#------------------------------------------------------------------------------ #$Date: 2014-06-05 09:11:24 +0300 (Thu, 05 Jun 2014) $ #$Revision: 115620 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/21/63/7216388.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7216388 loop_ _publ_author_name 'Owczarek, Magdalena' 'Majerz, Irena' 'Jakubas, Ryszard' _publ_section_title ; Weak hydrogen and dihydrogen bonds instead of strong N--H⋯O bonds of a tricyclic [1,2,4,5]-tetrazine derivative. Single-crystal X-ray diffraction, theoretical calculations and Hirshfeld surface analysis ; _journal_name_full CrystEngComm _journal_paper_doi 10.1039/c4ce00571f _journal_year 2014 _chemical_formula_moiety 'C8 H16 N4 O2, H2 O' _chemical_formula_sum 'C8 H18 N4 O3' _chemical_formula_weight 218.26 _chemical_name_systematic ; ? ; _space_group_IT_number 15 _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 1 2/c 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 115.56(3) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 19.088(5) _cell_length_b 4.672(3) _cell_length_c 12.691(5) _cell_measurement_temperature 100(2) _cell_volume 1021.0(9) _computing_cell_refinement ; CrysAlis RED, Oxford Diffraction Ltd., Version 1.171.33.66 (release 28-04-2010 CrysAlis171 .NET) (compiled Apr 28 2010,14:27:37) ; _computing_data_collection ; CrysAlis CCD, Oxford Diffraction Ltd., Version 1.171.33.66 (release 28-04-2010 CrysAlis171 .NET) (compiled Apr 28 2010,14:27:37) ; _computing_data_reduction ; CrysAlis RED, Oxford Diffraction Ltd., Version 1.171.33.66 (release 28-04-2010 CrysAlis171 .NET) (compiled Apr 28 2010,14:27:37) ; _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 100(2) _diffrn_detector_area_resol_mean 8.3359 _diffrn_measured_fraction_theta_full 0.999 _diffrn_measured_fraction_theta_max 0.933 _diffrn_measurement_device_type 'Xcalibur, Sapphire2, large Be window' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0206 _diffrn_reflns_av_unetI/netI 0.0161 _diffrn_reflns_limit_h_max 29 _diffrn_reflns_limit_h_min -31 _diffrn_reflns_limit_k_max 6 _diffrn_reflns_limit_k_min -7 _diffrn_reflns_limit_l_max 21 _diffrn_reflns_limit_l_min -20 _diffrn_reflns_number 8486 _diffrn_reflns_theta_full 25.00 _diffrn_reflns_theta_max 36.70 _diffrn_reflns_theta_min 3.32 _exptl_absorpt_coefficient_mu 0.109 _exptl_absorpt_correction_type none _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.420 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 472 _exptl_crystal_size_max 0.60 _exptl_crystal_size_mid 0.25 _exptl_crystal_size_min 0.24 _refine_diff_density_max 0.497 _refine_diff_density_min -0.262 _refine_diff_density_rms 0.070 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.068 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 69 _refine_ls_number_reflns 2375 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.068 _refine_ls_R_factor_all 0.0432 _refine_ls_R_factor_gt 0.0372 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0707P)^2^+0.1903P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1083 _refine_ls_wR_factor_ref 0.1116 _reflns_number_gt 1970 _reflns_number_total 2375 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file c4ce00571f2.cif _[local]_cod_data_source_block owczq _[local]_cod_cif_authors_sg_H-M 'C 2/c' _cod_original_cell_volume 1021.0(8) _cod_database_code 7216388 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z+1/2' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y, z-1/2' '-x+1/2, -y+1/2, -z' 'x+1/2, -y+1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags N1 N 0.43122(3) 0.90282(10) 0.50012(4) 0.01041(10) Uani 1 1 d . C3 C 0.43498(3) 1.16886(12) 0.44064(5) 0.01039(11) Uani 1 1 d . H3A H 0.4473 1.3327 0.4965 0.012 Uiso 1 1 calc R N2 N 0.50482(3) 0.85457(11) 0.60046(4) 0.01100(10) Uani 1 1 d . O1 O 0.29667(3) 1.23776(10) 0.37639(4) 0.01619(11) Uani 1 1 d . C2 C 0.36976(3) 0.92270(13) 0.53955(5) 0.01358(11) Uani 1 1 d . H2A H 0.3811 1.0806 0.5966 0.016 Uiso 1 1 calc R H2B H 0.3667 0.7420 0.5781 0.016 Uiso 1 1 calc R C4 C 0.35642(3) 1.21977(13) 0.33776(5) 0.01420(12) Uani 1 1 d . H4A H 0.3581 1.3998 0.2978 0.017 Uiso 1 1 calc R H4B H 0.3449 1.0610 0.2810 0.017 Uiso 1 1 calc R C1 C 0.29335(3) 0.97818(13) 0.43404(6) 0.01562(12) Uani 1 1 d . H1A H 0.2815 0.8160 0.3788 0.019 Uiso 1 1 calc R H1B H 0.2511 0.9917 0.4593 0.019 Uiso 1 1 calc R O1W O 0.5000 0.39736(14) 0.7500 0.01891(14) Uani 1 2 d S HN2 H 0.5157 1.0094 0.6486 0.023 Uiso 1 1 d R H1W H 0.5021 0.5142 0.6994 0.028 Uiso 1 1 d R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 N1 0.0093(2) 0.0105(2) 0.01110(19) 0.00131(15) 0.00410(14) -0.00050(14) C3 0.0106(2) 0.0096(2) 0.0109(2) 0.00090(16) 0.00461(16) -0.00017(15) N2 0.0105(2) 0.0123(2) 0.01007(19) 0.00101(15) 0.00434(14) 0.00022(14) O1 0.0122(2) 0.0149(2) 0.0217(2) 0.00346(15) 0.00760(16) 0.00217(14) C2 0.0122(2) 0.0145(2) 0.0158(2) 0.00100(18) 0.00771(18) -0.00114(17) C4 0.0115(2) 0.0161(3) 0.0138(2) 0.00246(18) 0.00426(17) 0.00140(17) C1 0.0112(2) 0.0143(2) 0.0211(3) 0.0010(2) 0.00671(19) -0.00092(17) O1W 0.0319(4) 0.0114(3) 0.0154(3) 0.000 0.0120(2) 0.000 loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 N2 N1 C2 109.00(5) . . N2 N1 C3 109.78(4) . . C2 N1 C3 110.21(5) . . N2 C3 N1 109.93(5) 5_676 . N2 C3 C4 109.98(5) 5_676 . N1 C3 C4 108.88(5) . . N2 C3 H3A 109.3 5_676 . N1 C3 H3A 109.3 . . C4 C3 H3A 109.3 . . N1 N2 C3 108.20(5) . 5_676 N1 N2 HN2 108.7 . . C3 N2 HN2 108.2 5_676 . C4 O1 C1 110.14(5) . . N1 C2 C1 108.44(5) . . N1 C2 H2A 110.0 . . C1 C2 H2A 110.0 . . N1 C2 H2B 110.0 . . C1 C2 H2B 110.0 . . H2A C2 H2B 108.4 . . O1 C4 C3 110.63(5) . . O1 C4 H4A 109.5 . . C3 C4 H4A 109.5 . . O1 C4 H4B 109.5 . . C3 C4 H4B 109.5 . . H4A C4 H4B 108.1 . . O1 C1 C2 110.98(5) . . O1 C1 H1A 109.4 . . C2 C1 H1A 109.4 . . O1 C1 H1B 109.4 . . C2 C1 H1B 109.4 . . H1A C1 H1B 108.0 . . loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 N1 N2 1.4500(9) . N1 C2 1.4635(8) . N1 C3 1.4720(10) . C3 N2 1.4565(8) 5_676 C3 C4 1.5234(11) . C3 H3A 1.0000 . N2 C3 1.4565(8) 5_676 N2 HN2 0.9112 . O1 C4 1.4251(8) . O1 C1 1.4318(10) . C2 C1 1.5173(11) . C2 H2A 0.9900 . C2 H2B 0.9900 . C4 H4A 0.9900 . C4 H4B 0.9900 . C1 H1A 0.9900 . C1 H1B 0.9900 . O1W H1W 0.8565 . loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A N2 HN2 O1W 0.91 2.32 3.1924(15) 161.3 1_565 O1W H1W N2 0.86 2.04 2.8851(13) 168.4 .