#------------------------------------------------------------------------------ #$Date: 2019-10-22 06:19:38 +0300 (Tue, 22 Oct 2019) $ #$Revision: 219452 $ #$URL: file:///home/coder/svn-repositories/cod/cif/7/23/47/7234736.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_7234736 loop_ _publ_author_name 'Fawzy, Nehmedo G.' 'Panda, Siva S.' 'Fayad, Walid' 'Shalaby, ElSayed M.' 'Srour, Aladdin M.' 'Girgis, Adel S.' _publ_section_title ; Synthesis, human topoisomerase II\a inhibitory properties and molecular modeling studies of anti-proliferative curcumin mimics ; _journal_issue 58 _journal_name_full 'RSC Advances' _journal_page_first 33761 _journal_paper_doi 10.1039/C9RA05661K _journal_volume 9 _journal_year 2019 _chemical_formula_moiety 'C26 H21 Cl1 N2 O2' _chemical_formula_sum 'C26 H21 Cl N2 O2' _chemical_formula_weight 428.90 _space_group_IT_number 15 _space_group_name_Hall '-C 2yc' _space_group_name_H-M_alt 'C 1 2/c 1' _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 1 2/c 1' _atom_sites_solution_hydrogens difmap _atom_sites_solution_primary direct _audit_update_record ; 2018-07-12 deposited with the CCDC. 2019-10-14 downloaded from the CCDC. ; _cell_angle_alpha 90 _cell_angle_beta 107.491(3) _cell_angle_gamma 90 _cell_formula_units_Z 8 _cell_length_a 26.930(3) _cell_length_b 12.9179(18) _cell_length_c 12.9500(14) _cell_measurement_reflns_used 1012 _cell_measurement_temperature 293 _cell_measurement_theta_max 26 _cell_measurement_theta_min 2 _cell_volume 4296.7(9) _computing_cell_refinement 'USER DEFINED CELL REFINEMENT' _computing_data_collection 'USER DEFINED DATA COLLECTION' _computing_data_reduction 'USER DEFINED DATA REDUCTION' _computing_molecular_graphics 'CAMERON (Watkin et al., 1996)' _computing_publication_material 'CRYSTALS (Betteridge et al., 2003)' _computing_structure_refinement 'CRYSTALS (Betteridge et al., 2003)' _computing_structure_solution 'SIR92 (Altomare et al., 1994)' _diffrn_ambient_temperature 293 _diffrn_measured_fraction_theta_full 0.997 _diffrn_measured_fraction_theta_max 0.997 _diffrn_measurement_device Serial _diffrn_measurement_device_type Unknown _diffrn_measurement_method \w/2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_type 'Mo K\a' _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.036 _diffrn_reflns_limit_h_max 29 _diffrn_reflns_limit_h_min -28 _diffrn_reflns_limit_k_max 13 _diffrn_reflns_limit_k_min -12 _diffrn_reflns_limit_l_max 14 _diffrn_reflns_limit_l_min -14 _diffrn_reflns_number 11327 _diffrn_reflns_theta_full 26.678 _diffrn_reflns_theta_max 26.678 _diffrn_reflns_theta_min 1.765 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 0.204 _exptl_absorpt_correction_type none _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.326 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prismatic _exptl_crystal_F_000 1792 _exptl_crystal_size_max 0.28 _exptl_crystal_size_mid 0.18 _exptl_crystal_size_min 0.14 _refine_diff_density_max 0.13 _refine_diff_density_min -0.16 _refine_ls_extinction_coef 45(5) _refine_ls_extinction_method 'Larson (1970), Equation 22' _refine_ls_goodness_of_fit_ref 0.9493 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 173 _refine_ls_number_reflns 1790 _refine_ls_number_restraints 0 _refine_ls_R_factor_all 0.0787 _refine_ls_R_factor_gt 0.0386 _refine_ls_shift/su_max 0.0007524 _refine_ls_shift/su_mean 0.0000484 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details ; Method, part 1, Chebychev polynomial, (Watkin, 1994, Prince, 1982) [weight] = 1.0/[A~0~*T~0~(x)+A~1~*T~1~(x) ... +A~n-1~]*T~n-1~(x)] where A~i~ are the Chebychev coefficients listed below and x= Fcalc/Fmax Method = Robust Weighting (Prince, 1982) W = [weight] * [1-(deltaF/6*sigmaF)^2^]^2^ A~i~ are: 8.00 13.1 7.72 3.14 0.675 ; _refine_ls_weighting_scheme calc _refine_ls_wR_factor_all 0.1038 _refine_ls_wR_factor_gt 0.0771 _refine_ls_wR_factor_ref 0.0771 _reflns_limit_h_max 27 _reflns_limit_h_min -29 _reflns_limit_k_max 13 _reflns_limit_k_min 0 _reflns_limit_l_max 14 _reflns_limit_l_min 0 _reflns_number_gt 1790 _reflns_number_total 2861 _reflns_threshold_expression I>2.0\s(I) _oxford_diffrn_Wilson_B_factor 4.41 _oxford_diffrn_Wilson_scale 759.37 _oxford_refine_ls_r_factor_ref 0.0386 _oxford_refine_ls_scale 0.064462(16) _oxford_reflns_number_all 2843 _oxford_reflns_threshold_expression_ref I>2.0\s(I) _cod_data_source_file c9ra05661k2.cif _cod_data_source_block 25 _cod_original_cell_volume 4296.7(5) _cod_original_sg_symbol_H-M 'C 1 2/c 1 ' _cod_original_formula_sum 'C26 H21 Cl1 N2 O2' _cod_database_code 7234736 loop_ _symmetry_equiv_pos_as_xyz x,y,z -x,-y,-z x+1/2,y+1/2,z -x+1/2,-y+1/2,-z -x,y,-z+1/2 x,-y,z+1/2 -x+1/2,y+1/2,-z+1/2 x+1/2,-y+1/2,z+1/2 loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_occupancy _atom_site_adp_type _atom_site_refinement_flags_posn O1 O 0.22803(8) 0.2156(2) 0.12978(18) 0.0674 1.0000 Uani . O2 O 0.16374(8) 0.28805(19) 0.49669(17) 0.0610 1.0000 Uani . N1 N 0.30443(9) 0.2330(2) 0.26555(19) 0.0477 1.0000 Uani D N2 N 0.23023(9) 0.3246(2) 0.26672(19) 0.0533 1.0000 Uani . C1 C 0.38112(11) 0.1287(3) 0.2955(2) 0.0481 1.0000 Uani . C2 C 0.41469(12) 0.0675(3) 0.2597(3) 0.0521 1.0000 Uani . C3 C 0.40317(12) 0.0450(3) 0.1511(3) 0.0488 1.0000 Uani . C4 C 0.35879(12) 0.0843(3) 0.0791(3) 0.0539 1.0000 Uani . C5 C 0.32515(12) 0.1464(3) 0.1142(2) 0.0518 1.0000 Uani . C6 C 0.33603(11) 0.1686(2) 0.2237(2) 0.0409 1.0000 Uani D C7 C 0.25314(12) 0.2561(3) 0.2154(2) 0.0461 1.0000 Uani D C8 C 0.25465(12) 0.3918(3) 0.3575(2) 0.0512 1.0000 Uani . C9 C 0.17457(11) 0.3423(3) 0.2251(2) 0.0533 1.0000 Uani . C10 C 0.05733(12) 0.3044(3) 0.0898(3) 0.0597 1.0000 Uani . C11 C 0.02031(15) 0.2819(3) -0.0076(3) 0.0782 1.0000 Uani . C12 C -0.00906(16) 0.1939(4) -0.0179(3) 0.0868 1.0000 Uani . C13 C -0.00206(16) 0.1271(4) 0.0678(4) 0.0850 1.0000 Uani . C14 C 0.03478(13) 0.1504(3) 0.1649(3) 0.0692 1.0000 Uani . C15 C 0.06569(12) 0.2388(3) 0.1780(3) 0.0521 1.0000 Uani . C16 C 0.10333(12) 0.2586(3) 0.2849(2) 0.0529 1.0000 Uani . C17 C 0.14954(12) 0.3065(3) 0.3078(2) 0.0459 1.0000 Uani . C18 C 0.18055(12) 0.3205(3) 0.4240(2) 0.0460 1.0000 Uani . C19 C 0.23095(11) 0.3772(2) 0.4485(2) 0.0447 1.0000 Uani . C20 C 0.25266(12) 0.4132(2) 0.5493(2) 0.0497 1.0000 Uani . C21 C 0.30002(13) 0.4734(3) 0.5952(2) 0.0508 1.0000 Uani . C22 C 0.32389(14) 0.4707(3) 0.7075(3) 0.0612 1.0000 Uani . C23 C 0.36831(16) 0.5268(3) 0.7551(3) 0.0775 1.0000 Uani . C24 C 0.39033(16) 0.5872(3) 0.6928(4) 0.0797 1.0000 Uani . C25 C 0.36730(17) 0.5931(3) 0.5835(3) 0.0818 1.0000 Uani . C26 C 0.32256(15) 0.5363(3) 0.5357(3) 0.0684 1.0000 Uani . Cl1 Cl 0.44468(3) -0.03383(8) 0.10479(8) 0.0694 1.0000 Uani . H21 H 0.4457 0.0408 0.3089 0.0655 1.0000 Uiso R H11 H 0.3888 0.1442 0.3704 0.0579 1.0000 Uiso R H91 H 0.1609 0.3041 0.1601 0.0654 1.0000 Uiso R H92 H 0.1678 0.4139 0.2108 0.0654 1.0000 Uiso R H81 H 0.2501 0.4617 0.3339 0.0612 1.0000 Uiso R H82 H 0.2908 0.3762 0.3829 0.0612 1.0000 Uiso R H201 H 0.2343 0.3958 0.5991 0.0612 1.0000 Uiso R H221 H 0.3090 0.4294 0.7511 0.0770 1.0000 Uiso R H231 H 0.3840 0.5242 0.8313 0.0872 1.0000 Uiso R H241 H 0.4216 0.6238 0.7265 0.0930 1.0000 Uiso R H251 H 0.3822 0.6355 0.5407 0.0984 1.0000 Uiso R H261 H 0.3064 0.5418 0.4598 0.0833 1.0000 Uiso R H161 H 0.0940 0.2340 0.3457 0.0610 1.0000 Uiso R H101 H 0.0777 0.3655 0.0974 0.0749 1.0000 Uiso R H111 H 0.0153 0.3271 -0.0677 0.0947 1.0000 Uiso R H121 H -0.0346 0.1789 -0.0848 0.1021 1.0000 Uiso R H131 H -0.0225 0.0660 0.0599 0.1020 1.0000 Uiso R H141 H 0.0401 0.1046 0.2246 0.0854 1.0000 Uiso R H51 H 0.2946 0.1739 0.0642 0.0635 1.0000 Uiso R H41 H 0.3514 0.0680 0.0045 0.0649 1.0000 Uiso R H262 H 0.3152(8) 0.242(2) 0.3343(14) 0.056(2) 1.0000 Uiso D loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 O1 0.0499(13) 0.095(2) 0.0482(14) -0.0259(14) 0.0014(11) 0.0051(13) O2 0.0579(14) 0.0821(18) 0.0418(13) 0.0050(12) 0.0133(11) 0.0024(13) N1 0.0436(16) 0.0642(19) 0.0309(13) -0.0048(14) 0.0049(12) 0.0045(14) N2 0.0419(15) 0.077(2) 0.0390(14) -0.0138(15) 0.0087(12) 0.0061(15) C1 0.0441(18) 0.057(2) 0.0372(18) -0.0014(16) 0.0035(15) -0.0030(17) C2 0.0395(18) 0.057(2) 0.055(2) 0.0034(17) 0.0074(16) 0.0008(16) C3 0.0428(18) 0.053(2) 0.054(2) -0.0045(18) 0.0188(16) -0.0093(17) C4 0.049(2) 0.071(2) 0.0432(18) -0.0084(18) 0.0159(17) -0.0062(18) C5 0.0432(18) 0.071(2) 0.0388(19) 0.0034(17) 0.0085(15) 0.0063(18) C6 0.0411(17) 0.0439(19) 0.0369(17) 0.0023(15) 0.0105(14) -0.0043(15) C7 0.0435(19) 0.059(2) 0.0352(18) -0.0004(16) 0.0106(15) -0.0006(17) C8 0.054(2) 0.053(2) 0.0451(19) -0.0070(17) 0.0121(15) 0.0000(17) C9 0.048(2) 0.069(3) 0.0391(18) -0.0014(17) 0.0078(15) 0.0123(18) C10 0.050(2) 0.062(3) 0.058(2) -0.0053(19) 0.0021(17) 0.0043(18) C11 0.068(2) 0.090(3) 0.060(2) 0.000(2) -0.007(2) 0.003(3) C12 0.073(3) 0.104(4) 0.064(3) -0.020(3) -0.009(2) -0.012(3) C13 0.077(3) 0.082(3) 0.086(3) -0.022(3) 0.009(2) -0.018(2) C14 0.062(2) 0.079(3) 0.066(2) -0.004(2) 0.018(2) -0.004(2) C15 0.0440(19) 0.059(2) 0.051(2) -0.0087(18) 0.0112(16) 0.0053(18) C16 0.057(2) 0.059(2) 0.0427(18) -0.0013(17) 0.0158(16) 0.0092(19) C17 0.0465(19) 0.053(2) 0.0368(18) 0.0007(15) 0.0101(15) 0.0124(17) C18 0.0494(19) 0.049(2) 0.0391(18) 0.0035(16) 0.0127(16) 0.0148(16) C19 0.0498(19) 0.046(2) 0.0347(18) 0.0015(15) 0.0073(14) 0.0111(16) C20 0.060(2) 0.047(2) 0.0410(19) 0.0017(16) 0.0127(16) 0.0113(18) C21 0.062(2) 0.041(2) 0.0445(19) -0.0044(17) 0.0090(16) 0.0085(18) C22 0.072(2) 0.061(2) 0.044(2) -0.0108(19) 0.0074(18) 0.009(2) C23 0.080(3) 0.086(3) 0.052(2) -0.020(2) -0.001(2) 0.005(3) C24 0.076(3) 0.070(3) 0.082(3) -0.022(2) 0.008(2) -0.008(2) C25 0.101(3) 0.061(3) 0.077(3) -0.006(2) 0.018(2) -0.017(3) C26 0.091(3) 0.049(2) 0.053(2) -0.0027(19) 0.002(2) -0.006(2) Cl1 0.0557(5) 0.0732(7) 0.0856(7) -0.0152(5) 0.0307(5) -0.0029(5) loop_ _atom_type_symbol _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_Cromer_Mann_a1 _atom_type_scat_Cromer_Mann_b1 _atom_type_scat_Cromer_Mann_a2 _atom_type_scat_Cromer_Mann_b2 _atom_type_scat_Cromer_Mann_a3 _atom_type_scat_Cromer_Mann_b3 _atom_type_scat_Cromer_Mann_a4 _atom_type_scat_Cromer_Mann_b4 _atom_type_scat_Cromer_Mann_c _atom_type_scat_source C 0.0033 0.0016 2.3100 20.8439 1.0200 10.2075 1.5886 0.5687 0.8650 51.6512 0.2156 'International Tables Vol C 4.2.6.8 and 6.1.1.4' H 0.0000 0.0000 0.4930 10.5109 0.3229 26.1257 0.1402 3.1424 0.0408 57.7998 0.0030 'International Tables Vol C 4.2.6.8 and 6.1.1.4' N 0.0061 0.0033 12.2126 0.0057 3.1322 9.8933 2.0125 28.9975 1.1663 0.5826 -11.5290 'International Tables Vol C 4.2.6.8 and 6.1.1.4' O 0.0106 0.0060 3.0485 13.2771 2.2868 5.7011 1.5463 0.3239 0.8670 32.9089 0.2508 'International Tables Vol C 4.2.6.8 and 6.1.1.4' Cl 0.1484 0.1585 11.4604 0.0104 7.1964 1.1662 6.2556 18.5194 1.6455 47.7784 -9.5574 'International Tables Vol C 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C6 N1 C7 125.8(2) yes C6 N1 H262 115.0(12) no C7 N1 H262 116.2(12) no C7 N2 C8 128.6(3) yes C7 N2 C9 119.4(3) yes C8 N2 C9 111.9(3) yes C2 C1 C6 121.1(3) yes C2 C1 H11 120.0 no C6 C1 H11 118.9 no C1 C2 C3 119.6(3) yes C1 C2 H21 121.0 no C3 C2 H21 119.4 no C2 C3 C4 119.9(3) yes C2 C3 Cl1 120.2(3) yes C4 C3 Cl1 119.9(2) yes C3 C4 C5 120.9(3) yes C3 C4 H41 118.9 no C5 C4 H41 120.2 no C4 C5 C6 119.7(3) yes C4 C5 H51 120.8 no C6 C5 H51 119.5 no N1 C6 C5 123.2(3) yes N1 C6 C1 118.0(3) yes C5 C6 C1 118.8(3) yes N1 C7 N2 116.8(3) yes N1 C7 O1 122.5(3) yes N2 C7 O1 120.7(3) yes N2 C8 C19 111.3(3) yes N2 C8 H81 109.0 no C19 C8 H81 109.0 no N2 C8 H82 108.8 no C19 C8 H82 109.4 no H81 C8 H82 109.5 no N2 C9 C17 108.8(2) yes N2 C9 H91 109.1 no C17 C9 H91 109.6 no N2 C9 H92 110.0 no C17 C9 H92 109.8 no H91 C9 H92 109.5 no C11 C10 C15 121.2(4) yes C11 C10 H101 120.4 no C15 C10 H101 118.5 no C10 C11 C12 120.0(4) yes C10 C11 H111 120.2 no C12 C11 H111 119.8 no C11 C12 C13 120.6(4) yes C11 C12 H121 119.8 no C13 C12 H121 119.6 no C12 C13 C14 119.0(4) yes C12 C13 H131 120.1 no C14 C13 H131 120.9 no C13 C14 C15 122.0(4) yes C13 C14 H141 119.8 no C15 C14 H141 118.2 no C14 C15 C10 117.2(3) yes C14 C15 C16 118.3(3) yes C10 C15 C16 124.4(3) yes C15 C16 C17 128.2(3) yes C15 C16 H161 116.3 no C17 C16 H161 115.5 no C9 C17 C16 124.9(3) yes C9 C17 C18 116.5(3) yes C16 C17 C18 118.6(3) yes C17 C18 O2 120.3(3) yes C17 C18 C19 118.1(3) yes O2 C18 C19 121.5(3) yes C8 C19 C18 117.7(3) yes C8 C19 C20 123.5(3) yes C18 C19 C20 118.7(3) yes C19 C20 C21 130.8(3) yes C19 C20 H201 114.5 no C21 C20 H201 114.7 no C20 C21 C22 118.8(3) yes C20 C21 C26 124.3(3) yes C22 C21 C26 116.9(3) yes C21 C22 C23 121.2(4) yes C21 C22 H221 119.1 no C23 C22 H221 119.7 no C22 C23 C24 120.3(4) yes C22 C23 H231 120.1 no C24 C23 H231 119.6 no C23 C24 C25 119.8(4) yes C23 C24 H241 119.4 no C25 C24 H241 120.8 no C24 C25 C26 119.8(4) yes C24 C25 H251 119.8 no C26 C25 H251 120.4 no C25 C26 C21 122.1(3) yes C25 C26 H261 119.2 no C21 C26 H261 118.7 no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag O1 C7 1.229(3) yes O2 C18 1.234(3) yes N1 C6 1.410(4) yes N1 C7 1.371(4) yes N1 H262 0.858(17) no N2 C7 1.361(4) yes N2 C8 1.450(4) yes N2 C9 1.451(4) yes C1 C2 1.381(4) yes C1 C6 1.388(4) yes C1 H11 0.950 no C2 C3 1.377(4) yes C2 H21 0.950 no C3 C4 1.373(4) yes C3 Cl1 1.746(3) yes C4 C5 1.385(4) yes C4 H41 0.950 no C5 C6 1.389(4) yes C5 H51 0.950 no C8 C19 1.512(4) yes C8 H81 0.950 no C8 H82 0.950 no C9 C17 1.500(4) yes C9 H91 0.950 no C9 H92 0.950 no C10 C11 1.383(5) yes C10 C15 1.386(5) yes C10 H101 0.950 no C11 C12 1.368(5) yes C11 H111 0.950 no C12 C13 1.374(6) yes C12 H121 0.950 no C13 C14 1.381(5) yes C13 H131 0.950 no C14 C15 1.393(5) yes C14 H141 0.950 no C15 C16 1.472(4) yes C16 C17 1.341(4) yes C16 H161 0.950 no C17 C18 1.496(4) yes C18 C19 1.490(4) yes C19 C20 1.342(4) yes C20 C21 1.459(4) yes C20 H201 0.950 no C21 C22 1.403(4) yes C21 C26 1.380(5) yes C22 C23 1.376(5) yes C22 H221 0.950 no C23 C24 1.378(5) yes C23 H231 0.950 no C24 C25 1.366(5) yes C24 H241 0.950 no C25 C26 1.387(5) yes C25 H251 0.950 no C26 H261 0.950 no