#------------------------------------------------------------------------------ #$Date: 2016-05-18 06:01:21 +0300 (Wed, 18 May 2016) $ #$Revision: 183001 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/22/52/7225253.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7225253 loop_ _publ_author_name 'Du, Peiyao' 'Gu, Wen' 'Liu, Xin' _publ_section_title ; Three Types of Lanthanide Coordination Polymers from 1D-3D Based on a Tetracarboxylate Ligand: Synthesis, Structural Diversities and Properties ; _journal_name_full CrystEngComm _journal_paper_doi 10.1039/C6CE00600K _journal_year 2016 _chemical_formula_sum 'C34 H36 Dy N5 O22' _chemical_formula_weight 1029.17 _chemical_name_systematic ; ? ; _space_group_IT_number 11 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yb' _symmetry_space_group_name_H-M 'P 1 21/m 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _audit_update_record ; 2016-05-17 deposited with the CCDC. 2016-05-17 downloaded from the CCDC. ; _cell_angle_alpha 90.00 _cell_angle_beta 98.89(3) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 7.6510(15) _cell_length_b 21.538(4) _cell_length_c 12.283(3) _cell_measurement_reflns_used 6220 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 26.50 _cell_measurement_theta_min 1.93 _cell_volume 1999.8(7) _computing_cell_refinement SMART _computing_data_collection 'SMART (Bruker, 2000)' _computing_data_reduction 'SAINT (Bruker, 2000)' _computing_molecular_graphics SHELXTL _computing_publication_material SHELXTL _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.998 _diffrn_measured_fraction_theta_max 0.998 _diffrn_measurement_device_type 'Bruker Smart Apex CCD area detector' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0489 _diffrn_reflns_av_sigmaI/netI 0.0359 _diffrn_reflns_limit_h_max 9 _diffrn_reflns_limit_h_min -9 _diffrn_reflns_limit_k_max 26 _diffrn_reflns_limit_k_min -27 _diffrn_reflns_limit_l_max 15 _diffrn_reflns_limit_l_min -15 _diffrn_reflns_number 21254 _diffrn_reflns_theta_full 26.50 _diffrn_reflns_theta_max 26.50 _diffrn_reflns_theta_min 1.93 _exptl_absorpt_coefficient_mu 1.946 _exptl_absorpt_correction_T_max 0.776 _exptl_absorpt_correction_T_min 0.712 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details SADABS _exptl_crystal_colour orange _exptl_crystal_density_diffrn 1.710 _exptl_crystal_density_meas ? _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 1034 _exptl_crystal_size_max 0.20 _exptl_crystal_size_mid 0.15 _exptl_crystal_size_min 0.13 _platon_squeeze_details ; The SQUEEZE routine of PLATON was applied to remove the diffraction contribution from guests to give a set of solvent-free diffraction intensities. SQUEEZE estimated a total count of 89 electrons per unit cell. This corresponds with 89/4=22.25 electrons per asymmetric unit. As the formula unit is composed of 2 asymmetric units (Z = 2), this then implies that 44.5 electrons removed by SQUEEZE should be associated with the formula unit. As there are 10 electrons with a water molecule, the logical deduction is that some 4.5 water molecules should be added to the formula unit. The remaining solvent molecules were disordered and assigned as five H2O molecule according to the TGA and elemental analysis results, as the formula unit. This discrepancy might be owing to the moderate quality of low angle data caused by the highly disordered framework. ; _refine_diff_density_max 6.990 _refine_diff_density_min -3.690 _refine_diff_density_rms 0.301 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.084 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 272 _refine_ls_number_reflns 4263 _refine_ls_number_restraints 34 _refine_ls_restrained_S_all 1.110 _refine_ls_R_factor_all 0.0743 _refine_ls_R_factor_gt 0.0715 _refine_ls_shift/su_max 0.004 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.1012P)^2^+35.1557P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1849 _refine_ls_wR_factor_ref 0.1877 _reflns_number_gt 4020 _reflns_number_total 4263 _reflns_threshold_expression >2sigma(I) _cod_data_source_file c6ce00600k2.cif _cod_data_source_block 1 _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /usr/data/users/saulius/crontab/automatic-downloads/rss-feeds/RSC/lib/dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.2 from 2011-04-26. '_exptl_crystal_density_meas' value 'none' was changed to '?' - the value is perceived as not measured. Automatic conversion script Id: cif_fix_values 4268 2015-11-12 08:31:59Z antanas ; _cod_original_cell_volume 1999.7(7) _cod_original_sg_symbol_H-M p21/m _cod_database_code 7225253 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z' '-x, -y, -z' 'x, -y-1/2, z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group Dy1 Dy 0.58396(6) 0.7500 0.23315(4) 0.00992(19) Uani 1 2 d SD . . O1 O 0.3752(7) 0.6756(3) 0.1965(5) 0.0211(12) Uani 1 1 d . . . O2 O 0.2029(8) 0.6328(3) 0.0567(4) 0.0193(12) Uani 1 1 d . . . C1 C 0.3153(9) 0.6291(3) 0.1418(6) 0.0125(14) Uani 1 1 d . . . C2 C 0.3864(9) 0.5665(3) 0.1824(6) 0.0124(14) Uani 1 1 d . . . C3 C 0.3590(10) 0.5137(3) 0.1161(6) 0.0130(14) Uani 1 1 d . . . H3 H 0.2901 0.5163 0.0469 0.016 Uiso 1 1 calc R . . C4 C 0.4341(10) 0.4570(4) 0.1528(6) 0.0149(14) Uani 1 1 d . . . C5 C 0.5367(11) 0.4526(4) 0.2561(6) 0.0183(15) Uani 1 1 d . . . H5 H 0.5889 0.4150 0.2802 0.022 Uiso 1 1 calc R . . C6 C 0.5606(11) 0.5046(4) 0.3230(6) 0.0189(16) Uani 1 1 d . . . C7 C 0.4851(11) 0.5611(4) 0.2868(6) 0.0189(16) Uani 1 1 d . . . H7 H 0.5007 0.5955 0.3329 0.023 Uiso 1 1 calc R . . C8 C 0.4038(10) 0.4009(4) 0.0814(6) 0.0160(15) Uani 1 1 d . . . O3 O 0.2861(9) 0.4107(3) -0.0070(5) 0.0232(13) Uani 1 1 d . . . H3A H 0.2919 0.3828 -0.0517 0.035 Uiso 1 1 calc R . . O4 O 0.4796(8) 0.3519(3) 0.1027(5) 0.0222(12) Uani 1 1 d . . . N1 N 0.6645(10) 0.5062(4) 0.4302(6) 0.0286(18) Uani 1 1 d . . . N2 N 0.7496(12) 0.4573(4) 0.4563(6) 0.033(2) Uani 1 1 d U . . C9 C 1.1667(18) 0.3461(6) 0.7276(9) 0.054(3) Uani 1 1 d U . . O5 O 1.2138(17) 0.3157(5) 0.6504(8) 0.092(3) Uani 1 1 d U . . O6 O 1.2379(7) 0.3350(2) 0.8244(4) 0.0150(11) Uani 1 1 d . . . C10 C 1.0584(15) 0.4031(5) 0.6965(8) 0.039(3) Uani 1 1 d . . . C11 C 1.0661(11) 0.4536(4) 0.7676(7) 0.0229(18) Uani 1 1 d . . . H11 H 1.1326 0.4512 0.8376 0.027 Uiso 1 1 calc R . . C12 C 0.9742(11) 0.5078(4) 0.7340(6) 0.0181(16) Uani 1 1 d . . . C13 C 0.8683(11) 0.5111(4) 0.6314(6) 0.0216(17) Uani 1 1 d . . . H13 H 0.8070 0.5474 0.6090 0.026 Uiso 1 1 calc R . . C14 C 0.8553(14) 0.4595(5) 0.5629(7) 0.034(2) Uani 1 1 d . . . C15 C 0.9526(17) 0.4067(6) 0.5936(8) 0.051(4) Uani 1 1 d . . . H15 H 0.9476 0.3733 0.5452 0.061 Uiso 1 1 calc R . . C16 C 0.9930(10) 0.5637(4) 0.8074(6) 0.0169(15) Uani 1 1 d U . . O7 O 1.0927(10) 0.5517(3) 0.9021(5) 0.0344(17) Uani 1 1 d . . . H7A H 1.1130 0.5840 0.9371 0.052 Uiso 1 1 calc R . . O8 O 0.9237(8) 0.6132(3) 0.7835(5) 0.0237(13) Uani 1 1 d . . . O9 O 0.5305(11) 0.7500 0.0344(6) 0.0156(15) Uani 1 2 d SD . . H9 H 0.555(12) 0.7179(5) -0.001(4) 0.023 Uiso 1 1 d D . . C17 C 0.1502(16) 0.7500 0.8503(10) 0.024(2) Uani 1 2 d S . . H17A H 0.1238 0.7097 0.8184 0.036 Uiso 0.50 1 calc PR A -1 H17B H 0.2723 0.7597 0.8490 0.036 Uiso 0.50 1 calc PR A -1 H17C H 0.0767 0.7806 0.8087 0.036 Uiso 0.50 1 calc PR A -1 N3 N 0.1160(11) 0.7500 0.9650(8) 0.0151(18) Uani 1 2 d S . . H3B H 0.1661 0.7838 0.9999 0.018 Uiso 0.50 1 calc PR . . H3C H 0.1661 0.7162 0.9999 0.018 Uiso 0.50 1 calc PR . . C18 C -0.0784(16) 0.7500 0.9704(12) 0.027(3) Uani 1 2 d S . . H18A H -0.1282 0.7893 0.9452 0.041 Uiso 0.50 1 calc PR B -1 H18B H -0.0965 0.7432 1.0451 0.041 Uiso 0.50 1 calc PR B -1 H18C H -0.1348 0.7175 0.9244 0.041 Uiso 0.50 1 calc PR B -1 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Dy1 0.0126(3) 0.0060(3) 0.0099(3) 0.000 -0.00218(17) 0.000 O1 0.016(3) 0.010(3) 0.035(3) -0.003(2) -0.003(2) -0.003(2) O2 0.027(3) 0.012(3) 0.017(3) 0.002(2) -0.006(2) 0.003(2) C1 0.012(3) 0.011(3) 0.015(3) 0.000(3) 0.002(3) -0.002(3) C2 0.013(3) 0.009(3) 0.014(3) -0.001(3) -0.002(3) 0.000(3) C3 0.016(3) 0.013(3) 0.009(3) -0.001(3) -0.001(3) -0.002(3) C4 0.020(4) 0.013(4) 0.011(3) -0.001(3) 0.001(3) 0.002(3) C5 0.025(4) 0.014(4) 0.014(3) -0.002(3) -0.003(3) 0.006(3) C6 0.023(4) 0.020(4) 0.012(3) -0.004(3) -0.004(3) 0.011(3) C7 0.021(4) 0.017(4) 0.016(4) -0.009(3) -0.006(3) 0.004(3) C8 0.022(4) 0.014(4) 0.012(3) 0.002(3) 0.000(3) 0.004(3) O3 0.038(3) 0.012(3) 0.016(3) -0.004(2) -0.007(2) 0.006(2) O4 0.033(3) 0.011(3) 0.019(3) -0.004(2) -0.005(2) 0.007(2) N1 0.034(4) 0.030(4) 0.016(3) -0.010(3) -0.014(3) 0.018(3) N2 0.044(4) 0.034(4) 0.015(3) -0.010(3) -0.016(3) 0.027(4) C9 0.071(6) 0.051(5) 0.029(4) -0.026(4) -0.026(4) 0.044(5) O5 0.122(6) 0.084(5) 0.052(4) -0.036(4) -0.040(4) 0.077(5) O6 0.017(3) 0.011(2) 0.015(2) -0.001(2) -0.003(2) 0.004(2) C10 0.052(6) 0.039(6) 0.017(4) -0.016(4) -0.018(4) 0.033(5) C11 0.028(4) 0.027(4) 0.011(3) -0.005(3) -0.006(3) 0.012(4) C12 0.023(4) 0.018(4) 0.011(3) -0.002(3) -0.004(3) 0.010(3) C13 0.023(4) 0.024(4) 0.015(4) -0.003(3) -0.004(3) 0.014(3) C14 0.043(5) 0.041(6) 0.012(4) -0.009(4) -0.013(4) 0.031(5) C15 0.068(8) 0.049(7) 0.024(5) -0.023(5) -0.026(5) 0.050(6) C16 0.019(3) 0.017(4) 0.014(3) 0.001(3) 0.001(3) 0.003(3) O7 0.054(4) 0.020(3) 0.022(3) -0.009(3) -0.017(3) 0.018(3) O8 0.030(3) 0.014(3) 0.024(3) 0.001(2) -0.004(2) 0.003(2) O9 0.024(4) 0.011(3) 0.010(3) 0.000 -0.003(3) 0.000 C17 0.022(6) 0.031(7) 0.020(6) 0.000 0.003(5) 0.000 N3 0.012(4) 0.011(4) 0.022(5) 0.000 0.001(3) 0.000 C18 0.022(6) 0.023(6) 0.036(7) 0.000 0.004(5) 0.000 loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Dy Dy -0.1892 4.4098 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 O1 Dy1 O1 90.4(3) . 4_575 O1 Dy1 O5 155.3(3) . 2_756 O1 Dy1 O5 94.1(4) 4_575 2_756 O1 Dy1 O5 94.1(4) . 3_766 O1 Dy1 O5 155.3(3) 4_575 3_766 O5 Dy1 O5 72.3(6) 2_756 3_766 O1 Dy1 O9 78.1(2) . . O1 Dy1 O9 78.1(2) 4_575 . O5 Dy1 O9 126.6(3) 2_756 . O5 Dy1 O9 126.6(3) 3_766 . O1 Dy1 O6 79.62(19) . 3_766 O1 Dy1 O6 151.7(2) 4_575 3_766 O5 Dy1 O6 106.0(4) 2_756 3_766 O5 Dy1 O6 52.8(3) 3_766 3_766 O9 Dy1 O6 73.91(17) . 3_766 O1 Dy1 O6 151.7(2) . 2_756 O1 Dy1 O6 79.62(19) 4_575 2_756 O5 Dy1 O6 52.8(3) 2_756 2_756 O5 Dy1 O6 106.0(4) 3_766 2_756 O9 Dy1 O6 73.91(17) . 2_756 O6 Dy1 O6 96.7(3) 3_766 2_756 O1 Dy1 C9 177.4(3) . 2_756 O1 Dy1 C9 87.2(4) 4_575 2_756 O5 Dy1 C9 26.3(3) 2_756 2_756 O5 Dy1 C9 88.5(4) 3_766 2_756 O9 Dy1 C9 100.3(3) . 2_756 O6 Dy1 C9 101.9(4) 3_766 2_756 O6 Dy1 C9 26.5(2) 2_756 2_756 O1 Dy1 C9 87.2(4) . 3_766 O1 Dy1 C9 177.4(3) 4_575 3_766 O5 Dy1 C9 88.5(4) 2_756 3_766 O5 Dy1 C9 26.3(3) 3_766 3_766 O9 Dy1 C9 100.3(3) . 3_766 O6 Dy1 C9 26.5(2) 3_766 3_766 O6 Dy1 C9 101.9(4) 2_756 3_766 C9 Dy1 C9 95.1(6) 2_756 3_766 C1 O1 Dy1 149.7(5) . . O2 C1 O1 123.1(7) . . O2 C1 C2 120.0(6) . . O1 C1 C2 116.9(6) . . C7 C2 C3 118.7(7) . . C7 C2 C1 119.9(7) . . C3 C2 C1 121.4(6) . . C4 C3 C2 120.6(7) . . C5 C4 C3 120.1(7) . . C5 C4 C8 119.8(7) . . C3 C4 C8 120.1(6) . . C6 C5 C4 119.4(7) . . C5 C6 C7 120.5(7) . . C5 C6 N1 124.7(7) . . C7 C6 N1 114.8(7) . . C2 C7 C6 120.7(7) . . O4 C8 O3 124.1(7) . . O4 C8 C4 123.6(7) . . O3 C8 C4 112.3(6) . . N2 N1 C6 114.2(7) . . N1 N2 C14 113.9(7) . . O5 C9 O6 119.1(9) . . O5 C9 C10 116.7(10) . . O6 C9 C10 122.7(8) . . O5 C9 Dy1 58.4(6) . 3_766 O6 C9 Dy1 60.8(5) . 3_766 C10 C9 Dy1 169.6(11) . 3_766 C9 O5 Dy1 95.3(7) . 3_766 C9 O6 Dy1 92.7(5) . 3_766 C11 C10 C15 119.3(8) . . C11 C10 C9 120.9(8) . . C15 C10 C9 119.8(8) . . C10 C11 C12 119.9(7) . . C13 C12 C11 120.6(7) . . C13 C12 C16 119.5(7) . . C11 C12 C16 119.9(7) . . C14 C13 C12 119.0(7) . . C15 C14 C13 120.7(8) . . C15 C14 N2 115.3(8) . . C13 C14 N2 124.0(8) . . C14 C15 C10 120.3(9) . . O8 C16 O7 124.2(7) . . O8 C16 C12 124.5(7) . . O7 C16 C12 111.3(7) . . C17 N3 C18 111.5(9) . . loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 Dy1 O1 2.258(5) . Dy1 O1 2.258(5) 4_575 Dy1 O5 2.400(9) 2_756 Dy1 O5 2.400(9) 3_766 Dy1 O9 2.412(7) . Dy1 O6 2.452(5) 3_766 Dy1 O6 2.452(5) 2_756 Dy1 C9 2.805(10) 2_756 Dy1 C9 2.805(10) 3_766 O1 C1 1.253(9) . O2 C1 1.249(9) . C1 C2 1.508(10) . C2 C7 1.389(10) . C2 C3 1.396(10) . C3 C4 1.394(10) . C4 C5 1.389(10) . C4 C8 1.490(10) . C5 C6 1.385(11) . C6 C7 1.390(11) . C6 N1 1.428(9) . C8 O4 1.214(10) . C8 O3 1.316(9) . N1 N2 1.252(11) . N2 C14 1.430(10) . C9 O5 1.250(14) . C9 O6 1.252(12) . C9 C10 1.498(13) . C9 Dy1 2.805(10) 3_766 O5 Dy1 2.400(9) 3_766 O6 Dy1 2.452(5) 3_766 C10 C11 1.390(12) . C10 C15 1.395(12) . C11 C12 1.393(11) . C12 C13 1.390(10) . C12 C16 1.497(11) . C13 C14 1.388(12) . C14 C15 1.380(13) . C16 O8 1.206(10) . C16 O7 1.315(10) . C17 N3 1.472(15) . N3 C18 1.499(15) . loop_ _platon_squeeze_void_nr _platon_squeeze_void_average_x _platon_squeeze_void_average_y _platon_squeeze_void_average_z _platon_squeeze_void_volume _platon_squeeze_void_count_electrons _platon_squeeze_void_content 1 -0.022 0.250 0.432 199 44 ' ' 2 -0.020 0.750 0.568 199 45 ' '