275(15) 0.0303(16) 0.0305(15) 0.0006(12) 0.0127(12) 0.0033(12) C6 0.0288(15) 0.0095(12) 0.0282(14) 0.0009(10) 0.0164(12) -0.0009(10) C7 0.0266(14) 0.0213(14) 0.0272(14) 0.0035(12) 0.0163(12) 0.0005(11) C8 0.0215(13) 0.0237(14) 0.0247(14) -0.0014(11) 0.0131(11) 0.0020(10) C9 0.0247(14) 0.0132(12) 0.0237(13) 0.0021(10) 0.0093(11) -0.0021(10) C10 0.0313(16) 0.0242(15) 0.0254(14) -0.0016(12) 0.0122(12) 0.0006(12) C11 0.0266(14) 0.0126(12) 0.0247(14) 0.0018(10) 0.0118(11) 0.0005(10) C12 0.0227(14) 0.0211(14) 0.0275(14) 0.0009(11) 0.0127(12) -0.0009(11) C13 0.0214(14) 0.0233(14) 0.0252(13) -0.0062(11) 0.0094(11) -0.0013(11) C14 0.0267(14) 0.0181(13) 0.0225(13) 0.0029(11) 0.0106(11) 0.0015(11) C15 0.0323(17) 0.0453(19) 0.0274(16) -0.0034(14) 0.0135(13) 0.0101(14) C16 0.0335(16) 0.0291(17) 0.0362(17) 0.0070(13) 0.0160(14) 0.0075(13) C17 0.0204(14) 0.0248(15) 0.0307(15) 0.0009(12) 0.0089(12) 0.0000(11) C18 0.0365(17) 0.0284(17) 0.0341(16) -0.0048(14) 0.0051(14) 0.0043(13) C19 0.049(2) 0.042(2) 0.0415(19) -0.0082(17) 0.0009(17) -0.0013(17) C20 0.0352(18) 0.052(2) 0.0357(17) -0.0001(16) 0.0187(14) -0.0011(15) C21 0.0357(16) 0.0203(14) 0.0286(15) -0.0002(11) 0.0166(13) 0.0029(12) C22 0.0327(17) 0.0422(19) 0.0395(19) -0.0106(15) 0.0132(15) -0.0054(14) C23 0.064(3) 0.059(3) 0.065(3) -0.009(2) 0.023(2) 0.000(2) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C1 O2 H2 104(3) C13 O6 H6 113(3) C21 N1 C17 118.2(2) C21 N1 H1A 107.8 C17 N1 H1A 107.8 C21 N1 H1B 107.8 C17 N1 H1B 107.8 H1A N1 H1B 107.1 O1 C1 O2 123.8(3) O1 C1 C2 121.2(3) O2 C1 C2 115.0(2) C1 C2 C3 111.9(2) C1 C2 H2A 109.2 C3 C2 H2A 109.2 C1 C2 H2B 109.2 C3 C2 H2B 109.2 H2A C2 H2B 107.9 C14 C3 C4 119.8(3) C14 C3 C2 121.8(3) C4 C3 C2 118.4(3) C6 C4 C3 119.2(3) C6 C4 C5 120.0(2) C3 C4 C5 120.8(3) C4 C5 H5A 109.5 C4 C5 H5B 109.5 H5A C5 H5B 109.5 C4 C5 H5C 109.5 H5A C5 H5C 109.5 H5B C5 H5C 109.5 C4 C6 C9 121.0(3) C4 C6 C7 120.6(3) C9 C6 C7 118.4(3) C6 C7 C8 113.7(2) C6 C7 H7A 108.8 C8 C7 H7A 108.8 C6 C7 H7B 108.8 C8 C7 H7B 108.8 H7A C7 H7B 107.7 O4 C8 O3 121.6(3) O4 C8 C7 119.4(3) O3 C8 C7 119.0(2) C11 C9 C6 119.3(3) C11 C9 C10 120.1(3) C6 C9 C10 120.6(2) C9 C10 H10A 109.5 C9 C10 H10B 109.5 H10A C10 H10B 109.5 C9 C10 H10C 109.5 H10A C10 H10C 109.5 H10B C10 H10C 109.5 C9 C11 C14 120.1(3) C9 C11 C12 120.1(2) C14 C11 C12 119.8(3) C11 C12 C13 117.7(2) C11 C12 H12A 107.9 C13 C12 H12A 107.9 C11 C12 H12B 107.9 C13 C12 H12B 107.9 H12A C12 H12B 107.2 O5 C13 O6 124.2(3) O5 C13 C12 120.9(3) O6 C13 C12 114.8(2) C3 C14 C11 120.4(3) C3 C14 C15 120.3(3) C11 C14 C15 119.3(3) C14 C15 H15A 109.5 C14 C15 H15B 109.5 H15A C15 H15B 109.5 C14 C15 H15C 109.5 H15A C15 H15C 109.5 H15B C15 H15C 109.5 C17 C16 H16A 109.5 C17 C16 H16B 109.5 H16A C16 H16B 109.5 C17 C16 H16C 109.5 H16A C16 H16C 109.5 H16B C16 H16C 109.5 N1 C17 C18 107.2(2) N1 C17 C16 110.3(2) C18 C17 C16 114.3(3) N1 C17 H17 108.3 C18 C17 H17 108.3 C16 C17 H17 108.3 C17 C18 C19 112.1(3) C17 C18 H18A 109.2 C19 C18 H18A 109.2 C17 C18 H18B 109.2 C19 C18 H18B 109.2 H18A C18 H18B 107.9 C18 C19 H19A 109.5 C18 C19 H19B 109.5 H19A C19 H19B 109.5 C18 C19 H19C 109.5 H19A C19 H19C 109.5 H19B C19 H19C 109.5 C21 C20 H20A 109.5 C21 C20 H20B 109.5 H20A C20 H20B 109.5 C21 C20 H20C 109.5 H20A C20 H20C 109.5 H20B C20 H20C 109.5 C20 C21 N1 109.9(3) C20 C21 C22 113.1(3) N1 C21 C22 106.3(2) C20 C21 H21 109.1 N1 C21 H21 109.1 C22 C21 H21 109.1 C23 C22 C21 113.7(3) C23 C22 H22A 108.8 C21 C22 H22A 108.8 C23 C22 H22B 108.8 C21 C22 H22B 108.8 H22A C22 H22B 107.7 C22 C23 H23A 109.5 C22 C23 H23B 109.5 H23A C23 H23B 109.5 C22 C23 H23C 109.5 H23A C23 H23C 109.5 H23B C23 H23C 109.5 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance O1 C1 1.236(4) O2 C1 1.284(4) O2 H2 1.09(6) O3 C8 1.287(4) O4 C8 1.237(4) O5 C13 1.205(4) O6 C13 1.289(4) O6 H6 0.89(6) N1 C21 1.505(4) N1 C17 1.509(4) N1 H1A 0.9000 N1 H1B 0.9000 C1 C2 1.504(4) C2 C3 1.517(4) C2 H2A 0.9700 C2 H2B 0.9700 C3 C14 1.398(4) C3 C4 1.404(4) C4 C6 1.398(4) C4 C5 1.517(4) C5 H5A 0.9600 C5 H5B 0.9600 C5 H5C 0.9600 C6 C9 1.407(4) C6 C7 1.503(4) C7 C8 1.508(4) C7 H7A 0.9700 C7 H7B 0.9700 C9 C11 1.388(4) C9 C10 1.511(4) C10 H10A 0.9600 C10 H10B 0.9600 C10 H10C 0.9600 C11 C14 1.404(4) C11 C12 1.510(4) C12 C13 1.512(4) C12 H12A 0.9700 C12 H12B 0.9700 C14 C15 1.499(4) C15 H15A 0.9600 C15 H15B 0.9600 C15 H15C 0.9600 C16 C17 1.514(5) C16 H16A 0.9600 C16 H16B 0.9600 C16 H16C 0.9600 C17 C18 1.513(5) C17 H17 0.9800 C18 C19 1.544(5) C18 H18A 0.9700 C18 H18B 0.9700 C19 H19A 0.9600 C19 H19B 0.9600 C19 H19C 0.9600 C20 C21 1.498(5) C20 H20A 0.9600 C20 H20B 0.9600 C20 H20C 0.9600 C21 C22 1.534(5) C21 H21 0.9800 C22 C23 1.518(6) C22 H22A 0.9700 C22 H22B 0.9700 C23 H23A 0.9600 C23 H23B 0.9600 C23 H23C 0.9600 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A O6 H6 O3 0.89(6) 2.65(6) 3.187(4) 120(4) 2_655 O6 H6 O4 0.89(6) 1.65(6) 2.528(4) 169(5) 2_655 O2 H2 O3 1.09(6) 1.39(5) 2.429(4) 159(5) 1_556 N1 H1B O1 0.90 1.90 2.792(4) 171.2 1_455 N1 H1A O5 0.90 1.94 2.784(4) 154.5 2_546