#------------------------------------------------------------------------------ #$Date: 2014-04-30 07:46:05 +0300 (Wed, 30 Apr 2014) $ #$Revision: 112295 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/21/54/7215482.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7215482 loop_ _publ_author_name 'Dastidar, P.' 'ADALDER, TAPAS KUMAR' _publ_section_title ; The role of secondary ammonium cations in controlling the conformation of C3-symmetric acid moieties and its implication towards the design of supramocular capsules ; _journal_name_full CrystEngComm _journal_paper_doi 10.1039/c3ce42655f _journal_year 2014 _chemical_formula_moiety 'C15 H17 O6, C8 H20 N' _chemical_formula_sum 'C23 H37 N O6' _chemical_formula_weight 423.54 _chemical_name_systematic ; ? ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90 _cell_angle_beta 111.665(5) _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 14.494(5) _cell_length_b 8.794(5) _cell_length_c 19.179(5) _cell_measurement_temperature 296(2) _cell_volume 2271.9(16) _computing_cell_refinement 'BRUKER APEX II' _computing_data_collection 'BRUKER APEX II' _computing_data_reduction 'BRUKER APEX II' _computing_molecular_graphics 'MERCURY 2.3, PLATON' _computing_publication_material 'MERCURY 2.3, PLATON' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 296(2) _diffrn_measured_fraction_theta_full 0.999 _diffrn_measured_fraction_theta_max 0.999 _diffrn_measurement_device_type 'BRUKER CCD AREA DETECTOR' _diffrn_measurement_method 'PHI-OMEGA SCAN' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0367 _diffrn_reflns_av_sigmaI/netI 0.0261 _diffrn_reflns_limit_h_max 17 _diffrn_reflns_limit_h_min -17 _diffrn_reflns_limit_k_max 10 _diffrn_reflns_limit_k_min -10 _diffrn_reflns_limit_l_max 23 _diffrn_reflns_limit_l_min -23 _diffrn_reflns_number 24321 _diffrn_reflns_theta_full 25.50 _diffrn_reflns_theta_max 25.50 _diffrn_reflns_theta_min 2.58 _exptl_absorpt_coefficient_mu 0.088 _exptl_absorpt_correction_T_max 0.9723 _exptl_absorpt_correction_T_min 0.9655 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details SADABS _exptl_crystal_colour COLOURLESS _exptl_crystal_density_diffrn 1.238 _exptl_crystal_density_method 'not measured' _exptl_crystal_description BLOCK _exptl_crystal_F_000 920 _exptl_crystal_size_max 0.40 _exptl_crystal_size_mid 0.35 _exptl_crystal_size_min 0.32 _refine_diff_density_max 0.360 _refine_diff_density_min -0.275 _refine_diff_density_rms 0.043 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.066 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 280 _refine_ls_number_reflns 4245 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.066 _refine_ls_R_factor_all 0.0628 _refine_ls_R_factor_gt 0.0502 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0711P)^2^+0.9129P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1366 _refine_ls_wR_factor_ref 0.1483 _reflns_number_gt 3380 _reflns_number_total 4245 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file c3ce42655f2.cif _[local]_cod_data_source_block ta0880-mono _[local]_cod_cif_authors_sg_H-M 'P 21/c' _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'MONOCLINIC' changed to 'monoclinic' according to /usr/data/users/saulius/crontab/automatic-downloads/rss-feeds/RSC/lib/dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26. '_exptl_absorpt_correction_type' value 'MULTI-SCAN' changed to 'multi-scan' according to /usr/data/users/saulius/crontab/automatic-downloads/rss-feeds/RSC/lib/dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26. Automatic conversion script Id: cif_fix_values 2281 2013-09-26 08:29:07Z andrius ; _cod_database_code 7215482 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags O1 O 0.26799(10) 0.88649(14) 1.07917(8) 0.0377(3) Uani 1 1 d . O2 O 0.20942(12) 0.97591(17) 1.16185(8) 0.0501(4) Uani 1 1 d . O3 O 0.38292(10) 0.11691(15) 1.09165(9) 0.0455(4) Uani 1 1 d . H3 H 0.3421 0.0528 1.0922 0.068 Uiso 1 1 calc R O4 O 0.38394(11) 0.35313(16) 1.05582(10) 0.0487(4) Uani 1 1 d . O5 O 0.10072(18) 0.4919(2) 0.74098(12) 0.0775(6) Uani 1 1 d . H5 H 0.1369 0.5216 0.7195 0.116 Uiso 1 1 calc R O6 O 0.10901(17) 0.7313(2) 0.77365(12) 0.0742(6) Uani 1 1 d . N1 N 0.37879(12) 0.67615(18) 0.03262(9) 0.0333(4) Uani 1 1 d . H1A H 0.3383 0.7429 0.0427 0.040 Uiso 1 1 calc R H1B H 0.3682 0.5841 0.0488 0.040 Uiso 1 1 calc R C1 C 0.20579(14) 0.8854(2) 1.11174(10) 0.0303(4) Uani 1 1 d . C2 C 0.12060(15) 0.7727(2) 1.08558(12) 0.0377(5) Uani 1 1 d . H2A H 0.1156 0.7248 1.1296 0.045 Uiso 1 1 calc R H2B H 0.0597 0.8294 1.0612 0.045 Uiso 1 1 calc R C3 C 0.12580(13) 0.6484(2) 1.03258(10) 0.0305(4) Uani 1 1 d . C4 C 0.07977(13) 0.6668(2) 0.95480(11) 0.0310(4) Uani 1 1 d . C5 C 0.03301(18) 0.8182(2) 0.92325(13) 0.0484(5) Uani 1 1 d . H5A H 0.0343 0.8317 0.8740 0.073 Uiso 1 1 calc R H5B H 0.0695 0.8988 0.9554 0.073 Uiso 1 1 calc R H5C H -0.0345 0.8200 0.9204 0.073 Uiso 1 1 calc R C6 C 0.07772(13) 0.5459(2) 0.90674(10) 0.0305(4) Uani 1 1 d . C7 C 0.01912(14) 0.5604(3) 0.82211(11) 0.0392(5) Uani 1 1 d . H7A H -0.0133 0.4642 0.8034 0.047 Uiso 1 1 calc R H7B H -0.0323 0.6365 0.8139 0.047 Uiso 1 1 calc R C8 C 0.08180(15) 0.6034(2) 0.77755(11) 0.0385(5) Uani 1 1 d . C9 C 0.12643(13) 0.4087(2) 0.93583(11) 0.0312(4) Uani 1 1 d . C10 C 0.12769(18) 0.2789(2) 0.88464(13) 0.0465(5) Uani 1 1 d . H10A H 0.1950 0.2485 0.8949 0.070 Uiso 1 1 calc R H10B H 0.0977 0.3112 0.8333 0.070 Uiso 1 1 calc R H10C H 0.0911 0.1946 0.8932 0.070 Uiso 1 1 calc R C11 C 0.17513(13) 0.3935(2) 1.01371(11) 0.0314(4) Uani 1 1 d . C12 C 0.22678(14) 0.2460(2) 1.04584(12) 0.0378(5) Uani 1 1 d . H12A H 0.2145 0.2231 1.0911 0.045 Uiso 1 1 calc R H12B H 0.1972 0.1653 1.0101 0.045 Uiso 1 1 calc R C13 C 0.33707(14) 0.2449(2) 1.06445(11) 0.0335(4) Uani 1 1 d . C14 C 0.17438(13) 0.5121(2) 1.06219(10) 0.0322(4) Uani 1 1 d . C15 C 0.22646(18) 0.4921(3) 1.14597(12) 0.0508(6) Uani 1 1 d . H15A H 0.2343 0.5894 1.1701 0.076 Uiso 1 1 calc R H15B H 0.2906 0.4473 1.1563 0.076 Uiso 1 1 calc R H15C H 0.1876 0.4269 1.1646 0.076 Uiso 1 1 calc R C16 C 0.48419(16) 0.7219(3) 0.07491(11) 0.0419(5) Uani 1 1 d . H16A H 0.4884 0.8320 0.0750 0.050 Uiso 1 1 calc R H16B H 0.5250 0.6830 0.0487 0.050 Uiso 1 1 calc R C17 C 0.52619(18) 0.6662(3) 0.15509(13) 0.0522(6) Uani 1 1 d . H17 H 0.5109 0.5577 0.1555 0.063 Uiso 1 1 calc R C18 C 0.6386(2) 0.6855(4) 0.18661(15) 0.0688(8) Uani 1 1 d . H18A H 0.6661 0.6382 0.1535 0.103 Uiso 1 1 calc R H18B H 0.6658 0.6385 0.2351 0.103 Uiso 1 1 calc R H18C H 0.6548 0.7918 0.1911 0.103 Uiso 1 1 calc R C19 C 0.4823(3) 0.7486(5) 0.20403(16) 0.1017(13) Uani 1 1 d . H19A H 0.5016 0.8537 0.2078 0.153 Uiso 1 1 calc R H19B H 0.5060 0.7037 0.2531 0.153 Uiso 1 1 calc R H19C H 0.4113 0.7413 0.1825 0.153 Uiso 1 1 calc R C20 C 0.35241(16) 0.6695(2) -0.05101(11) 0.0394(5) Uani 1 1 d . H20A H 0.2832 0.6402 -0.0745 0.047 Uiso 1 1 calc R H20B H 0.3919 0.5906 -0.0618 0.047 Uiso 1 1 calc R C21 C 0.36790(16) 0.8162(2) -0.08638(11) 0.0425(5) Uani 1 1 d . H21 H 0.4344 0.8550 -0.0572 0.051 Uiso 1 1 calc R C22 C 0.2926(2) 0.9366(3) -0.08765(15) 0.0669(8) Uani 1 1 d . H22A H 0.3069 1.0290 -0.1083 0.100 Uiso 1 1 calc R H22B H 0.2958 0.9550 -0.0374 0.100 Uiso 1 1 calc R H22C H 0.2272 0.9021 -0.1180 0.100 Uiso 1 1 calc R C23 C 0.3622(2) 0.7829(3) -0.16561(13) 0.0617(7) Uani 1 1 d . H23A H 0.2978 0.7432 -0.1947 0.093 Uiso 1 1 calc R H23B H 0.4120 0.7095 -0.1639 0.093 Uiso 1 1 calc R H23C H 0.3733 0.8750 -0.1882 0.093 Uiso 1 1 calc R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O1 0.0430(8) 0.0302(7) 0.0492(8) -0.0038(6) 0.0278(7) -0.0024(6) O2 0.0706(11) 0.0463(8) 0.0465(9) -0.0181(7) 0.0370(8) -0.0174(8) O3 0.0346(8) 0.0297(7) 0.0691(10) 0.0090(7) 0.0156(7) 0.0016(6) O4 0.0393(8) 0.0316(7) 0.0772(11) 0.0091(7) 0.0239(8) -0.0030(6) O5 0.1266(18) 0.0548(11) 0.0883(14) -0.0146(10) 0.0831(14) -0.0187(11) O6 0.1025(16) 0.0545(11) 0.0884(14) -0.0047(10) 0.0619(13) -0.0116(10) N1 0.0381(9) 0.0278(8) 0.0390(9) 0.0028(7) 0.0200(7) 0.0021(7) C1 0.0388(10) 0.0265(9) 0.0291(9) 0.0023(8) 0.0168(8) 0.0035(8) C2 0.0394(11) 0.0380(10) 0.0429(11) -0.0069(9) 0.0236(9) -0.0028(8) C3 0.0290(9) 0.0319(9) 0.0358(10) -0.0043(8) 0.0180(8) -0.0038(7) C4 0.0280(9) 0.0293(9) 0.0388(10) 0.0012(8) 0.0162(8) 0.0015(7) C5 0.0526(13) 0.0388(11) 0.0536(13) 0.0046(10) 0.0195(11) 0.0129(10) C6 0.0260(9) 0.0357(10) 0.0317(10) 0.0019(8) 0.0130(8) -0.0007(8) C7 0.0320(10) 0.0496(12) 0.0339(10) -0.0032(9) 0.0097(8) 0.0002(9) C8 0.0385(11) 0.0451(12) 0.0283(10) 0.0009(9) 0.0083(8) -0.0010(9) C9 0.0285(9) 0.0308(9) 0.0381(10) -0.0021(8) 0.0165(8) -0.0018(7) C10 0.0557(14) 0.0383(11) 0.0500(13) -0.0070(10) 0.0248(11) 0.0033(10) C11 0.0290(9) 0.0276(9) 0.0392(10) 0.0048(8) 0.0146(8) -0.0013(7) C12 0.0352(11) 0.0299(10) 0.0490(12) 0.0073(9) 0.0165(9) 0.0005(8) C13 0.0352(10) 0.0268(9) 0.0387(10) 0.0012(8) 0.0140(8) -0.0001(8) C14 0.0305(10) 0.0352(10) 0.0326(10) 0.0020(8) 0.0136(8) -0.0042(8) C15 0.0555(14) 0.0602(14) 0.0348(11) 0.0053(10) 0.0145(10) 0.0022(11) C16 0.0412(12) 0.0453(12) 0.0398(11) 0.0028(9) 0.0157(9) -0.0025(9) C17 0.0533(14) 0.0521(13) 0.0462(13) 0.0130(10) 0.0125(11) -0.0023(11) C18 0.0545(16) 0.085(2) 0.0571(15) 0.0076(14) 0.0088(13) 0.0055(14) C19 0.076(2) 0.187(4) 0.0462(15) 0.016(2) 0.0281(15) 0.030(2) C20 0.0442(12) 0.0395(11) 0.0358(10) -0.0050(9) 0.0161(9) 0.0006(9) C21 0.0434(12) 0.0505(12) 0.0345(10) 0.0044(9) 0.0155(9) -0.0020(10) C22 0.104(2) 0.0513(14) 0.0601(16) 0.0147(12) 0.0473(16) 0.0210(15) C23 0.0654(16) 0.0846(18) 0.0434(13) 0.0123(13) 0.0299(12) 0.0185(14) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C13 O3 H3 109.5 C8 O5 H5 109.5 C16 N1 C20 113.24(15) C16 N1 H1A 108.9 C20 N1 H1A 108.9 C16 N1 H1B 108.9 C20 N1 H1B 108.9 H1A N1 H1B 107.7 O2 C1 O1 122.93(18) O2 C1 C2 118.32(16) O1 C1 C2 118.69(16) C3 C2 C1 117.25(15) C3 C2 H2A 108.0 C1 C2 H2A 108.0 C3 C2 H2B 108.0 C1 C2 H2B 108.0 H2A C2 H2B 107.2 C14 C3 C4 120.11(16) C14 C3 C2 119.24(17) C4 C3 C2 120.61(17) C6 C4 C3 119.93(17) C6 C4 C5 120.46(18) C3 C4 C5 119.61(17) C4 C5 H5A 109.5 C4 C5 H5B 109.5 H5A C5 H5B 109.5 C4 C5 H5C 109.5 H5A C5 H5C 109.5 H5B C5 H5C 109.5 C4 C6 C9 120.36(17) C4 C6 C7 120.12(17) C9 C6 C7 119.49(17) C8 C7 C6 113.99(16) C8 C7 H7A 108.8 C6 C7 H7A 108.8 C8 C7 H7B 108.8 C6 C7 H7B 108.8 H7A C7 H7B 107.6 O6 C8 O5 122.4(2) O6 C8 C7 123.4(2) O5 C8 C7 114.21(19) C11 C9 C6 119.05(16) C11 C9 C10 119.90(17) C6 C9 C10 121.05(18) C9 C10 H10A 109.5 C9 C10 H10B 109.5 H10A C10 H10B 109.5 C9 C10 H10C 109.5 H10A C10 H10C 109.5 H10B C10 H10C 109.5 C14 C11 C9 120.82(17) C14 C11 C12 119.52(17) C9 C11 C12 119.64(17) C13 C12 C11 115.19(15) C13 C12 H12A 108.5 C11 C12 H12A 108.5 C13 C12 H12B 108.5 C11 C12 H12B 108.5 H12A C12 H12B 107.5 O4 C13 O3 119.92(18) O4 C13 C12 124.14(17) O3 C13 C12 115.94(16) C11 C14 C3 119.62(17) C11 C14 C15 119.75(18) C3 C14 C15 120.63(18) C14 C15 H15A 109.5 C14 C15 H15B 109.5 H15A C15 H15B 109.5 C14 C15 H15C 109.5 H15A C15 H15C 109.5 H15B C15 H15C 109.5 N1 C16 C17 114.31(17) N1 C16 H16A 108.7 C17 C16 H16A 108.7 N1 C16 H16B 108.7 C17 C16 H16B 108.7 H16A C16 H16B 107.6 C19 C17 C16 112.1(2) C19 C17 C18 109.6(2) C16 C17 C18 109.74(19) C19 C17 H17 108.4 C16 C17 H17 108.4 C18 C17 H17 108.4 C17 C18 H18A 109.5 C17 C18 H18B 109.5 H18A C18 H18B 109.5 C17 C18 H18C 109.5 H18A C18 H18C 109.5 H18B C18 H18C 109.5 C17 C19 H19A 109.5 C17 C19 H19B 109.5 H19A C19 H19B 109.5 C17 C19 H19C 109.5 H19A C19 H19C 109.5 H19B C19 H19C 109.5 N1 C20 C21 115.04(16) N1 C20 H20A 108.5 C21 C20 H20A 108.5 N1 C20 H20B 108.5 C21 C20 H20B 108.5 H20A C20 H20B 107.5 C20 C21 C22 112.21(18) C20 C21 C23 108.78(19) C22 C21 C23 110.25(19) C20 C21 H21 108.5 C22 C21 H21 108.5 C23 C21 H21 108.5 C21 C22 H22A 109.5 C21 C22 H22B 109.5 H22A C22 H22B 109.5 C21 C22 H22C 109.5 H22A C22 H22C 109.5 H22B C22 H22C 109.5 C21 C23 H23A 109.5 C21 C23 H23B 109.5 H23A C23 H23B 109.5 C21 C23 H23C 109.5 H23A C23 H23C 109.5 H23B C23 H23C 109.5 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance O1 C1 1.272(2) O2 C1 1.234(2) O3 C13 1.314(2) O3 H3 0.8200 O4 C13 1.215(2) O5 C8 1.293(3) O5 H5 0.8200 O6 C8 1.203(3) N1 C16 1.496(3) N1 C20 1.507(2) N1 H1A 0.9000 N1 H1B 0.9000 C1 C2 1.517(3) C2 C3 1.514(3) C2 H2A 0.9700 C2 H2B 0.9700 C3 C14 1.400(3) C3 C4 1.401(3) C4 C6 1.400(3) C4 C5 1.515(3) C5 H5A 0.9600 C5 H5B 0.9600 C5 H5C 0.9600 C6 C9 1.405(3) C6 C7 1.534(3) C7 C8 1.507(3) C7 H7A 0.9700 C7 H7B 0.9700 C9 C11 1.403(3) C9 C10 1.510(3) C10 H10A 0.9600 C10 H10B 0.9600 C10 H10C 0.9600 C11 C14 1.399(3) C11 C12 1.511(3) C12 C13 1.504(3) C12 H12A 0.9700 C12 H12B 0.9700 C14 C15 1.512(3) C15 H15A 0.9600 C15 H15B 0.9600 C15 H15C 0.9600 C16 C17 1.511(3) C16 H16A 0.9700 C16 H16B 0.9700 C17 C19 1.500(4) C17 C18 1.524(4) C17 H17 0.9800 C18 H18A 0.9600 C18 H18B 0.9600 C18 H18C 0.9600 C19 H19A 0.9600 C19 H19B 0.9600 C19 H19C 0.9600 C20 C21 1.512(3) C20 H20A 0.9700 C20 H20B 0.9700 C21 C22 1.515(3) C21 C23 1.520(3) C21 H21 0.9800 C22 H22A 0.9600 C22 H22B 0.9600 C22 H22C 0.9600 C23 H23A 0.9600 C23 H23B 0.9600 C23 H23C 0.9600 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A O3 H3 O1 0.82 1.78 2.578(2) 164.9 1_545 O5 H5 O2 0.82 1.79 2.575(2) 161.2 4_575 N1 H1A O1 0.90 1.91 2.803(2) 171.2 1_554 N1 H1B O4 0.90 2.04 2.872(3) 152.6 1_554