#------------------------------------------------------------------------------ #$Date: 2014-06-01 04:28:04 +0300 (Sun, 01 Jun 2014) $ #$Revision: 115013 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/21/62/7216232.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7216232 loop_ _publ_author_name 'Zou, Jiyong' 'Shi, Wei' 'Zhang, Jing-Ya' 'He, Yan-Fei' 'Gao, Hong-Ling' 'Cui, Jian-Zhong' 'Cheng, Peng' _publ_section_title ; Alkaline cations directed structural diversity of cubic-cage-based cobalt(II) metal-organic frameworks: from pcu to bct net ; _journal_name_full CrystEngComm _journal_paper_doi 10.1039/c4ce00597j _journal_year 2014 _chemical_formula_sum 'C48 H12 Co9 Li3 N36 O54' _chemical_formula_weight 2508.13 _chemical_name_systematic ; ? ; _space_group_IT_number 167 _symmetry_cell_setting trigonal _symmetry_space_group_name_Hall '-R 3 2"c' _symmetry_space_group_name_H-M 'R -3 c :H' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 120.00 _cell_formula_units_Z 6 _cell_length_a 17.5405(9) _cell_length_b 17.5405(9) _cell_length_c 76.087(3) _cell_measurement_reflns_used 4373 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 29.2145 _cell_measurement_theta_min 2.4523 _cell_volume 20273.3(17) _computing_cell_refinement CRYSALISPRO _computing_data_collection CRYSALISPRO _computing_data_reduction CRYSALISPRO _computing_molecular_graphics 'Bruker SHELXTL' _computing_publication_material 'Bruker SHELXTL' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 293(2) _diffrn_detector_area_resol_mean 16.2116 _diffrn_measured_fraction_theta_full 0.989 _diffrn_measured_fraction_theta_max 0.989 _diffrn_measurement_device_type 'SuperNova, Single source at offset), Eos' _diffrn_measurement_method '\w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'SuperNova (Mo) X-ray Source' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0736 _diffrn_reflns_av_sigmaI/netI 0.0634 _diffrn_reflns_limit_h_max 20 _diffrn_reflns_limit_h_min -15 _diffrn_reflns_limit_k_max 19 _diffrn_reflns_limit_k_min -20 _diffrn_reflns_limit_l_max 90 _diffrn_reflns_limit_l_min -90 _diffrn_reflns_number 24619 _diffrn_reflns_theta_full 25.01 _diffrn_reflns_theta_max 25.01 _diffrn_reflns_theta_min 2.46 _exptl_absorpt_coefficient_mu 1.158 _exptl_absorpt_correction_T_max 1.00000 _exptl_absorpt_correction_T_min 0.95666 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details CRYSALISPRO _exptl_crystal_colour red _exptl_crystal_density_diffrn 1.233 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 7416 _exptl_crystal_size_max 0.08 _exptl_crystal_size_mid 0.08 _exptl_crystal_size_min 0.06 _platon_squeeze_details ; ; _refine_diff_density_max 0.557 _refine_diff_density_min -1.687 _refine_diff_density_rms 0.089 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 0.952 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 238 _refine_ls_number_reflns 3948 _refine_ls_number_restraints 4 _refine_ls_restrained_S_all 0.960 _refine_ls_R_factor_all 0.1077 _refine_ls_R_factor_gt 0.0620 _refine_ls_shift/su_max 0.002 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0934P)^2^+0.0000P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1614 _refine_ls_wR_factor_ref 0.1806 _reflns_number_gt 2281 _reflns_number_total 3948 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file c4ce00597j2.cif _[local]_cod_data_source_block p110324i _[local]_cod_cif_authors_sg_H-M R-3c _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Trigonal' changed to 'trigonal' according to /usr/data/users/saulius/crontab/automatic-downloads/rss-feeds/RSC/lib/dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26. '_exptl_absorpt_correction_type' value 'Multi-scan' changed to 'multi-scan' according to /usr/data/users/saulius/crontab/automatic-downloads/rss-feeds/RSC/lib/dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26. Automatic conversion script Id: cif_fix_values 2281 2013-09-26 08:29:07Z andrius ; _cod_original_cell_volume 20273.4(16) _cod_database_code 7216232 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-y, x-y, z' '-x+y, -x, z' 'x-y, -y, -z+1/2' '-x, -x+y, -z+1/2' 'y, x, -z+1/2' 'x+2/3, y+1/3, z+1/3' '-y+2/3, x-y+1/3, z+1/3' '-x+y+2/3, -x+1/3, z+1/3' 'x-y+2/3, -y+1/3, -z+5/6' '-x+2/3, -x+y+1/3, -z+5/6' 'y+2/3, x+1/3, -z+5/6' 'x+1/3, y+2/3, z+2/3' '-y+1/3, x-y+2/3, z+2/3' '-x+y+1/3, -x+2/3, z+2/3' 'x-y+1/3, -y+2/3, -z+7/6' '-x+1/3, -x+y+2/3, -z+7/6' 'y+1/3, x+2/3, -z+7/6' '-x, -y, -z' 'y, -x+y, -z' 'x-y, x, -z' '-x+y, y, z-1/2' 'x, x-y, z-1/2' '-y, -x, z-1/2' '-x+2/3, -y+1/3, -z+1/3' 'y+2/3, -x+y+1/3, -z+1/3' 'x-y+2/3, x+1/3, -z+1/3' '-x+y+2/3, y+1/3, z-1/6' 'x+2/3, x-y+1/3, z-1/6' '-y+2/3, -x+1/3, z-1/6' '-x+1/3, -y+2/3, -z+2/3' 'y+1/3, -x+y+2/3, -z+2/3' 'x-y+1/3, x+2/3, -z+2/3' '-x+y+1/3, y+2/3, z+1/6' 'x+1/3, x-y+2/3, z+1/6' '-y+1/3, -x+2/3, z+1/6' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group C1 C 1.0288(3) 0.8613(4) 0.57880(6) 0.0384(12) Uani 1 1 d U . . C2 C 0.9703(3) 0.8274(3) 0.56273(6) 0.0329(11) Uani 1 1 d . . . C3 C 0.9327(3) 0.7543(3) 0.55271(6) 0.0405(12) Uani 1 1 d . . . C4 C 0.9244(4) 0.6647(4) 0.55183(7) 0.0493(14) Uani 1 1 d . . . C5 C 0.6589(5) 0.6341(5) 0.53292(9) 0.080(2) Uani 1 1 d . . . C6 C 0.6827(3) 0.6944(3) 0.51668(7) 0.0507(14) Uani 1 1 d . . . C7 C 0.6469(4) 0.7330(3) 0.50681(8) 0.0531(15) Uani 1 1 d . A . C8 C 0.5696(5) 0.7433(5) 0.50656(11) 0.084(2) Uani 1 1 d . . . Co1 Co 1.0000 1.0000 0.568599(13) 0.0309(3) Uani 1 3 d SU . . Co2 Co 0.82740(5) 0.66880(5) 0.522798(8) 0.0462(3) Uani 1 1 d U . . Co3 Co 0.0000 0.0000 0.5000 0.0527(5) Uani 1 6 d S . . Li1 Li 1.0365(10) 0.7031(10) 0.5833 0.076(5) Uani 1 2 d S . . N1 N 0.9479(2) 0.8830(3) 0.55575(5) 0.0334(9) Uani 1 1 d U . . N2 N 0.8947(3) 0.8461(3) 0.54197(5) 0.0466(11) Uani 1 1 d . . . N3 N 0.8865(2) 0.7679(3) 0.53990(5) 0.0407(10) Uani 1 1 d . . . N4 N 0.7613(2) 0.7161(3) 0.50950(6) 0.0447(10) Uani 1 1 d U . . N5 N 0.7761(3) 0.7663(3) 0.49545(6) 0.0529(13) Uani 1 1 d U A . N6 N 0.7081(3) 0.7774(3) 0.49362(5) 0.0549(12) Uani 1 1 d U . . O1 O 1.0477(2) 0.9377(2) 0.58336(4) 0.0422(9) Uani 1 1 d U . . O2 O 1.0505(3) 0.8139(3) 0.58693(4) 0.0598(11) Uani 1 1 d . . . O3 O 0.9620(3) 0.6421(3) 0.56327(5) 0.0724(12) Uani 1 1 d . . . O4 O 0.8781(2) 0.6164(2) 0.53922(4) 0.0492(9) Uani 1 1 d . . . O5 O 0.7167(3) 0.6150(2) 0.53717(5) 0.0591(10) Uani 1 1 d . . . O6 O 0.5871(3) 0.6076(4) 0.54031(7) 0.116(2) Uani 1 1 d . . . O7A O 0.5221(12) 0.7243(12) 0.5204(3) 0.096(7) Uani 0.74(4) 1 d P A 1 O7B O 0.4917(10) 0.6831(18) 0.5119(3) 0.048(7) Uani 0.26(4) 1 d P A 2 O8 O 0.5644(2) 0.7872(3) 0.49313(6) 0.0672(12) Uani 1 1 d . A . O9 O 0.11005(19) 0.04998(18) 0.48448(4) 0.0327(8) Uani 1 1 d . . . H9A H 0.1087 0.0852 0.4765 0.049 Uiso 1 1 d R . . H9B H 0.1579 0.0800 0.4907 0.049 Uiso 1 1 d R . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 C1 0.053(3) 0.051(3) 0.025(3) 0.010(2) 0.007(2) 0.037(3) C2 0.040(3) 0.048(3) 0.019(2) 0.012(2) 0.004(2) 0.029(2) C3 0.047(3) 0.066(4) 0.019(2) 0.009(2) 0.005(2) 0.036(3) C4 0.071(4) 0.051(3) 0.038(3) 0.013(3) 0.008(3) 0.039(3) C5 0.060(5) 0.084(5) 0.062(4) 0.005(4) 0.020(4) 0.010(4) C6 0.038(3) 0.041(3) 0.059(4) -0.011(3) 0.008(3) 0.009(3) C7 0.048(3) 0.042(3) 0.055(4) -0.007(3) 0.026(3) 0.012(3) C8 0.076(5) 0.073(5) 0.096(6) 0.021(4) 0.038(5) 0.032(4) Co1 0.0352(4) 0.0352(4) 0.0223(6) 0.000 0.000 0.0176(2) Co2 0.0505(5) 0.0522(5) 0.0322(4) -0.0133(3) -0.0094(3) 0.0230(4) Co3 0.0547(7) 0.0547(7) 0.0487(11) 0.000 0.000 0.0273(4) Li1 0.127(11) 0.127(11) 0.013(6) 0.006(3) -0.006(3) 0.093(12) N1 0.036(2) 0.0402(19) 0.024(2) 0.0090(15) 0.0111(18) 0.0198(18) N2 0.048(3) 0.074(3) 0.026(2) 0.017(2) 0.011(2) 0.037(3) N3 0.042(2) 0.061(3) 0.025(2) 0.004(2) -0.0006(19) 0.029(2) N4 0.027(2) 0.046(3) 0.046(3) -0.012(2) -0.0016(19) 0.0063(18) N5 0.044(3) 0.048(3) 0.054(3) -0.022(2) 0.015(2) 0.014(2) N6 0.063(3) 0.039(3) 0.041(3) -0.008(2) 0.023(2) 0.009(2) O1 0.044(2) 0.061(2) 0.0221(17) 0.0082(16) -0.0052(15) 0.0269(18) O2 0.089(3) 0.092(3) 0.0311(19) 0.003(2) -0.0098(19) 0.070(3) O3 0.110(3) 0.093(3) 0.042(2) 0.004(2) -0.015(2) 0.071(3) O4 0.072(2) 0.050(2) 0.0313(18) -0.0004(18) -0.0088(19) 0.035(2) O5 0.049(2) 0.060(3) 0.043(2) 0.0019(19) 0.0100(19) 0.009(2) O6 0.074(3) 0.166(5) 0.098(4) 0.051(4) 0.050(3) 0.052(3) O7A 0.094(9) 0.101(9) 0.101(11) 0.030(9) 0.072(9) 0.054(8) O7B 0.038(9) 0.046(13) 0.023(11) -0.008(8) 0.003(7) -0.007(8) O8 0.044(2) 0.076(3) 0.080(3) 0.006(2) 0.027(2) 0.028(2) O9 0.0344(17) 0.0365(18) 0.0267(17) 0.0113(14) -0.0011(14) 0.0175(15) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Co Co 0.3494 0.9721 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Li Li -0.0003 0.0001 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 O2 C1 O1 124.9(5) . . O2 C1 C2 120.9(5) . . O1 C1 C2 114.0(4) . . N1 C2 C3 106.8(4) . . N1 C2 C1 115.1(4) . . C3 C2 C1 138.2(4) . . C2 C3 N3 106.8(4) . . C2 C3 C4 139.8(5) . . N3 C3 C4 113.3(5) . . O4 C4 O3 124.6(5) . . O4 C4 C3 115.3(5) . . O3 C4 C3 120.1(5) . . O6 C5 O5 125.9(7) . . O6 C5 C6 119.8(7) . . O5 C5 C6 114.3(6) . . N4 C6 C7 107.3(5) . . N4 C6 C5 113.9(6) . . C7 C6 C5 138.7(6) . . C6 C7 N6 105.0(5) . . C6 C7 C8 139.6(6) . . N6 C7 C8 115.4(6) . . O7A C8 O7B 41.6(6) . . O7A C8 O8 124.6(8) . . O7B C8 O8 111.4(10) . . O7A C8 C7 118.9(10) . . O7B C8 C7 124.1(12) . . O8 C8 C7 115.2(6) . . O1 Co1 O1 92.00(14) 3_675 2_765 O1 Co1 O1 92.00(14) 3_675 . O1 Co1 O1 92.00(13) 2_765 . O1 Co1 N1 171.52(14) 3_675 2_765 O1 Co1 N1 79.63(15) 2_765 2_765 O1 Co1 N1 89.71(13) . 2_765 O1 Co1 N1 79.64(15) 3_675 3_675 O1 Co1 N1 89.71(13) 2_765 3_675 O1 Co1 N1 171.52(14) . 3_675 N1 Co1 N1 98.77(13) 2_765 3_675 O1 Co1 N1 89.71(13) 3_675 . O1 Co1 N1 171.52(14) 2_765 . O1 Co1 N1 79.64(15) . . N1 Co1 N1 98.77(13) 2_765 . N1 Co1 N1 98.77(13) 3_675 . N3 Co2 O8 173.20(16) . 21_656 N3 Co2 O4 80.59(15) . . O8 Co2 O4 92.91(16) 21_656 . N3 Co2 N4 97.18(16) . . O8 Co2 N4 89.55(16) 21_656 . O4 Co2 N4 170.38(16) . . N3 Co2 O5 90.78(15) . . O8 Co2 O5 91.17(17) 21_656 . O4 Co2 O5 89.53(17) . . N4 Co2 O5 81.11(18) . . N3 Co2 N6 96.86(17) . 21_656 O8 Co2 N6 81.14(18) 21_656 21_656 O4 Co2 N6 90.81(15) . 21_656 N4 Co2 N6 98.76(17) . 21_656 O5 Co2 N6 172.30(17) . 21_656 O9 Co3 O9 90.10(12) 21_556 20_556 O9 Co3 O9 90.10(12) 21_556 19_556 O9 Co3 O9 90.10(12) 20_556 19_556 O9 Co3 O9 89.90(12) 21_556 . O9 Co3 O9 89.90(12) 20_556 . O9 Co3 O9 179.993(2) 19_556 . O9 Co3 O9 179.993(1) 21_556 3 O9 Co3 O9 89.90(12) 20_556 3 O9 Co3 O9 89.90(12) 19_556 3 O9 Co3 O9 90.09(12) . 3 O9 Co3 O9 89.90(12) 21_556 2 O9 Co3 O9 179.993(2) 20_556 2 O9 Co3 O9 89.90(12) 19_556 2 O9 Co3 O9 90.09(12) . 2 O9 Co3 O9 90.09(12) 3 2 O2 Li1 O2 107.6(9) 18_545 . O2 Li1 O3 109.17(16) 18_545 . O2 Li1 O3 113.15(16) . . O2 Li1 O3 113.16(16) 18_545 18_545 O2 Li1 O3 109.19(16) . 18_545 O3 Li1 O3 104.7(9) . 18_545 C2 N1 N2 110.4(4) . . C2 N1 Co1 113.6(3) . . N2 N1 Co1 136.0(3) . . N3 N2 N1 106.6(4) . . N2 N3 C3 109.4(4) . . N2 N3 Co2 136.4(3) . . C3 N3 Co2 114.1(3) . . N5 N4 C6 110.3(4) . . N5 N4 Co2 136.1(3) . . C6 N4 Co2 113.6(4) . . N6 N5 N4 107.2(4) . . N5 N6 C7 110.2(5) . . N5 N6 Co2 137.7(4) . 20_566 C7 N6 Co2 112.1(4) . 20_566 C1 O1 Co1 117.7(3) . . C1 O2 Li1 134.9(4) . . C4 O3 Li1 132.6(4) . . C4 O4 Co2 116.5(3) . . C5 O5 Co2 117.0(4) . . C8 O8 Co2 115.9(4) . 20_566 Co3 O9 H9A 110.5 . . Co3 O9 H9B 111.1 . . H9A O9 H9B 107.9 . . loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 C1 O2 1.239(5) . C1 O1 1.258(6) . C1 C2 1.514(6) . C2 N1 1.333(5) . C2 C3 1.347(7) . C3 N3 1.362(6) . C3 C4 1.504(7) . C4 O4 1.269(6) . C4 O3 1.269(6) . C5 O6 1.238(8) . C5 O5 1.257(8) . C5 C6 1.542(9) . C6 N4 1.349(6) . C6 C7 1.358(8) . C7 N6 1.390(6) . C7 C8 1.453(9) . C8 O7A 1.281(11) . C8 O7B 1.306(17) . C8 O8 1.310(8) . Co1 O1 2.016(3) 3_675 Co1 O1 2.016(3) 2_765 Co1 O1 2.016(3) . Co1 N1 2.031(4) 2_765 Co1 N1 2.031(4) 3_675 Co1 N1 2.031(4) . Co2 N3 1.997(4) . Co2 O8 1.996(4) 21_656 Co2 O4 2.004(3) . Co2 N4 2.004(4) . Co2 O5 2.006(4) . Co2 N6 2.016(5) 21_656 Co3 O9 2.048(3) 21_556 Co3 O9 2.048(3) 20_556 Co3 O9 2.048(3) 19_556 Co3 O9 2.049(3) . Co3 O9 2.049(3) 3 Co3 O9 2.049(3) 2 Li1 O2 1.853(11) 18_545 Li1 O2 1.853(11) . Li1 O3 1.945(12) . Li1 O3 1.945(12) 18_545 N1 N2 1.336(5) . N2 N3 1.316(6) . N4 N5 1.325(6) . N5 N6 1.309(6) . N6 Co2 2.016(5) 20_566 O8 Co2 1.996(4) 20_566 O9 H9A 0.8744 . O9 H9B 0.8744 . loop_ _platon_squeeze_void_nr _platon_squeeze_void_average_x _platon_squeeze_void_average_y _platon_squeeze_void_average_z _platon_squeeze_void_volume _platon_squeeze_void_count_electrons _platon_squeeze_void_content 1 -0.005 0.495 0.002 9895 2467 ' '